Danio rerio (zebrafish): 30718
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Entry
30718 CDS
T01004
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1 precursor
KO
K02599
Notch 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
30718 (notch1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
EGF_2
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_DL_JAG
EGF_3
cEGF
Gram_pos_anchor
Motif
Other DBs
NCBI-GeneID:
30718
NCBI-ProteinID:
NP_571516
ZFIN:
ZDB-GENE-990415-173
Ensembl:
ENSDARG00000103554
UniProt:
P46530
LinkDB
All DBs
Position
21:complement(5645319..5713901)
Genome browser
AA seq
2437 aa
AA seq
DB search
MNRFLVKLTLLTAASLATVAQGQRCSEYCQNGGICEYKPSGEASCRCPADFVGAQCQFPN
PCNPSPCRNGGVCRPQMQGNEVGVKCDCVLGFSDRLCLTPVNHACMNSPCRNGGTCSLLT
LDTFTCRCQPGWSGKTCQLADPCASNPCANGGQCSAFESHYICTCPPNFHGQTCRQDVNE
CAVSPSPCRNGGTCINEVGSYLCRCPPEYTGPHCQRLYQPCLPSPCRSGGTCVQTSDTTH
TCSCLPGFTGQTCEHNVDDCTQHACENGGPCIDGINTYNCHCDKHWTGQYCTEDVDECEL
SPNACQNGGTCHNTIGGFHCVCVNGWTGDDCSENIDDCASAACSHGATCHDRVASFFCEC
PHGRTGLLCHLDDACISNPCQKGSNCDTNPVSGKAICTCPPGYTGSACNQDIDECSLGAN
PCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPG
YEGVFCQINSDDCASQPCLNGKCIDKINSFHCECPKGFSGSLCQVDVDECASTPCKNGAK
CTDGPNKYTCECTPGFSGIHCELDINECASSPCHYGVCRDGVASFTCDCRPGYTGRLCET
NINECLSQPCRNGGTCQDRENAYICTCPKGTTGVNCEINIDDCKRKPCDYGKCIDKINGY
ECVCEPGYSGSMCNINIDDCALNPCHNGGTCIDGVNSFTCLCPDGFRDATCLSQHNECSS
NPCIHGSCLDQINSYRCVCEAGWMGRNCDININECLSNPCVNGGTCKDMTSGYLCTCRAG
FSGPNCQMNINECASNPCLNQGSCIDDVAGFKCNCMLPYTGEVCENVLAPCSPRPCKNGG
VCRESEDFQSFSCNCPAGWQGQTCEVDINECVRNPCTNGGVCENLRGGFQCRCNPGFTGA
LCENDIDDCEPNPCSNGGVCQDRVNGFVCVCLAGFRGERCAEDIDECVSAPCRNGGNCTD
CVNSYTCSCPAGFSGINCEINTPDCTESSCFNGGTCVDGISSFSCVCLPGFTGNYCQHDV
NECDSRPCQNGGSCQDGYGTYKCTCPHGYTGLNCQSLVRWCDSSPCKNGGSCWQQGASFT
CQCASGWTGIYCDVPSVSCEVAARQQGVSVAVLCRHAGQCVDAGNTHLCRCQAGYTGSYC
QEQVDECQPNPCQNGATCTDYLGGYSCECVPGYHGMNCSKEINECLSQPCQNGGTCIDLV
NTYKCSCPRGTQGVHCEIDIDDCSPSVDPLTGEPRCFNGGRCVDRVGGYGCVCPAGFVGE
RCEGDVNECLSDPCDPSGSYNCVQLINDFRCECRTGYTGKRCETVFNGCKDTPCKNGGTC
AVASNTKHGYICKCQPGYSGSSCEYDSQSCGSLRCRNGATCVSGHLSPRCLCAPGFSGHE
CQTRMDSPCLVNPCYNGGTCQPISDAPFYRCSCPANFNGLLCHILDYSFSGGQGRDIAPP
VEVEIRCEIAQCEGRGGNAICDTQCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYFND
GKCDEQCATAGCLYDGFDCQRLEGQCNPLYDQYCRDHYADGHCDQGCNNAECEWDGLDCA
DDVPQKLAVGSLVLVVHIPPDELRNRSSSFLRELSSLLHTNVVFRRDANGEALIFPYYGS
EHELSKHKRSDWTDPGQLMQRARRSLTSFLKPRTRRELDHMEVKGSIVYLEIDNRQCFQQ
SDECFQSATDVAAFLGALASSGNLNVPYIIEAVTSEGGPPKTGEMYPMFLVLLALAVLAL
AAVGVVVSRKRKREHGQLWFPEGFKVNEPKKKRREPVGEDSVGLKPLKNSDSSLMDEQLS
EWAEDDTNKRFRFEGQSILEMSGQLDHRQWTQQHLDAADLRLNSMAPTPPQGQIENDCMD
VNVRGPDGFTPLMIASCSGGGLENENGEAEEDPSADVITDFIYHGANLHNQTDRTGETAL
HLAARYARSDAAKRLLESCADANVQDNMGRTPLHAAVAADAQGVFQILIRNRATDLDARM
