Danio rerio (zebrafish): 321298
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Entry
321298 CDS
T01004
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dre00535
]
321298 (col14a1a)
Proteoglycans [BR:
dre00535
]
Extracellular matrix (ECM) proteoglycans
Others
321298 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
FN3_Tor_3rd
VWA_3
Arylsulfotran_N
DUF4767
Motif
Other DBs
NCBI-GeneID:
321298
NCBI-ProteinID:
XP_009290436
ZFIN:
ZDB-GENE-030131-9889
Ensembl:
ENSDARG00000005762
UniProt:
A0A8M3AIZ5
LinkDB
All DBs
Position
16:14707867..15050844
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AA seq
1879 aa
AA seq
DB search
MQVSGSRIKLWCPLISLALIQFLAPVSAQVPAPRRLRFKVVSAGKLLVSWKEPKGEYNGY
RFIYNTEPGGETSELQIAKGVNKAIIKEFNPRKEYSVKVIAVSGNLQSRALQGKYTEDQS
SDGEITQPQRLKEPGAVEEGNEISAVDQFVCTTPAIADIVILVDGSWSIGRINFRLVRMF
LENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNGFSTKEAVIDAVKNLPYKGGNTLTGLA
LTYVLENSFKPESGARDNIPKIGILITDGKSQDDVISPAQTLRSSGVELFAIGVKNADEN
ELKAIASEPEDTHVYNVADFSIMGTIVEGLTRTVCDGVEQQDKEIKQDSVPEETVSTPLN
LLISEVTAHSFRVSWTHSAGKVEKYRVVYHPTDADIPEEIVVGGLENSVVLQNLNSLTEY
EIAVFAVYRSAASDALRGSEITQALPTVSDLELYDVTDSSMRARWRDAEGASGYMILYAP
LSSDTPDERELKVDETVTDVELTGLIPDTEYTVTVYATFGEEASDPATVQETTMSLKPPR
NLRVTEVDHSSVRLNWDSASSKVKGYQVIYVKTDGVQTNQVELGPVTNVYLKNLSPLTEY
TVAVFAVYDGGQSEALSGGFSTKLVPAPFSLMTSDVTSESFQVSWSHPARDVVLYKLIWS
PTAGRDEREVMLAGDTDSYVIQDLSPFTEYKVSLAAIYKDETESSPVVVLEYTLGWTTEF
PTTIPTTTPIFHQGVTNLWIDEETPFSIQVNWEVQDSDVDQYKVTYVSTDRTEETVLVSG
NRRNVVLQPLLSDTKYKITVTPVYADEESSQLSMSSFGTTLPLSGPSNLRVSDEWYNRFR
ISWDSPQFPTMGYRVIYQPISVSGRALETFVGDDVNTLLILNLLSDTEYSVQVIASYTTG
SSQPLTAKGKTLFLGVRNLNTYQVLSSSVCAQWQPHRHASVYRVVIESLHNGQKQEVRVG
GGASRECFFRLSPNTQYKISVYTVLQDTEGPAVTTMVTTALAPTQPPTAAPTTSPPPTIP
PAKEVCKAAKADLTFLVDGSWSIGDDNFQKIIRFLYSTTGALDVIGPEGTQVAIAQFSDD
ARTEFKLNSYSDKEALLDAVQRISYKGGNTKTGRAIKHVKEAIFSEDAGVRRGIPKVLVV
LTDGRSQDDVNKISKEMQMEGYIIFAIGFADADYGELVNIASKPSERHVFFVDDLDAFKK
IEEQLITFVCEAATATCPSVLMSGNTLAGFRMMEMFGLAEKHYSSVQGVSMEPGTFNSFP
CYRLHKDALVSQPTRYLHPEGLPSDYTISMLFRILPETPQEPFALWEILDKNNEPLVGII
LDNGGKTLTFFNSDYKGEFQTVTFEGPEIKKIFYGSFHKLHVAISKTAAKVVIDCKTVGE
KSINAAGNISIDGVEVLGRMVRSRGRKDNSAPFQLQMFDIVCSTSWASRDKCCELPGLRV
EEDCPAMPHACTCAQDSKGPPGPSGPPGGPGIRGSRGDRGEPGLTETAGHSHFVSAARLV
GSQGLPGEIGPPGPQGPPGPQGPNGLSIQGPPGAPGEKGDKGEIGLPGPQGVPGANGGPG
RDGPPGQRGLPGKDGPQGRQGPPGPMGSPGAPGAPGSNGPPGQLGDQGPPGPAGTKGERG
ERGDMQSHAAVRAIARQVCEQLIQSHLSRYNSILNQIPSQSVSVRTVPGPPGEPGRPGLQ
GPQGEQGPPGRPGFPGASGQNGRPGERGLPGERGEKGSPGVGTQGPRGPPGSPGPAGEGR
TGSQGPPGRPGIQGTQGRPGTPGSPGPAGPPGYCDQNSCLGYNVGVQQLSSNPYQNYGPA
TNYNPEDEEEDDPYGGYRAYPPQYYQPSYPDPRGARPGPVHPGDTAGMRAPGARRFTRST
AEEGIVHQPQEHVKEEELW
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgtcgggatccaggattaagctgtggtgtccgcttatctcgctggcactgatt
cagtttcttgcccctgtttcagctcaagttccagctccaagaagacttcgatttaaagtt
gtgagtgcaggaaagcttcttgtctcatggaaagaaccaaaaggagaatataatggctac
