KEGG   Danio rerio (zebrafish): 321855
Entry
321855            CDS       T01004                                 
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog
  KO
K16474  intraflagellar transport protein 88
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:dre03037]
    321855 (ift88)
Cilium and associated proteins [BR:dre03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   321855 (ift88)
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_12 TPR_8 TPR_19 TPR_6 TPR_14 TPR_16 TPR_7 TPR_11 ANAPC3 TPR_17 TPR_9 SNAP ARM_TT21_5th TPR_10 TPR-S TPR_CcmH_CycH ARM_TT21_4th TPR_MalT ARM_TT21_2nd HAT_PRP39_C RPN7 TPR_15 ARM_TT21_C DUF6584 HEAT_Nup120 SHPRH_helical-1st Consortin_N DUF2989 TPR_4 Evf Secretin_N_2 RNPP_C
Other DBs
NCBI-GeneID: 321855
NCBI-ProteinID: NP_001001725
ZFIN: ZDB-GENE-030131-574
Ensembl: ENSDARG00000027234
UniProt: Q6RUQ9
LinkDB
Position
9:complement(21365630..21383612)
AA seq 824 aa
MENVHLVPEEEEDDLYTGYNDYNPTFDSEDLHNDVAFQQAVRTSHGRRPPMTAKYPGTAI
GGRPIGTAYGSRVPIGTAMGRPMTGAVQDGAARPMTAVRAAGYSSSIARGSAFDPLGQAK
GPAPPLETKNEDTPEEKIKILEKKVNDLIEDSCLAHARGDLQVSLEKAKEAGRKERALVR
QREQTGTADHINLDLTYSVLFNLANQYANNDMYTEALNTCQVIVKNKMFNNAGRLKVNMA
NIYFKQKNYTKAIKFYRMALDQISNAHNAMRIKIMQNIGVVFIHMGQYSDAITSFEYIMT
ESPNIKTGFNLILCYYAIGDRERMKKAFQKLICVPLGVDDDDKYIPPNDDPHANMVIEAI
KNDKLHQMERERKALAEKYIMTSAKLIAPAIEMSFAAGFDWCVDMVKGSQYVELANDLEI
NKAITYLRQRDFKQAVETLKMFEKKDSRVKSAAATNLSFLYFLEKDFDQADRYAELAMSA
DRYNPAALINKGNTLFVKEDYEKAAEFYKESLRNDSSCTEALYNLGLTYKRLGRLEEALD
CFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSVTPTDAQVLAKLGDLYDNE
GDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQLM
VASCYRRSGNYQKALETYKEIHRKFPENVECLRFLVRLCTDMGLKEVQDYATKLKKVEKM
KEIREQRVRSGRDSSARSRREGSAGSDSGQSNHGTSAKGERLSVKLKTLPGSNEPYEAST
QQEIDASYVDPLGPQTQRPKTAARKRNEEDEFADEELGDDLLPE
NT seq 2475 nt   +upstreamnt  +downstreamnt
atggagaatgtgcatcttgtcccagaggaagaggaggatgatttgtatacaggctacaat
gattacaatcccacttttgactcagaggaccttcacaatgatgtggccttccagcaggct
gtcaggacaagtcatggcaggagacccccaatgacagcaaaatatcctggcactgctatt
ggagggcgaccgattggtacagcttatgggtctcgagtgcctattggcactgcaatgggg
cggccaatgactggagctgttcaggatggtgcagctcgtcccatgactgccgttcgggcc
gcaggatattcttcatcaatagctagaggctctgcgtttgatccactgggacaggcaaaa
ggaccggctcctccattagagacaaagaatgaagacactccagaggaaaagataaagatc
ctggaaaagaaggtgaatgatttgatagaggatagctgtcttgctcatgcacgtggagat
cttcaggtgtctctagagaaagccaaagaagcaggcaggaaggaaagagctttggtgaga
cagagagaacaaacaggcactgcagaccacatcaatctggatctgacatactctgtgctg
tttaatttagcaaatcagtatgccaacaatgacatgtacaccgaggccttgaacacttgc
caagtcattgtgaagaacaaaatgttcaataatgcagggcgattaaaagtgaacatggca
aatatatatttcaagcaaaagaactatacaaaggctattaaattttatcgcatggctttg
gatcagatttcaaatgcccacaatgcaatgaggataaagatcatgcagaacattggagtt
gtgttcatacacatgggccagtactcagacgccatcacatcctttgagtacatcatgact
gagagccctaacataaagacaggtttcaacctcatcctgtgctactatgccattggagac
cgtgagaggatgaagaaagcttttcaaaaactcatttgtgtgccccttggagttgatgat
gatgacaaatatatccctcctaatgacgaccctcatgcaaacatggtgattgaagctata
aagaatgataagcttcaccaaatggaaagagagaggaaagcacttgctgaaaaatatatt
atgacctcagccaaactcattgctccagcaatcgagatgtcatttgcagctgggtttgac
tggtgtgtggacatggtgaagggttcccaatacgtggagcttgcaaatgacttggagatc
aataaagccattacctacctaagacagagagacttcaaacaggcagttgagacgctaaag
atgtttgagaagaaggacagtcgagtaaaaagtgcagctgccactaatctttcttttctt
tactttttggaaaaagattttgaccaggctgaccgctatgcagagctggccatgagcgct
gaccgctacaaccccgcagccctcattaacaaaggcaacacgttgtttgtgaaggaggac
tatgagaaagcagcagagttttacaaggagtctcttcgtaatgactcatcctgcactgaa
gcactctacaacttaggtttgacgtataagaggctgggtagactggaggaagctctggat
tgttttctcaaactgcatgccatcctcagaaacagtgctcaggtcatgtaccagctggct
aatctatatgagatgttggaggaccctcatcaggccattgagtggctaatgcagcttacc
agtgtgacccctacagatgcacaggtgctggccaaactcggagacctctatgacaatgaa
ggagacaaatctcaggcctttcagtattattatgagtcgtacaggtattttccctcaaac
attagtgtcattgagtggttgggtgcatattacatcgacacccagttctgtgagaaagca
attcagtactttgagagagctaccctaattcagccaacacaggtgaagtggcagcttatg
gtggccagctgttacaggagaagtgggaattatcagaaggcacttgagacctacaaggag
atccatcgcaagtttcctgaaaatgttgaatgtttgcgattcctggtccggctttgcaca
gatatgggactaaaagaggtgcaggattacgccaccaaactcaagaaagttgaaaaaatg
aaggagatcagagagcagagggtgaggtctggaagggatagcagtgctcgaagccgcagg
gaaggtagcgctggcagtgacagtggacagagcaaccacggcaccagcgccaagggtgag
aggcttagcgttaaactgaaaactcttccaggatccaatgagccgtatgaagccagtact
caacaggaaatagatgcttcttatgtcgatccattggggcctcaaacacagaggccaaaa
actgcagcaaggaaacgcaatgaggaggatgagtttgctgatgaagagctgggagatgat
ttactgcctgagtga

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