KEGG   Danio rerio (zebrafish): 321362
Entry
321362            CDS       T01004                                 
Symbol
tnrc6ba
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    321362 (tnrc6ba)
   03036 Chromosome and associated proteins [BR:dre03036]
    321362 (tnrc6ba)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     321362 (tnrc6ba)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    321362 (tnrc6ba)
SSDB
Motif
Pfam: TNRC6-PABC_bdg Ago_hook RRM_occluded RRM_1
Other DBs
NCBI-GeneID: 321362
NCBI-ProteinID: XP_021329911
ZFIN: ZDB-GENE-030131-13
Ensembl: ENSDARG00000074161
UniProt: A0A8M9Q4Q9
LinkDB
Position
12:19281184..19301976
AA seq 1984 aa
MEDKKRKKEDKRKRETSQKVAEQKNKVPELTKPPSAQSPAAPNSASPSPGPVPSSTPSAA
TPAAGTLPQGGNNAKRPAVANGQPSPSTPNSQRYMPREVPPRFRCQQDHKVLLKRGQPPL
SSMLLGGGNSGGDSPNETVASASDPSQGPVGPAAPSLPHTSSASSIAASSSSNYANSMWG
TSSGSHPLSQGREKVIVDRSDLEEWPSIAAGDGSKSGDAAGTGGTDSGAILNCNASWGER
HLQQQAKVVGGGNGRKGVNSGSPSPPTSSGSPNECMQSGSVWASSSHELIGGNAVAAGSL
PPISKAAPLPGSSDSSFGVSCGIPGANFTPNANPSAWPALVQEGAGTVATEGGSSSLQSS
SLSASNPLSVNQASHQHQLHQMQSRDREPSCGEWGGTALEPGAGPKNTGVTEGADMDSGS
TGGGAGSASSSSSTSSSLWRTQPFPANFKTGASRTESWDDGAGGSSLSAEGGKAWGYPGQ
DDRGDLTGAGAWGTGSGGQTPGVSQGAWGGDHLLGGEWGASSGVGGVSDQGGKDGSSSNS
SSSGGSVSIPTTTSSTPSTMTRAWDNQKAVGDVGAGDLSEWGGQGSRGGEGTSSSSGGGN
SRSGNQRHGHHRTHKPPDPEVALQDLLSRSDLDPRVLSNTGWGQTQIRQNVAWDLEDGGR
AKAPGGANSLSIGASAHAQPYSGPSGSTTTDPSSPSLLQAASLNANLNSNSILGPPAVSS
GEGWDNSSSNSSSLHTRGPPPSGVNIQNPSVSQSGGGGGSSAGGQGMPSGGWGGTASSEG
QVKGWESEGHEWRERRAGGSSGGWGDFQTQGTPSTGGSGWGDSQEEKGTRSSGWKEMGRV
DAGSWGPRGTSDWGEKESKSCSGGWDGKGGGGTSGDSEVGTWGNWDDGTPGGTWGGVGGD
MGGKSHQGWGGKMHPSQMPNSQSASQKGPAQQQQQPQSQPQQCQSVDTGAMQGGWGRPAG
PSVQSQSSGWNSGPIPQISNGPGETSEPSGWEEPSPQSISRKMEIDDGTSAWGDPSNYNY
KSVNLWDKNNAPSGQAQSVSPQQGPPPLQQPPPGRMPTGLGNRDMNIAHSASKGPGIASG
WGGRGSPSSPCVDNGTSAWGKPTEAPTGWDDSGKASSWGDPSSNPVKSGSKSMQEGWVEG
EGSVSASRNPSWEEEDESGGVWNSAGSQGSSSSYNSGGWGAKKGNKGSLKGAGDSWMNPM
SRQFSNMGILGEDAGGRSLDLAPGPPQDKKMEGEKRGMGLNEYNGEMRKGGRGGGAGAVF
RSPGSKEVGACEPGPYYDKASGQLFSSGGGMAQSRHQPGVPPINPSVRAQVPHQFLSPQV
PGSVLKQMPPPSGGVGGGIFPPQLSPQHIAMLSSIYPPHLQFQLACQLLLQQQPQQQQQQ
QLLQNQRKFPPNIRQQADPQQLARIMAVLQQQRQQQQHVGGTGGSSKLSPSHLGGSGPKM
PMSDPLSHPGLAGSVADIHQKTQGAYSGFGPGMSLSGLELGPMVGGPAGLKDSGGQQSRF
KWMMEGHSPAPSPPDSTLHKNGPIAAPLKMRGGSPYSQYEMLGGGEGLGVPPQGPSDHWH
RSPGNKMGTKTGTSSWPPEFQPGVPWKGRPNVDTDSDPYMTPGSMLGSSMSSLNDTEHQL
LRDNTESNPSLNTLLPSPGAWPYSASESPLTNAHNPAKYTDYKPSWPPEPIGHNKPWKTN
RNNSHLPRPPPGLTHQKQPSVSPWTSGGPRVGRGWGGSGGSQENRFGPGSAWSDGGASKG
SCWLVLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIRYSSRQEAAKAQSALHMC
VLGNTTILAEFVSEEEVARYFAHSQAGAAGSGSGGSGAGGVAVSGPAGVAGSSGAGAVGT
ISAASGDRERAAVGSLTAGGSSNSGGTGPSGSTWQSLDGTGSSSDPASAQGAGLSIFAQW
SSNGAGGSNAAGVDPGRAGLWGGMTPGYTGSSLWASPAMEDRHQMNSPAALLPGDLLGGG
ADSI
NT seq 5955 nt   +upstreamnt  +downstreamnt
atggaagacaagaaaaggaaaaaggaagataaaaggaaacgggaaacctcgcagaaggtt
gcagagcaaaaaaataaagtgccagaattgaccaagcctccatctgcacagtctcctgcc
gcccccaactcagcttcccccagccctggccccgtcccctcttcaaccccatccgctgcc
