Danio rerio (zebrafish): 321931
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Entry
321931 CDS
T01004
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
321931 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
321931 (dhx15)
03009 Ribosome biogenesis [BR:
dre03009
]
321931 (dhx15)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
321931 (dhx15)
Spliceosome [BR:
dre03041
]
Complex A
U2 snRNP components
U2 related factors
321931 (dhx15)
Complex B
321931 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
321931 (dhx15)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
90S particles
Helicases
321931 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Atrophin-1
nSTAND3
AAA_25
SRP54
Flavi_DEAD
AAA_29
Motif
Other DBs
NCBI-GeneID:
321931
NCBI-ProteinID:
NP_001108613
ZFIN:
ZDB-GENE-030131-650
Ensembl:
ENSDARG00000015392
UniProt:
E7F3I8
LinkDB
All DBs
Position
7:complement(71278614..71331508)
Genome browser
AA seq
769 aa
AA seq
DB search
MSKRHRLDLGDEYSSSKKRSSDGKDRDRDRDERSKDRDRDRDRERDRDRDRDRDRDRERD
SKSSSAALSSSVSGSGILPLKQASMHQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERF
NDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVACTQPRRVAAMSVAQRVA
DEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERT
LATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPE
PERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKII
PLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV
YNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSN
LGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFP
LDPQLAKMVIASCDFNCSNEVLSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLT
LLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYY
INIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNY
IRTCTDIKPEWLVKIAPQYYEMSNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgacatcggttggatttaggtgatgaatattcgtcgagcaagaagaggtcg
tctgacgggaaggaccgtgacagagatcgggatgagcgatcaaaggatcgagatcgtgac
cgggaccgtgagcgcgatcgtgacagagaccgagaccgcgatcgcgaccgagagagagac
agcaagtcgtcgagtgcggcgctcagctccagcgtgtctggaagcggaatccttcctctg
aagcaggccagcatgcatcagcagatcaaccccttcaccaacctgcctcacacgccacgc
tactacgagatcctcaagaagaggctgcagttgcccgtctgggagtataaagagcgcttt
aatgacatcctgaaccgccatcagagctttgtgctcgtaggagagaccggctctggaaag
accacacagatccctcagtggtgtgttgacatggtcaggtctctgcctggcccgaagcgc
ggcgtggcctgtactcagcccagaagggtggcagccatgagtgtggctcagagagtggca
gatgagatggatgtcatgctgggtcaggaggtcggatactccatcagattcgaggactgt
agctctgcaaagaccatactaaaatatatgacagacggtatgttactccgtgaggctatg
aacgaccccttactggagcgatacggtgtcattattcttgacgaggcccacgagcgcacg
ttagccacagatattctgatgggcgtcctcaaggaagtggtccgacagagatctgacctt
aaggtcattgtaatgagcgccactctggatgccggaaagttccaggtttattttgataac
tgccccttgctgaccattcccggccggacacatccagtggagatcttctacacacctgag
cctgagcgggactacctggaggcggccattcgcacggtcatccagatccacatgtgtgag
gaggacgagggagatgtgctgctcttcctcactggacaggaggaaatcgacgaagcctgc
aaaaggatcaaacgtgagattgacgatctcggccctgatgttggagacattaaaatcatc
ccgctctactccacactgccaccacagcagcagcagaggatctttgagcctccaccgcct
cgcaaacccaacggagccatcggcaggaaggttgtggtttctacaaacatcgctgaaacg
tccctgaccatcgatggcgtggtgtttgtaattgatcctggctttgccaagcaaaaggtg
tataaccctcgcattcgagtcgaatcgctgcttgtgactgctattagcaaggcttcggcc
cagcagagggcaggtcgtgccggacgtacacgcccgggaaagtgcttccggctctacact
gagaaggcctacaagacagagatgcaggataacacctaccctgagattctcaggtcgaat
ctgggctctgtggtgctacagctcaagaagctcggtatcgatgaccttgtgcactttgac
ttcatggatccaccagctcccgagaccctaatgcgagccctggagctgttgaattatctt
gcggcgctgaatgacgacggtgacctgacagagctgggctccatgatggccgaattccct
ctcgacccccaactggccaagatggtcatcgccagctgcgatttcaactgctccaatgaa
gtcctctccatcaccgctatgctatcagtcccacagtgctttgtgcgtcccaccgaagct
aagaaggctgctgatgagtccaaaatgaggttcgcccacatcgacggggaccacctgacc
ttgctcaacgtctaccacgccttcaaacagaaccacgagtcggtgcaatggtgctacgat
aacttcatcaactaccgctcgctgatgtcggctgataatgtgcggcagcagctttctcgg
atcatggaccggttcaacttaccccgacgcagcacagagttcaccagccgagactattac
atcaacatccgccgcgctctggtcaccggcttcttcatgcaggttgctcacctggagcgc
accggccactatctcacagtgaaggacaaccaggtggtccagttgcacccgtccaccgtt
ctggaccacaagcccgagtgggtgctttacaacgagtttgtgctgaccaccaagaactac
atccgcacctgcactgatataaagcccgaatggctggtgaaaatcgctccacaatactac
gagatgagcaacttccctcagtgcgaggctaagaggcaactggaacgtatcgtggctaaa
cttcaaaccaaggagtactctcaatactga
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integrated database retrieval system