Danio rerio (zebrafish): 321695
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Entry
321695 CDS
T01004
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04120
Ubiquitin mediated proteolysis
dre04137
Mitophagy - animal
dre04144
Endocytosis
dre04340
Hedgehog signaling pathway
dre04350
TGF-beta signaling pathway
dre04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
321695 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
321695 (smurf1)
04350 TGF-beta signaling pathway
321695 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
321695 (smurf1)
04137 Mitophagy - animal
321695 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
321695 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
321695 (smurf1)
04121 Ubiquitin system [BR:
dre04121
]
321695 (smurf1)
03029 Mitochondrial biogenesis [BR:
dre03029
]
321695 (smurf1)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
321695 (smurf1)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
321695 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
321695 (smurf1)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
HECT type E3
321695 (smurf1)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
321695 (smurf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
321695
NCBI-ProteinID:
NP_001001943
ZFIN:
ZDB-GENE-040426-2744
Ensembl:
ENSDARG00000016086
UniProt:
Q6PCR3
LinkDB
All DBs
Position
3:complement(39644685..39723007)
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLVENEGPVFEDSGPGRPLSCFMEEPM
PYTDPTGAAGGGNCRALESPNQEQRLQAQRIRNQDSRGHTHTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEELGPLPPGREIRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMSQHSQVKESSQALPVQMEVGMEEGDGELPVRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTLPFYKQLLGKPIQLCDLETVDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGKNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDNK
ELELIIGGLGKIDLNDWKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcgaaggaacgggtcaagcatcaaaatccgactgacagtatta
tgtgccaagaatctagcaaagaaagacttcttccggttgcctgatccttttgccaaagtg
gtggtggacggctcgggtcaatgccactctacagacacggtcaaaagcacactggacccc
aagtggaatcagcattacgacctgtatattgggaagaccgattccatcaccattagcgta
tggaaccataagaagatccataagaagcagggtgcgggattcttaggctgcgtgcggctc
ttgtcaaacgctatcagcagactaaaagacacaggctaccagcgtttagacttatgcaag
ttaaacccatctgacagtgatgctgtccgtggacaaatcgttgtgagtttgcagaccaga
gacagaattggcagtggagggcctgtggtggactgtcgaggactggtagagaatgaaggg
ccagtctttgaagactcgggacccggacggcctctcagctgcttcatggaggagcccatg
ccatacaccgatcccacaggagccgctggagggggcaactgccgtgcacttgagtcaccc
aatcaggaacaacggctccaagcacaacgcatcagaaaccaggattcccgagggcacacg
cacaccccccagaatcgaccgcacggacaccaatcccccgacctccctgagggctatgag
caaaggaccaccgtgcagggccaagtctattttctgcacacacagactggcgtgagcacc
tggcacgatcccagaataccccgggatttgaacagcgtgagttgtgaggagctgggccca
ctgccgcccggctgggagatcaggagcactgtgtcaggacgaatttatttcgtcgaccac
aataatagaaccacgcaattcaccgaccccaggttacaccacatcatgagccaacactct
caggtgaaggagtcgagccaggctctgcccgtgcagatggaggttggcatggaggagggt
gatggagagttgccggtgcgctacgaaagagatcttgtccagaaactcaaagttctccgg
catgagctctcgctgcagcagcctcaggccggccactgccgcatagaagtgtcccgcgag
gagatctttgaggagtcttataggcagatcatgaagatgagacccaaagacctgaagaag
cggctgatggtgaagttcagaggcgaggaggggctggattacggaggagttgctagggag
tggttatatctgctctgccatgagatgctgaatccatactatggcttgtttcagtactcg
accgataacatctacacactacagatcaacccagactcctccattaaccctgatcacttg
tcttacttccactttgttgggcggattatgggtctggctgttttccacgggcactacatt
aacgggggcttcaccttgcccttctacaagcagctcctggggaaacccattcagctttgt
gaccttgagaccgtggacccagagctgcacaagagtctcgtctggatcctagaaaatgac
atcacatctgttttggaccacaccttctgcgtagaacataatgctttcggcaagttcctc
caacatgagctcaaaccaaatggcaagaacatcccagtcacagaggagaacaagaaagaa
tacgtgaggctgtacgtcaactggaggttcatgcgaggcatcgaggcacagtttcttgcc
ctgcaaaagggcttcaacgaactcataccgcagcatctgctcaagcctttcgacaacaag
gaacttgagctgatcatcggtggtttggggaagatcgatctgaacgactggaaggccaac
acgcggctgaagcactgtgtggctgacagcaacatcgtgaagtggttttggcaggcggtg
gagtcgtttgacgaggagaggagaggcagactcttacagttcgtgacaggctccacacgc
gtccctctacaaggctttaaagcactgcaaggttctacaggttctgcaggaccaagactc
ttcactattcatttaattgatgccaacacagacaacctgcccaaagcccacacatgtttc
aaccgtatcgacatcccgccttacgagtcgtacgagaagctgtatgaaaagctcctgaca
gcagtggaggagacatgtggtttcgcagtggagtga
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integrated database retrieval system