accccggctgctggcaccctccctcagggtgggaacaatgctaagcggccggcggtggcc
aacggacagccctcccccagcacaccgaattctcagcgctacatgccccgtgaagtgccc
cctcgattccgttgccagcaggaccataaagtgctactgaagaggggccagccaccactg
tcctccatgctgctggggggaggcaacagcgggggagacagccccaatgaaacagtggct
tctgcctcagatccaagccagggccctgtgggtccagctgctccctcactgccccatacg
tcatccgcctcatcaatcgctgcttcttcttcttcaaattatgcaaattccatgtggggg
accagctctggcagccatcccctctctcagggcagggaaaaggtgatagtggaccggtca
gacctggaggaatggcccagtattgctgctggggatggatcaaagtcaggggatgcagca
ggtacaggaggtacagacagtggtgcgattctgaactgcaatgcctcgtggggtgagagg
catctccagcagcaagcgaaagttgtgggaggagggaacggaaggaaaggagtcaattct
ggcagtccctctccgcccacatcctctggatcacccaatgaatgtatgcagtctggtagt
gtttgggcttcatcctcccatgaactcataggggggaatgcagtagcagcaggctcattg
ccccccatatccaaagctgcccctctcccagggagctctgatagctcctttggtgtcagc
tgtgggattccaggtgccaattttacccctaatgccaatccctctgcttggccagcccta
gtacaggaaggggctgggacagttgcaacagagggtggctcctcttccctccaaagctca
tctttgtctgccagcaaccctctttctgtgaatcaagcctctcatcagcaccaacttcac
caaatgcaatccagagacagagagccatcctgtggagaatggggtggcacagcactggaa
ccaggagcaggaccaaaaaacactggggtgacagagggggctgatatggactctggaagc
acaggtggaggagcaggctctgcttcgtcttcctcctccaccagctcatcattgtggaga
actcagcctttccctgcaaacttcaaaacgggtgcctcaaggactgaatcttgggatgat
ggagcaggagggagctccttgtctgctgaaggtgggaaggcatggggatatcccggccag
gacgatcgaggagatttgacgggggcaggtgcctggggaacaggaagtgggggtcagacc
cccggggtatctcagggagcgtggggtggggaccatttgttgggtggggaatggggggca
tccagtggtgttggaggtgtcagtgatcaaggtgggaaagacggctcaagcagtaacagc
agcagtagtggtggtagtgtcagcatcccgacgacaacctcctccacaccttcaactatg
acaagagcttgggacaatcagaaagcagttggggatgtgggagcaggagatttgagtgag
tggggaggccagggtagcagaggtggggaaggtacctcatcctccagtggtggaggaaac
tccagaagtggcaatcagcgccatggccaccaccgcactcataagcctcctgaccctgaa
gtggccttacaggatctgcttagccggtcggatctggaccccagagtgctgtccaatact
ggttggggtcagacacaaatccgtcagaatgtggcatgggatttggaagatggaggcaga
gcaaaagcacctggtggtgcaaattctttgtctattggtgcatctgctcatgcccagcca
tactctggtcctagtgggagcacaactactgatccatcttccccctctctgctccaagct
gcatctctaaatgccaacttaaactcaaactccatccttggaccacccgcagtttcatct
ggtgaaggttgggacaacagtagtagcaacagcagttctttgcatacccgaggccctcca
ccctcaggtgtcaatatccaaaaccctagcgtctcacaatctggaggtggaggaggtagc
tcagctggtgggcagggcatgccatctgggggttggggagggactgcatcatcagaaggc
caagtaaagggctgggaaagcgagggacatgagtggcgagaacggcgagcaggaggttcg
tcaggtgggtggggagatttccaaacacagggtactccatcaacaggaggaagtggctgg
ggagatagtcaggaggagaaaggaacaagatcaagtggatggaaagaaatggggagggtg
gatgcaggcagctggggaccgagaggtaccagcgactggggagaaaaagagtctaaatcg
tgtagtggggggtgggatggaaagggtggtggaggtactagtggagactcagaagtgggt
acatggggtaattgggatgatggaactcctggagggacatggggaggggtgggtggagac
atgggtggaaaatctcaccaaggttggggtgggaagatgcacccttcacaaatgccaaac
agccaatcagcctcacagaaaggcccggcacagcagcagcagcaaccacaatcacagcct
cagcagtgtcagtcagtggacacaggggccatgcaagggggctggggaagaccagcaggt
ccttcagtccagagccaaagttcagggtggaattcagggcctataccccaaatttccaat
ggccctggagagacttcagagcccagcggttgggaggagccttctccacagtccatcagc
aggaaaatggaaattgatgatggaacatctgcttggggtgaccccagcaactacaactac
aaaagtgtcaacttgtgggataaaaacaatgccccatctggccaggcacaatcagtgtcc
