Danio rerio (zebrafish): 30721
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Entry
30721 CDS
T01004
Symbol
pdx1
Name
(RefSeq) pancreas/duodenum homeobox protein 1
KO
K07594
insulin promoter factor 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
30721 (pdx1)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
30721 (pdx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
30721
NCBI-ProteinID:
NP_571518
ZFIN:
ZDB-GENE-990415-122
Ensembl:
ENSDARG00000002779
UniProt:
Q6DC85
LinkDB
All DBs
Position
24:25564785..25567293
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AA seq
246 aa
AA seq
DB search
MNREEHYYPPNHLYKDSCAFQRHPNEDYSQNPPPCLYMRQAHSVYASPLGAQDQPNLTDI
TSYNMSSRDDLAGPHLHLPQTSQTSLQSLGGYGDSLDLCGDRNRYHLPFPWMKSTKSHTH
AWKGQWTGPYMVEAEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELALTLSLTERH
IKIWFQNRRMKWKKEEDKRRARGVDPEQDSSITSGDLKDESCVGTATLAGPPSPLHPHAP
SVQQDS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgggaagagcattactatccgcctaaccacctgtacaaggactcttgtgccttc
cagagacaccccaacgaagactacagccaaaaccctccaccgtgtctttatatgagacag
gcacattcagtatacgcctcaccattgggcgcacaggaccagccaaatcttaccgacatt
acttcttataacatgtcgagccggtatgatctggcagggcctcatcttcaccttccccaa
acttcacagacatctctacagtcgctcgggggttacggagactctctggacctctgcggg
gatcggaacagataccatctcccatttccgtggatgaagtcaaccaaatctcacacgcac
gcatggaaaggacagtggacaggcccttatatggtcgaggccgaggagaacaagcgcacg
cgcacagcttacaccagagcgcagctgctcgagctcgagaaagagtttctcttcaacaaa
tacatctcgcgcccgcgccgcgttgaactcgcactcaccctcagcctcaccgagagacac
atcaagatctggtttcagaaccgacgcatgaagtggaaaaaagaggaggacaagaggaga
gccaggggagtggatcccgaacaggactcctccatcacgtccggggatcttaaggatgaa
tcttgcgtcggcacggcaacacttgcgggacccccttcccccctgcacccgcatgcacct
tcagtccaacaagactcttaa
DBGET
integrated database retrieval system
