KEGG   Danio rerio (zebrafish): 321726
Entry
321726            CDS       T01004                                 
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03082  ATP-dependent chromatin remodeling
dre03083  Polycomb repressive complex
dre04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    321726 (rbbp4)
   03083 Polycomb repressive complex
    321726 (rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    321726 (rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    321726 (rbbp4)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     321726 (rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     321726 (rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     321726 (rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     321726 (rbbp4)
    PRC2.2
     321726 (rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     321726 (rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    321726 (rbbp4)
  Chromatin remodeling factors
   NuRD complex
    321726 (rbbp4)
   NuRF complex
    321726 (rbbp4)
   NuRF complex (fruit fly)
    321726 (rbbp4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A Beta-prop_IFT140_1st Beta-prop_SPT8 MIOS_WD40 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 321726
NCBI-ProteinID: NP_997760
ZFIN: ZDB-GENE-030131-445
Ensembl: ENSDARG00000029058
UniProt: Q6P3H7
LinkDB
Position
19:complement(30999839..31007318)
AA seq 424 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLRGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADT
EVQG
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggctgataaagaagctgcatttgatgacgcggtggaggagagggtgataaatgaagaa
tataaaatatggaagaaaaacactccgtttctttacgatctggtgatgacccacgcgctt
gagtggcccagtctgactgctcagtggttgccagatgtcaccaggcctgaagggaaggat
tttagtgtgcatcgtctggttcttggcacacacacctctgatgagcagaatcacctggtt
attgccagtgttcagctgcccaatgatgatgcccagtttgatgcttcacattatgatagt
gaaaaaggagaatttggtggttttggctcagtaagtggcaagatagagattgagatcaag
attaatcatgaaggagaggttaacagggctcgctacatgccacagaacccctgcatcatt
gccacaaagacgcctactagtgacgtgctggtctttgactacaccaaacacccctccaaa
ccagacccctctggagagtgcactcctgatctgcgtcttagggggcatcagaaagaaggt
tatggtctgtcctggaaccccaatcttagaggctgcctgctgagtgcatcagatgatcat
accatctgtctgtgggacatcagcacagtgcccaaggagggaaaaatagtggatgcaaaa
actattttcactggtcacactgctgtagtggaggatgtgtcctggcacctgctgcatgag
tctctcttcgggtctgttgcagatgaccaaaagcttatgatctgggacactcgttccaat
aacacatccaaacctagtcatgcagtggatgcccacactgcagaggtcaactgtttgtcc
ttcaacccttacagcgagttcattctggccacaggttctgctgacaaaactgttgcattg
tgggatttgcgaaacctcaagctgaaacttcactcatttgagtcgcacaaagatgaaatc
ttccaggttcagtggtcaccccataatgagaccattctggcctccagtggaacagacagg
agacttaatgtttgggatctcagtaaaattggtgaggaacagtcaccagaagatgcagaa
gatgggcctccagagctgctgtttatccatggaggccatacagccaagatttctgacttt
tcttggaatccaaatgaaccatgggtgatttgctctgtgtctgaggacaacatcatgcaa
gtctggcagatggcggagaacatctataatgatgaggacccagagggggcagcagacact
gaggttcagggataa

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