cctcagcagggccccccacccctgcaacagccgccaccaggaagaatgccaacaggtctt
gggaatagggacatgaacattgcacattcagcaagcaaggggccaggaatagcttctggg
tggggaggtcgtggctctccttccagtccttgtgtggacaatggtacttcagcctggggt
aaacctactgaagctcccactggttgggatgacagtggcaaggcctcaagttggggggat
ccctcatccaatccagtgaagtctggttcaaagtctatgcaagaaggttgggtagaagga
gagggttcagtcagtgcttcgcgtaaccctagctgggaggaggaggatgagagtggtggt
gtttggaatagtgctggttcccaaggcagcagctcttcatataattctggaggctgggga
gccaaaaagggcaacaagggctccttgaagggtgcaggagattcttggatgaacccaatg
tcaagacagttttcaaatatgggaattttgggagaggacgcaggtggccgttccttggat
ttggcccctggtcctccacaggacaaaaagatggaaggagagaagcgtggcatgggctta
aacgagtacaatggagagatgcgtaaaggaggtcgtggaggtggggcaggagcagtcttc
cgttcacctggttccaaagaggtgggagcttgtgaacctgggccttactatgacaaggca
agtggtcagttgtttagtagcggaggagggatggcacagtcaaggcaccaaccaggggtg
ccacccatcaacccatcagtgcgagcacaagtgcctcatcagttcctgtcacctcaggtg
ccaggctctgtgctgaaacagatgcctcctcccagtggaggtgttgggggaggcatcttt
cctccacagctttcccctcagcacattgccatgctcagcagcatctacccaccacatctt
cagttccagctggcctgtcagctcctactgcaacagcaaccgcagcaacaacagcagcag
cagctgttacagaaccagcgcaagttccccccaaacatacgacaacaagcagacccccaa
cagctggccagaatcatggctgttcttcagcagcaaagacaacagcagcagcatgtggga
ggtacagggggcagctccaaactctctccttctcatcttggaggaagtggcccaaagatg
ccaatgtccgaccccctttcacaccctggcttggcaggatctgttgcggacatacatcag
aaaacacaaggagcttactctgggtttggtcctggaatgagtctctctggtctggaattg
ggtcccatggttggtgggccagctgggctgaaagacagtggggggcagcagtctcgtttc
aaatggatgatggaaggccattctccagcaccttcacctcctgatagcactcttcataaa
aatggtcccattgctgctcctcttaaaatgagaggtggttccccgtattcccagtacgag
atgctaggaggtggtgagggtttaggtgttcctccacaggggccatcagatcactggcac
agaagtcctggaaacaaaatgggcaccaaaactggcacatcaagctggcctccagagttt
caacctggagtgccttggaaaggacgtccgaatgtggacactgactctgatccctacatg
acccctggaagtatgttgggttcatcgatgtcaagcctcaatgacactgagcatcaactg
ctaagagacaacacagaatcaaatccctccctcaacaccttgctgccttcacctggtgcc
tggccctacagtgcctcagagagccccctaaccaatgcacacaatccagctaagtacaca
gactacaagcccagctggccacctgagccaatagggcacaacaagccttggaagaccaat
cgcaacaactctcatctgccacgcccacctcctggactgacccatcagaagcagccttca
gtttctccctggacgagtggaggcccacgagtgggtagaggatggggcggctctggaggc
agccaagaaaacagatttgggcctggttctgcgtggagtgatggaggagcctctaagggg
agctgctggctggttttgagtaatcttacccctcagattgatggctccactttgaggact
atctgtatgcagcatggaccgcttttgacctttcacctcggtttgacccaaggtagtgct
ctaattcgctacagctctcgccaagaagcagccaaagcccagagcgcacttcacatgtgt
gttttaggtaacaccacaatcctggccgagttcgtaagcgaagaggaggtcgctcgctat
tttgcacattcccaggccggagcagctggaagcggcagcggagggagcggggccggcggt
gtggccgtctcagggccggcaggtgtggcgggatcatcaggggctggagccgtgggtaca
atcagtgctgcgagtggtgaccgagaacgtgccgcagtaggaagtctaacagcaggagga
agcagcaacagtggtggaaccggcccctcaggctctacgtggcagagtttggatggtacg
ggcagctcgtctgacccagcctcagcacagggagcaggcctgagcattttcgcccagtgg
agcagcaacggtgctggtggcagcaatgcagcgggcgttgatcccggaagagccgggctg
tggggcggcatgactccaggctacacaggcagcagtctgtgggcttcaccagccatggaa
gatcggcatcagatgaacagtcctgccgcgctgctacccggagacctgctaggaggaggt
gcagactcaatctga

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