HDGTTPLILATRLAVEGMVEELINCHADPNAVDDSGKSALHWAAAVNNVDAAVVLLKNGA
NKDLQNNKEETPLFLAAREGSYETAKVLLDHLANRDIADHLDQLPRDIAHERMHHDIVRL
LEEYNLVRSPPLPLSPPLCCPNTYLGIKPSPGNNNNTAKKTRKPGGKGVGGKDSGKDIRT
KKKKSGDGKNGGIMEVGVLSPVDSLESPHGYLSDVSSPPMMTSPFQQSPPISLNQLQGLA
DSHMGGALQGLGKPFDSAPRLSHLPVANNVGGAQAGACDWLQRVQQQQQQQQQQQQAGML
MPTMLSATNMPQVMGYPTMQSSHLGAPSHMIAHQNMAPMQHQNISHHFLGDLSGLDLQSS
SGHAPIQTILPQDSQRMAPPISSTQFLTPPSQHSYSNPMDNTPNHQQVPDHPFLTPSAGS
PDQWSSSSPHSNLSDWSEGISSPPTSMQMNHIPEAFK
NT seq
7317 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttcttggtgaaattaacgctactgactgcagcatcgctcgcgacggtggca
caagggcaaagatgctcagaatactgtcagaatggaggaatatgcgagtacaagcccagc
ggagaagcatcatgcaggtgtcctgcagacttcgtgggtgctcaatgtcaattcccgaac
ccctgcaacccatccccatgtcgtaacggaggtgtgtgtcggccgcagatgcagggcaat
gaagtgggtgtgaagtgcgactgtgtgttaggattcagtgaccggctctgtctgactcca
gtcaatcatgcttgcatgaactctccctgccggaacggaggaacctgctctctgctcaca
ctcgataccttcacctgccgctgccagcccggatggtcaggtaaaacgtgtcagctggcg
gacccgtgcgcctcgaacccgtgcgctaacggcggtcagtgttcagcgtttgagtcgcac
tacatctgcacgtgtcctccgaactttcatggtcagacgtgccggcaggacgtgaacgag
tgtgcagtttctccgtcgccctgcaggaacggcggcacctgcattaatgaggtgggctct
tacctgtgccgctgcccgcccgagtacaccggcccacactgccagcgcctctaccagccc
tgcctgccctcgccctgcaggagcggaggaacctgcgtgcagaccagcgacaccacacac
acatgctcctgcctgccaggcttcacaggtcagacgtgtgagcataatgttgatgattgt
actcaacacgcctgtgagaacggcggacgctgcatcgacggcatcaacacctacaactgc
cactgcgacaaacactggaccggtcagtactgtacagaagatgtggacgagtgtgaactg
tctccaaacgcctgtcagaatggcgggacatgccacaacaccatcggcggtttccactgc
gtgtgtgtgaacggctggactggcgacgactgcagcgaaaacatcgacgactgcgccagc
gctgcctgctcgcacggagccacctgccacgaccgcgtcgcctccttcttctgcgagtgt
ccacacgggcgcaccggtcttctgtgccacctggacgatgcctgcatcagtaacccgtgt
cagaaaggctcaaactgcgacacaaacccagtgagcgggaaagccatctgcacctgcccg
cccggatacactggatccgcctgcaaccaggacatcgacgagtgctcacttggtgcaaac
ccctgtgagcacggcggccgctgcctcaacactaaaggctccttccagtgcaagtgtctg
caaggctatgaagggccaagatgtgaaatggacgtcaatgagtgcaagtcgaacccctgc
cagaacgacgcaacctgcctcgaccagattggaggatttcactgcatctgcatgcctggt
tacgagggtgtgttttgtcagatcaacactgatgattgtgcatctcagccgtgtctcaac
agtggaaaatgcatcgacaaaatcaactcgttccactgcgaatgccctaaagggttttct
gggagtttgtgtcaggtggatgtggatgaatgtgccagtacgccatgtaaaaatggagct
aagtgcacagacggacccaacaaatacacctgtgaatgcaccccaggtttttctggcatt
cactgtgagctggacatcaacgagtgtgcgtcgagcccttgtcattatggtgtgtgtcgt
gacggtgtggcctccttcacctgcgactgccggcctggatacaccggacgcttgtgtgaa
accaacatcaacgagtgtctgagccaaccctgccgaaacggaggaacctgccaggacaga
gagaacgcctacatctgtacctgtcctaaaggaaccacaggtgtgaactgcgagatcaac
attgacgactgcaagagaaagccatgtgactatggaaagtgcatagacaagattaatggc
tatgagtgtgtctgcgaacccggatactcaggctcaatgtgcaacatcaacattgacgac
tgcgcgttgaacccatgccacaacggcggcacctgtattgacggtgtgaacagctttacc
