KEGG   Danio rerio (zebrafish): 30722
Entry
30722             CDS       T01004                                 
Symbol
rack1
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    30722 (rack1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    30722 (rack1)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     30722 (rack1)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   30722 (rack1)
  Exosomal proteins of colorectal cancer cells
   30722 (rack1)
  Exosomal proteins of bladder cancer cells
   30722 (rack1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_SPT8 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_IFT140_1st eIF2A Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_WDR75_2nd Cytochrom_D1 PROPPIN Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 30722
NCBI-ProteinID: NP_571519
ZFIN: ZDB-GENE-990415-89
Ensembl: ENSDARG00000041619
UniProt: O42248
Structure
LinkDB
Position
14:6946681..6953678
AA seq 317 aa
MTEQMTVRGTLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR
GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA
NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDTINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaccgagcagatgacagtaaggggtaccctgaagggtcacagcggatgggtcacccaa
atcgccaccacaccccagtttcccgacatgattctgtccgcgtcccgggacaagaccatc
atcatgtggaagctgacccgtgacgagaccaactatggcatcccccagcgtgctctgagg
ggccattcccactttgtgagtgatgttgtaatctcatctgatggccagtttgctctgtct
ggatcctgggacgggaccctgcgcctgtgggatctcacaactggcactaccacccgccgc
tttgttgggcacaccaaagatgttctgagcgtggctttctctgctgacaaccgtcagatc
gtgtctggatccagagacaagaccatcaagctgtggaacactctgggagtctgcaagtac
accatccaggatgacagccacactgagtgggtgtcctgtgtgcgcttctctcccaacagc
agcaaccccatcattgtgtcctgcgggtgggataaaatggtcaaggtatggaatttggct
aactgcaagctgaagaccaaccacattggccacaccgggtacctgaacacagttaccgtg
tctcctgatggatctctgtgtgcctccggtggaaaggatggacaggccatgctgtgggac
ctgaatgagggcaagcacctttacacgctggacggtggtgacaccatcaacgccctgtgc
ttcagccccaaccgctactggctgtgcgctgccactggacccagcatcaagatctgggat
ctggagggcaagatcattgttgatgagctgaggcaggacatcattaccaccaacagcaaa
gctgagccgcctcagtgcacatctctggcctggtctgctgatggacagactctgtttgct
ggctacactgacaacctgatcagagtgtggcaggtgaccatcggaaccagataa

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