KEGG   Danio rerio (zebrafish): 322055
Entry
322055            CDS       T01004                                 
Symbol
cth
Name
(RefSeq) cystathionine gamma-lyase
  KO
K01758  cystathionine gamma-lyase [EC:4.4.1.1]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre00260  Glycine, serine and threonine metabolism
dre00270  Cysteine and methionine metabolism
dre00450  Selenocompound metabolism
dre00670  One carbon pool by folate
dre01100  Metabolic pathways
dre01230  Biosynthesis of amino acids
Module
dre_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:dre00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    322055 (cth)
   00270 Cysteine and methionine metabolism
    322055 (cth)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    322055 (cth)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    322055 (cth)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    322055 (cth)
Enzymes [BR:dre01000]
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.1  cystathionine gamma-lyase
     322055 (cth)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   322055 (cth)
SSDB
Motif
Pfam: Cys_Met_Meta_PP Aminotran_1_2 Met_gamma_lyase Aminotran_5 Beta_elim_lyase DegT_DnrJ_EryC1
Other DBs
NCBI-GeneID: 322055
NCBI-ProteinID: NP_997769
ZFIN: ZDB-GENE-030131-774
Ensembl: ENSDARG00000074301
UniProt: F1QPF7
LinkDB
Position
6:complement(37409558..37422947)
AA seq 404 aa
MSSEMQNDSSAGFLPIYKSFATDAIHVGSEPEQWSSMAVVPPISLSTTFKQHGPGKHAGF
EYSRSGNPTRNCLEKAVAALDGAKYCLAVASGLAATLTITHLFKSGDGILCMNDVYGGTN
RYFRKVASEVGLDISFADLTKLEELKAGLKPNTKMVWIETPTNPTMKVVDIQACADIVHK
HNKDTIVVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLISLSRDDLYERLK
FLQNSLGAVPSPFDCYMCNRGLKTLHLRMKQHFKNALAAAQFLEADPRVDRVIFPGLPSH
PQHELTKRQCTGCPGMITFYIKGKLEHASTFLSNLKLFALAESLGGYESLAEHPAIMTHA
SVCEEERKKLGISDTLIRLSVGLEDEEDIIADLDQALGAAHPKK
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgtcttcagagatgcagaacgacagctcagccggcttcctgccgatctacaagtcattc
gctacagatgcgatccacgttggttcagagcccgagcagtggagctctatggccgtagtg
cctcctatttcactgtccaccacctttaaacagcacggccccggaaaacatgcggggttc
gagtacagcaggagtggaaatccgacaagaaactgtcttgaaaaagcagtcgctgctttg
gatggtgcaaaatactgtctggctgttgcctctggattggcggcaactttgaccatcaca
catctttttaaaagtggagatggaattttgtgcatgaatgatgtatatggaggaaccaac
cgatatttcagaaaagtagcttcagaagttgggcttgatatatcttttgcagacctcaca
aagcttgaggagttaaaagcagggctaaaaccaaatacaaagatggtttggattgaaaca
cccacaaaccctacaatgaaggttgtggacatccaggcctgtgcagatattgtccataag
cacaacaaggacacaatcgttgttgtggacaacactttcatgtcagcctacttccagcgc
ccccttgcacttggagcagacatctgcatgtactctgcaacaaaatacatgaatggtcac
agcgatgtcgtcatgggcctgatttctctcagccgtgacgacctctatgagcgactgaaa
tttttgcagaattctcttggtgctgtgccgtctccatttgactgttacatgtgcaatcgg
ggtctgaagacgctgcacctgaggatgaagcagcactttaagaacgcactggctgcagca
cagtttctagaggccgacccgagggtggacagagtcatcttcccaggtcttccgtctcat
cctcaacatgagctaacaaagagacagtgcacgggctgtcctgggatgatcacattttac
atcaaagggaaactggagcatgcttcaaccttcctcagcaatctaaagttgtttgcactt
gctgaaagtcttgggggttatgagagtctagcagaacacccagcgattatgactcatgct
tcggtgtgcgaggaagagaggaagaagctgggcatcagtgatacactcattcgtctttca
gtgggtctggaggacgaggaagatattattgcagatctggaccaagctctcggtgctgca
catccaaagaagtga

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