Danio rerio (zebrafish): 317641
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Entry
317641 CDS
T01004
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
317641 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
317641 (zcchc7)
03016 Transfer RNA biogenesis [BR:
dre03016
]
317641 (zcchc7)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
317641 (zcchc7)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
317641 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
317641
NCBI-ProteinID:
NP_001288287
ZFIN:
ZDB-GENE-030102-2
Ensembl:
ENSDARG00000055443
UniProt:
F1QLY2
LinkDB
All DBs
Position
1:complement(23180320..23287530)
Genome browser
AA seq
627 aa
AA seq
DB search
MFLWSPEASSVPCCKSEFINRALLEMFSGFQERYDHEDELYRDEEDSSGLSDSDSELEFR
LYSQLHYNAEFQENHEESSKVQPLVPQTQLQPETMPPAPPVDVIVIDSGPDSFTVSDSTE
DDESVCANKVQSLKHCKRKSQPSRFRSPSPPQVQAGRSSPDDVVVLDSDLEQSSSESEPP
FVEDLDSDTDSDSDSDGLENWMILGKGRQDEDQSIQLNLAQSSFVNTEYVNYRGQEQKWT
VSEKDKQAQIYNKGHGPRHVPNRSTYRYYTEKSITCRNCNKTGHLSKNCPTLKKVPCCSL
CGLRGHLLRTCPNRHCSNCSLPGHTSDDCLERAFWYKRCHRCGMTGHFIDACPQIWRQYH
LTTTAGPIRKSADPKACQKRAYCYNCSRKGHFGHQCSQRRMYNWSYPSLPVITYYDTVND
IKCRDFRLKKKAREMQDAGLISPDGGVVTFTPQPPRKKQKVSHSPHPYSNNTNNHHTPKK
RIAHTPKHNPQTNQQNTHWRVKQNSKKPGPHGKNTPQSKEFKSQNKEAKNKKRKKKKAAV
IDEDADFPRGSKKSPHKAGFHSSTQKANVKPVKLFGVEKNHMKKKDKSKKKERIQRKRQQ
KAAKDSAAYPTDENLFQIKQRKVKRSK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtggagtccggaagccagtagtgtcccgtgttgcaaatcggaatttataaac
agggctctccttgagatgttctcagggttacaggaacggtacgaccatgaggacgagctg
tacagggatgaagaagactcatcaggtttgtctgattcggacagcgagttggaattccgg
ctttattcccagctgcactacaacgcagagttccaggaaaaccatgaggaatcaagcaaa
gtccaaccattggtcccacaaactcaacttcagccggaaaccatgcctcctgctccacct
gtagatgttatcgtgattgactcagggccagattcttttacagtgtcagacagcacagag
gatgatgagagtgtgtgtgctaataaagttcagtcattaaaacattgtaaaaggaagtca
cagcccagtcgcttccgttcaccttctccgcctcaggttcaagcaggaaggagctctcca
gatgatgttgtggtgctggattctgatttagaacaatcctcttctgaatctgaacctcct
tttgtggaggatttggactcggatacagactctgattcagactctgatggactggagaac
tggatgattctgggcaaggggagacaagatggagatcagagcatccagctgaacctcgcg
cagagtagttttgtgaatacagaatatgtaaattacagagggcaagagcagaagtggact
gtatcagaaaaggataaacaggctcagatctataataaagggcacggcccgaggcatgtc
ccaaaccgctccacatacagatactacactgaaaaatccatcacgtgtcgcaactgcaat
aagactggtcatctctccaaaaactgccccacattaaagaaggtgccgtgctgctcatta
tgtgggcttcggggacacttactgaggacctgtccaaaccgtcactgctcgaactgttcg
ctgcccggccacacctctgatgactgtctggagagagccttttggtacaaaagatgccac
cgctgcggcatgaccggacacttcatcgacgcctgtccacaaatctggagacagtaccac
cttacaaccactgcaggacccatccgcaagtctgctgatccaaaggcctgccagaaacgt
gcctattgttataactgctccaggaaaggacactttggccatcaatgctctcagagaagg
atgtacaattggtcctatccatccttgccagttatcacctattatgacacagtgaatgac
atcaaatgccgggatttccgtctgaaaaagaaggccagagaaatgcaggacgccggactg
atttctcctgatggaggcgttgtaacatttacccctcaaccacccagaaagaaacaaaaa
gtcagccacagtccacatccgtactcaaacaacacaaacaaccaccacacaccgaagaaa
cgcatcgcacacacacccaaacacaatccacaaacaaaccaacaaaacacacactggagg
gtcaagcagaactccaaaaaaccaggaccccacggcaaaaacacccctcaaagcaaagag
ttcaaatctcaaaataaagaagccaagaacaagaaaaggaaaaagaaaaaggctgcagtt
atagatgaagatgccgactttcccagaggttccaaaaagagccctcacaaggcaggtttt
cattcgtcaactcaaaaagccaatgtgaagccagtgaagctgtttggagtggagaagaac
cacatgaagaaaaaagacaagtcgaaaaagaaggagaggatacagagaaagagacaacaa
aaagcggctaaagattctgccgcgtatcccactgatgaaaacctcttccagattaaacaa
agaaaggtaaaaagaagtaaatga
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