Danio rerio (zebrafish): 322055
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Entry
322055 CDS
T01004
Symbol
cth
Name
(RefSeq) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00260
Glycine, serine and threonine metabolism
dre00270
Cysteine and methionine metabolism
dre00450
Selenocompound metabolism
dre00670
One carbon pool by folate
dre01100
Metabolic pathways
dre01230
Biosynthesis of amino acids
Module
dre_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
322055 (cth)
00270 Cysteine and methionine metabolism
322055 (cth)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
322055 (cth)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
322055 (cth)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
322055 (cth)
Enzymes [BR:
dre01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
322055 (cth)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
322055 (cth)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
322055
NCBI-ProteinID:
NP_997769
ZFIN:
ZDB-GENE-030131-774
Ensembl:
ENSDARG00000074301
UniProt:
F1QPF7
LinkDB
All DBs
Position
6:complement(37409558..37422947)
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AA seq
404 aa
AA seq
DB search
MSSEMQNDSSAGFLPIYKSFATDAIHVGSEPEQWSSMAVVPPISLSTTFKQHGPGKHAGF
EYSRSGNPTRNCLEKAVAALDGAKYCLAVASGLAATLTITHLFKSGDGILCMNDVYGGTN
RYFRKVASEVGLDISFADLTKLEELKAGLKPNTKMVWIETPTNPTMKVVDIQACADIVHK
HNKDTIVVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLISLSRDDLYERLK
FLQNSLGAVPSPFDCYMCNRGLKTLHLRMKQHFKNALAAAQFLEADPRVDRVIFPGLPSH
PQHELTKRQCTGCPGMITFYIKGKLEHASTFLSNLKLFALAESLGGYESLAEHPAIMTHA
SVCEEERKKLGISDTLIRLSVGLEDEEDIIADLDQALGAAHPKK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagagatgcagaacgacagctcagccggcttcctgccgatctacaagtcattc
gctacagatgcgatccacgttggttcagagcccgagcagtggagctctatggccgtagtg
cctcctatttcactgtccaccacctttaaacagcacggccccggaaaacatgcggggttc
gagtacagcaggagtggaaatccgacaagaaactgtcttgaaaaagcagtcgctgctttg
gatggtgcaaaatactgtctggctgttgcctctggattggcggcaactttgaccatcaca
catctttttaaaagtggagatggaattttgtgcatgaatgatgtatatggaggaaccaac
cgatatttcagaaaagtagcttcagaagttgggcttgatatatcttttgcagacctcaca
aagcttgaggagttaaaagcagggctaaaaccaaatacaaagatggtttggattgaaaca
cccacaaaccctacaatgaaggttgtggacatccaggcctgtgcagatattgtccataag
cacaacaaggacacaatcgttgttgtggacaacactttcatgtcagcctacttccagcgc
ccccttgcacttggagcagacatctgcatgtactctgcaacaaaatacatgaatggtcac
agcgatgtcgtcatgggcctgatttctctcagccgtgacgacctctatgagcgactgaaa
tttttgcagaattctcttggtgctgtgccgtctccatttgactgttacatgtgcaatcgg
ggtctgaagacgctgcacctgaggatgaagcagcactttaagaacgcactggctgcagca
cagtttctagaggccgacccgagggtggacagagtcatcttcccaggtcttccgtctcat
cctcaacatgagctaacaaagagacagtgcacgggctgtcctgggatgatcacattttac
atcaaagggaaactggagcatgcttcaaccttcctcagcaatctaaagttgtttgcactt
gctgaaagtcttgggggttatgagagtctagcagaacacccagcgattatgactcatgct
tcggtgtgcgaggaagagaggaagaagctgggcatcagtgatacactcattcgtctttca
gtgggtctggaggacgaggaagatattattgcagatctggaccaagctctcggtgctgca
catccaaagaagtga
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