KEGG   Danio rerio (zebrafish): 323016
Entry
323016            CDS       T01004                                 
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    323016 (exosc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    323016 (exosc8)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     323016 (exosc8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 323016
NCBI-ProteinID: NP_001002865
ZFIN: ZDB-GENE-030131-1736
Ensembl: ENSDARG00000068755
UniProt: Q6DRN4 A0A8M1N197
LinkDB
Position
10:40018547..40027261
AA seq 277 aa
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNINSISTADGSALVKIGNTTVIC
GIKAELAVPPSEAQNKGYLVPNVDLPPLCSSRFRAGPPGEQAQAASQFIADVIESSDLIN
LEELCIEKAKLCWVLYCDIMCLDYDGNLLDACITVLLAALKTAQLPEVTINKETDLAEVD
IEKKRRLKINRHPVGSSFAVFDDSIIIVDPTAEEESLSTALMTVVTDEEDRLCAVHKPGG
TSLSGEKLQHCINRALTRNKEIRKLLDKVHESTKTMK
NT seq 834 nt   +upstreamnt  +downstreamnt
atggcggctggttttaaaaccgcagagcctcttgaatatcaccggagctttctgaaagaa
aactgtcgtccagatggaagggagttgggagagtttagacccacgacgttaaatattaac
tccatatctacagccgatggatcagcactggtgaaaattggaaacactaccgtgatctgt
gggataaaagctgaattggctgtgccgccatctgaggctcagaataaaggatatttagtc
ccaaatgtagatctgcccccgctgtgctcgtccagattcagagctggtccaccaggagaa
caggcacaggctgccagccagttcatcgcagatgtcatcgaaagttccgatttaataaat
ttggaggaactgtgcattgaaaaagctaagctttgttgggtgctgtactgtgatattatg
tgtttggattacgatgggaacttacttgacgcctgcatcacagttctgctggcagcttta
aaaaccgcacaactccctgaagtcaccataaacaaagagacagatctagcagaagttgac
attgagaagaagaggcgcttgaagatcaaccggcacccagtcggctcatcgtttgcagta
tttgatgactccatcattatagttgaccccacggcggaagaggaaagcttgtctacagca
ttaatgactgtggtgacggatgaggaggatagactctgtgcagttcacaaaccaggtggg
acatcgttatccggcgagaagctacaacactgcataaacagagccatcacaagaaacaaa
gagatcagaaaactgctggacaaagtccacgagagcacgaagaccatgaaataa

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