Danio rerio (zebrafish): 322909
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Entry
322909 CDS
T01004
Symbol
cald1a
Name
(RefSeq) caldesmon 1a
KO
K12327
caldesmon
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
322909 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
322909 (cald1a)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
322909 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
322909
NCBI-ProteinID:
NP_001108355
ZFIN:
ZDB-GENE-030131-1629
Ensembl:
ENSDARG00000070314
UniProt:
B0BLV5
LinkDB
All DBs
Position
4:7415337..7505952
Genome browser
AA seq
518 aa
AA seq
DB search
MDDDFERRRELRRQKREEMRLEAERMAYRRSEEDEEEAARERRRRARQERMRSKDSEDVA
FQPETPELNNSHSVTVSESISTSVLSSSGTGEGDEEEQALLERLAKREERRMRRMKEALE
RQKEDEEESSSSSLRRGRSYEPEEHHNNNNNQEEKEEEKQEEEEEEEDVRCREEEEEEEQ
RVEEKQQRSYLRERMEDEDVMRKNKQPNGGVCEDSPPKHKKAERTFSRGSLRSPEAPDAD
DEDARLEAERKLEELKRRRDEMESEEFEKMRQKQQEAEVELEELKRKREERRKVLEEEER
RRKQDEADRKTREEEEKRRMKEEIEKRRAEAAEKRQKVEDSVDGEARKPFKCVSPRGSSL
KIGERAEFLNRSAQKSSVKASHTPVVSKIDNRLEQYTIAVQGNKEVRSPRSGAIDLPMVT
DGIRNIKSMFEKGNVFSSGGSPASTNKDAAGIKVGVAGRINDWLNKTPETGKMSGGRPAD
LKPGDVTSKRSLWENKGSSATKVTSRGETKSVTNGMGH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatttcgagcgccgcagggagctcaggagacagaagcgcgaggagatgcgt
ctggaggctgagaggatggcatatcggcgcagtgaggaggatgaggaggaggctgctcga
gagcgcagaagaagagcgagacaggagagaatgcgcagtaaagacagtgaagacgtggcc
ttccaacctgagaccccagaactcaacaacagccacagtgtgactgtgtctgagagcatc
tccacctcagtgctgagctccagcgggacaggcgagggggacgaggaggagcaggccctg
ctggagcgccttgccaagagagaggagcgcaggatgaggaggatgaaggaggcgctggag
agacagaaggaggatgaagaggaaagcagcagcagcagcctgagacgaggcaggagctac
gagcctgaagagcatcacaacaacaacaacaaccaagaggagaaggaggaggagaaacaa
gaagaggaagaggaggaggaggacgtcagatgtagagaagaagaagaggaggaggagcag
cgagtggaggagaagcaacaaaggtcttatttaagagaacggatggaagacgaagatgtg
atgaggaagaataaacagcccaacggaggagtgtgcgaggacagtcctcccaaacacaag
aaagccgagaggactttcagccgaggcagtttgcgttctcccgaggcgccggacgcagac
gatgaagatgcgcgtctggaggcggagaggaagctggaggagctgaagaggaggagggat
gagatggagagcgaggagtttgagaagatgcggcagaagcagcaggaggccgaggtggag
ctggaggagctgaagaggaagagggaggagaggaggaaggtgctggaggaggaggagcgg
cggaggaagcaggacgaggctgacaggaaaaccagagaggaggaggaaaagaggaggatg
aaggaggagatagagaagagaagagcagaggcggccgaaaagcgtcagaaagtggaggat
tcagtggacggagaggccagaaagccttttaagtgtgtcagtcccagaggatcctcactg
aagatcggtgaaagggcagaatttctcaacagatcagcacagaaaagttctgtgaaggcg
tctcacactcctgtggtgtctaagattgataaccgattagagcagtacaccatcgcggtg
cagggcaacaaggaggtcagatctcccagatcaggcgccatagatcttccaatggtgacg
gacggcattcgcaacatcaagagcatgtttgagaagggaaacgtcttcagctctggcggg
agcccagcttccaccaataaggatgcagctgggataaaggtgggcgtggccggtcgcatc
aatgattggttgaataaaactccagagacaggcaaaatgtcaggaggaagacctgctgac
ctgaaaccgggcgacgtgaccagcaaacgcagtctatgggaaaacaaaggctcctctgct
accaaggtcacaagcaggggagagaccaaatctgtcaccaatggaatgggccattaa
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integrated database retrieval system