tgtctgtgtcccgacggttttcgggatgccacctgtctctcgcagcacaacgagtgctcc
agcaacccctgcatccacggcagctgcctggaccagatcaacagctacaggtgtgtgtgt
gaggccggctggacgggacgcaactgcgacatcaacatcaacgagtgcctgtccaacccc
tgcgtgaacggaggaacctgcaaagacatgaccagtggatacctgtgcacatgcagagcc
ggattcagcggtccgaactgccagatgaacattaatgagtgtgcgtcgaacccgtgtctg
aaccagggctcctgcattgacgacgtggctggattcaagtgcaactgcatgctgccgtac
acaggtgaggtgtgtgagaatgttttagccccttgttcaccacgtccctgtaaaaacggc
ggtgtgtgtcgtgaatctgaggatttccagagcttctcctgtaactgtcctgctggatgg
caaggtcaaacgtgtgaggtggacattaatgagtgtgtgaggaacccgtgcactaatgga
ggagtgtgtgaaaacctgcgcggtggatttcagtgccgctgcaatcctggattcactgga
gctctatgtgaaaacgacattgacgactgcgagcccaacccgtgcagtaacggcggcgtg
tgtcaggacagggtcaatggttttgtgtgtgtgtgtttggctggttttcgaggggagcgc
tgtgcagaggacattgatgagtgtgtgagcgccccctgcaggaatggtggaaactgcaca
gactgtgttaacagctatacctgcagctgccctgcgggcttcagtggcatcaactgcgag
atcaacacacccgactgcaccgagagctcgtgttttaacggtgggacgtgtgtggacggc
atcaactcgttctcctgcgtgtgtttgccgggatttactgggaattactgtcagcatgat
gtgaacgagtgcgactctcggccatgtcagaacggcggctcctgtcaggacggatacggc
acctataaatgcacatgtccacacggctacaccggactcaactgccagagtctagtgcgc
tggtgtgactcgtctccctgtaagaacggaggctcgtgttggcagcagggggcgtccttc
acctgtcagtgtgccagcggctggactggcatctactgcgacgtgcctagtgtcagctgt
gaggtcgctgccagacagcaaggtgtgtctgtggcagttttgtgtcgtcatgcgggtcag
tgtgttgatgcaggaaacacacacctgtgcaggtgtcaggctggatacaccggcagttac
tgtcaggagcaggtggacgaatgtcagccgaacccctgccagaatggagccacgtgcaca
gactatctgggaggatacagctgtgagtgcgttcctggatatcatggtatgaactgcagc
aaggagataaacgagtgtctttctcagccctgccagaatggaggaacctgcatcgacctc
gtgaacacctacaaatgctcctgtccacgaggaacacaaggagttcactgtgagattgat
attgacgactgttctccatctgtggatccgttaaccggggagccacggtgttttaacggc
gggcggtgtgttgatcgtgttggtggttacggttgtgtgtgtccggctggttttgtgggc
gagcgttgcgagggtgacgttaacgagtgcctgtcagacccctgtgaccccagcggatcc
tacaactgtgttcagctcatcaacgacttccgctgcgagtgccgtacaggatacaccggg
aagcgctgtgagacagtcttcaacggctgcaaggacacgccatgcaaaaatggaggaact
tgtgctgtagcgagcaacaccaaacacggatacatctgcaaatgccagcctggttactcc
ggctcatcctgcgagtacgactctcagtcgtgcggctcgctgcgctgtcgtaatggtgcc
acctgtgtctccgggcacctgagccctcgctgtctgtgtgcaccgggcttcagtgggcat
gaatgccaaactcgcatggactcgccgtgcctcgtcaacccgtgctacaacggtggcacc
tgccagccaatcagcgacgctccgttttaccgctgctcctgcccggctaacttcaacggg
ctactgtgccacattctggactattcgttcagcggtgggcagggtcgggatatcgcccca
ccagtcgaagtggaaatccgttgcgaaatcgcccagtgcgaaggacgcggcggaaacgcc
atctgtgatacgcagtgtaataatcacgcatgcggatgggacggcggtgactgctctctg
aatttcgacgacccctggcagaactgtagcgccgccctgcagtgctggaggtacttcaat
gatgggaaatgtgacgagcagtgcgccaccgcgggctgtctttatgacggatttgactgt
cagaggctggagggacagtgcaatcctctgtatgaccagtactgcagggatcactatgcg
gatggtcactgtgatcagggctgtaataacgcagagtgtgaatgggacggtctggactgc
gctgatgacgtcccgcagaagctggcggtgggcagtttggttctggtggtccacatcccg