agatttatatataatacagaaccaggaggggaaacaagcgagctgcaaattgcaaaggga
gtgaataaagcaataataaaggagtttaatcccaggaaggagtattcagtcaaggttatt
gcagtgagtggaaacctgcagagccgagcacttcagggaaaatatactgaagaccagagc
agtgatggagaaatcactcaaccacaaagactgaaagaacctggagctgtggaagagggc
aatgagatctcagcagtagatcagtttgtctgcacaactcctgccatcgcggatattgtc
atcctggttgatggatcttggagtattgggcgaatcaatttccgtctggtccgcatgttc
cttgaaaacctggtcaacgcctttgatgtgggaatagacaaaaccaggattggtctggcc
cagtacagcggagatccacgaattgagtggcacttgaatggcttcagcacaaaagaagca
gtaatagatgctgtcaaaaacctgccgtacaagggaggcaacactctcacgggtctcgct
cttacatacgtactggagaacagcttcaaacctgaatcaggtgctcgtgacaacattccc
aaaattggtatcctgataactgacggcaaatcgcaggatgacgttatctctcctgctcaa
accctgagaagttctggagtggagctgtttgccattggtgtgaagaatgctgatgaaaat
gagctgaaggccattgcgtctgaaccagaggacacacatgtttataatgtggctgacttc
agtattatgggcaccatagtggaaggtttgaccaggacggtgtgtgatggagtggagcaa
caggacaaagaaattaaacaagattctgtccccgaggagactgtgtcaactcctctgaac
ctgctcatttctgaggtgacggcacacagtttccgagtgtcctggactcattcggctggc
aaggtggaaaagtatcgtgtggtttaccatccgaccgatgcagacattccagaagagatt
gtggtgggcggtttggagaattctgtggtcctgcagaacttgaactctctgactgaatac
gagattgcagtgttcgctgtgtatcgcagcgcagcgagtgatgctctcagaggcagcgag
atcacacaggctctgcccacagtgagtgatttggagctgtacgatgtgacagacagcagc
atgagagcccgctggagggacgcagaaggggcttctgggtacatgatcctgtacgctccg
ctgagcagcgacactccagatgaaagagagctgaaggtggatgagacggtgactgatgtg
gagctgacagggttgattcctgacacagagtacaccgttacggtctatgccactttcgga
gaggaggccagtgaccccgccactgttcaggagaccaccatgtctctgaaacctccacgt
aacttgcgggtcactgaggttgaccacagctctgtccggctcaactgggattcagcatcc
agtaaggtgaaaggatatcaggttatctatgtcaaaacagatggtgtccagaccaatcag
gtggaattaggtccagtcactaacgtgtatctgaagaacctgtccccattaacggagtac
accgtggcagtgtttgctgtctatgatggcggccaatcagaagctctcagtggcggattc
tccacaaagctggtgccagcgccgttcagcctgatgacatcagatgtgacctcagagagt
tttcaagtgagttggtcacatccggccagagatgtggtgctctataagctgatttggtca
ccaactgctggaagagatgagagagaggttatgctggctggagacacggactcatatgta
attcaagacctgagtccttttacagagtataaggtgtcactggcagccatctataaagat
gaaaccgagagcagccctgtggttgtgctggagtacacattgggctggaccacagaattt
ccaaccaccattcccaccactacaccaatttttcaccagggtgtgactaacctgtggatt
gacgaggagacccctttcagtattcaagtcaactgggaagtgcaggactctgacgtggac
cagtacaaagtgacatacgtcagcacagaccgaacagaggagacagtgttagtctctggg
aacagaagaaacgtggtcctgcaacctctcctctcagacacaaaatacaagatcacagtg
acccctgtttatgcagatgaggagtctagccagctgtccatgtcttcattcggcacaaca
ctgccactttctggccccagcaacctcagggtgtctgatgaatggtacaatcgcttccgc
attagctgggacagtcctcaattccccaccatgggttacagagtcatctatcagcccatc
tctgtgtcaggtcgggctctggagacatttgtcggagatgatgtaaacaccctgctgatc
ctcaatctgctgagtgacacagagtacagcgttcaggtcatcgcctcctacaccaccggc
tccagccaacccctcaccgccaagggcaaaacattgtttcttggggtgaggaatctgaac
acataccaggttctcagcagcagtgtgtgtgctcaatggcagcctcaccgtcatgcctcc
gtctacagagtcgtcatcgagtctctgcacaacgggcagaaacaggaggtgagggtcggt
ggtggtgcgtccagagagtgtttcttcagactttcccccaacacccagtacaagataagt