ccggacgagcttcgaaatcgctcctcatcgttcctccgcgagctcagcagcctgctgcac
actaatgtggtgtttcggcgcgacggcaacggagaggcgctaatcttcccgtactacggt
agcgaacacgagctcagcaaacacaagcgctctgattggacagatcctggtcagctgatg
cagcgtgccaggaggagtctgacatcatttttgaagccccgcacacgcagagagctcgac
cacatggaggtcaaagggtctatcgtgtatctggagattgataaccgtcagtgttttcag
cagtctgatgagtgttttcagagcgcgaccgatgtggccgctttcctcggagctctggcc
tccagtggaaacctcaacgttccctatatcatcgaggccgtcaccagtgaaggtggtccc
ccaaagactggtgagatgtaccccatgttcctggtcctgttggctctggctgttctggct
ctggccgctgtcggtgtggtcgtctccaggaagaggaagcgggaacatggccagctttgg
ttccccgagggatttaaagtcaacgaacccaaaaagaagaggagagaaccagtgggagag
gactctgtcggactcaagcctttgaaaaactcagacagctctctgatggatgaacagctg
agcgaatgggctgaagacgacaccaataaacgattccggtttgaggggcagagcattctg
gagatgagcggtcagttggatcaccgtcagtggactcagcagcatctggacgctgcagac
ctgcgcttgaactcgatggctccgacgccgccgcagggcgagatcgaaaacgactgcatg
gacgtcaatgtccgcgggcctgacggattcactccactgatgatcgcatcgtgtagcggc
ggcggtcttgaaaatgaaaacggcgaagcagaagaagatccgtccgctgacgtgatcaca
gattttatttatcacggagccaacctgcacaatcagacagaccgcacaggcgagaccgca
cttcatctggcagcacgatacgctcgctcggatgctgctaaacgtctgctggagtcgtgc
gccgatgctaatgtgcaggataacatgggccggacaccgctgcacgccgccgtcgctgct
gatgcacagggagtcttccagatcctcattcggaaccgagcgacggatctagacgcccgc
atgcatgatgggacgacgccgctgattctggccacccgattggctgttgagggaatggtg
gaggagctcattaactgccatgcagatccgaatgctgttgatgattcaggtaaatcagct
cttcactgggcggctgctgttaataatgtggatgctgctgtcgtgctgttgaagaatgga
gctaataaagatctgcagaataataaggaggaaacgcctcttttcctcgctgctcgtgag
ggaagttacgaaacggctaaagtcctgcttgatcacttggccaatcgggatattgcagat
cacctggaccagctgccccgggacatcgctcatgagcgcatgcaccacgatatcgtgcgt
ctgttggaggaatataaccttgtccgaagccccccgctacccttatcacccccgctctgc
tccccaaacacatacctgggcatcaaacccagcccaggaaacaacaacaacacggctaag
aaaacacgcaaacccggaggaaaaggtgttggagggaaagacagcgggaaggacatcaga
accaaaaagaaaaagagcggagatggcaaaaacggcgggattatggaagtgggcgtcctc
tcgcctgttgattcgctggagtctccacacggctacctatcagacgtctcgtctccgccc
atgatgacatcacccttccagcagtctccgcccatcagtttaaatcagctccagggattg
gccgactcccacatgggtggagctcttcagggtttagggaagccttttgactccgcccct
cgtttatcccatctgccggtggccaacaatgtgggtggagctcaagcaggcgcttgtgat
tggctgcaaagggtgcagcagcagcagcaacaacaacaacaacaacagcaggcaggcatg
ctaatgcctacaatgctctctgctactaatatgccacaagtcatgggctatcccaccatg
caaagcagccatcttggtgcaccgtcacacatgatcgcccatcaaaacatggcgccaatg
cagcaccaaaacatctcgcatcacttcctcggggacctcagtgggctggatcttcagtca
agctcaggacacgcccccattcagaccatcctaccgcaggacagccagcgcatggctccg
cctatttctagcacgcagtttctgactccgccttctcagcatagctattctaaccctatg
gacaacacacccaatcaccagcaggtcccagaccacccgttcctcacaccctcccccggg
tctcccgaccaatggtccagctcatctccacattccaacttgtctgattggtcggaagga
atctcgagcccgcccaccagtatgcagatgaaccatattccagaggctttcaagtag
DBGET
integrated database retrieval system