gtatacaccgttttacaggacacagagggccctgctgtcaccaccatggtcaccactgct
ctggcacccactcagccaccaaccgcagcacccaccaccagccctccacccacaatccct
ccagccaaagaagtttgcaaagcagctaaagcagacctgaccttcctagtcgacggctcc
tggagtatcggagatgacaactttcagaagattatccgcttcctgtacagcactactggt
gcacttgatgtgattggcccagagggaacacaggtggccattgctcagttcagtgacgat
gccaggactgagtttaagctcaactcctacagtgacaaagaggctctgctggatgccgtg
cagcgcatctcctacaagggaggaaacactaagacaggtcgagccatcaagcatgtcaag
gaggccatcttttctgaggatgcgggtgtgaggagaggcatcccgaaagtgctggttgtg
ctcaccgacggccgctctcaggatgatgtcaacaagatctccaaagagatgcagatggag
ggctacatcatctttgccattggcttcgctgatgcagactatggggagctggtgaacatc
gccagtaaacctagcgagagacatgtgttctttgtggatgatctggatgccttcaagaaa
attgaagaacagctcataacttttgtttgtgaggctgcgactgccacttgcccctcggtg
ttaatgagtgggaacactttagctggcttccgtatgatggagatgttcggtctggctgag
aagcactacagcagtgtacaaggtgtttcgatggagcctggcactttcaacagcttcccc
tgctaccgacttcacaaagacgcactagtctcgcagcctaccaggtatctacatcctgaa
ggcctcccatctgactacactatatctatgctctttcgcattctgcctgaaacacctcag
gagccttttgcattatgggaaatcctcgacaaaaacaatgagccacttgtgggcattatc
ctagataacggagggaaaacattaaccttcttcaattctgactacaagggagaatttcaa
acagtgacttttgaaggacctgaaattaagaagattttctatggcagttttcataagctt
catgtggccatcagcaaaactgctgctaaagtggtgatcgactgcaagacggttggagag
aaatccatcaatgccgcagggaacatcagcattgatggagtggaggttctagggcgaatg
gtccgatcacggggacggaaagacaattcagcaccgtttcagctccagatgtttgacata
gtctgcagtacatcatgggccagtcgggataagtgctgtgaactcccgggattgagagta
gaagaggactgtcctgccatgccccatgcttgcacctgtgctcaggacagcaaaggacca
cctggaccctctggaccaccgggcggtcctggtatcagaggttcaagaggagatcggggg
gagccaggcctgacggagactgcagggcattcacactttgtttcagcagctcggctggtg
ggatctcaaggactgcctggggagatcggaccacctggaccacaagggcctccgggtcct
cagggaccaaatgggctgtccattcaagggccaccaggggctccgggagagaaaggagac
aagggtgaaataggtctgccaggtcctcagggcgtaccaggtgccaatggaggacctggc
agagatggacctccaggacagagaggcctacctggtaaagatggaccccaaggacgacag
ggcccaccaggaccaatgggtagccctggggctcctggggctcctggatcaaatggacca
ccaggtcaattgggggatcaagggccacctgggcctgccgggactaaaggcgaacgcgga
gagagaggtgacatgcagtctcatgccgctgttcgtgcaatagctcgacaagtttgtgaa
cagcttattcagagtcacttgtctcgctacaactcgatcctgaaccagattcccagtcag
tcagtttcagtacgaacagtaccaggtccgccaggtgagcccggtcggccaggacttcag
gggccacagggagagcagggtcctcctggcagaccaggattccctggagccagtgggcaa
aacggccgcccaggagagagaggtcttccaggagaaaggggagagaagggcagcccaggt
gtggggacacaaggccctcgtggtcctccaggatctccagggcctgctggagaagggcga
acaggaagccagggtccaccagggagacctggaattcaaggcacccaaggacgtccaggt
accccaggcagtcctggtcctgctggaccgcccggctactgcgaccagaactcctgcctc
gggtacaatgttggagtacaacagttgtcctccaatccctaccaaaactacggccccgcc
accaactacaaccctgaggatgaggaggaggatgacccttatggcggctaccgggcctac
cctcctcaatactaccaacccagctaccccgacccccgtggcgccaggcctggccccgta
caccctggtgacacggcgggcatgagggcacccggcgcacgccgcttcacccgcagcaca
gctgaagagggcatcgtccatcagccgcaggagcatgtgaaggaagaagagctgtggtga
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