KEGG   Danio rerio (zebrafish): 323203
Entry
323203            CDS       T01004                                 
Symbol
snx4
Name
(RefSeq) sorting nexin-4
  KO
K17919  sorting nexin-4
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    323203 (snx4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    323203 (snx4)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:dre04990]
    323203 (snx4)
Membrane trafficking [BR:dre04131]
 SNARE
  SNARE associated proteins
   Others
    323203 (snx4)
 Protein recycling
  Rab GTPases and associated proteins
   Rab4 associated proteins
    323203 (snx4)
 Autophagy
  Cytoplasm to vacuolar targeting (CVT) pathway
   Other Cvt associated proteins
    323203 (snx4)
Domain-containing proteins not elsewhere classified [BR:dre04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   323203 (snx4)
SSDB
Motif
Pfam: PX Vps5 V-SNARE
Other DBs
NCBI-GeneID: 323203
NCBI-ProteinID: NP_001014368
ZFIN: ZDB-GENE-030131-1923
Ensembl: ENSDARG00000022659
UniProt: Q58EC1
LinkDB
Position
9:38588091..38621202
AA seq 434 aa
MADSGSEDIAVIGNTDLTPSESQNNLKNTMVEKGTSLLKKMEISVAEAEKRTGKNAVNMQ
ETYTVYLIETRPVDAASEGTSPVPDSLWRRYSEFELLRNYLLVTYPFVVVPPLPEKRAEF
VWHKLSADNMDPDFVERRRVGLENFLLRVASHPVLARDNIFYLFLTEEKAWKETVFETGF
QAKADSRLKALNATFRVKNPDKRFAEMKHYGDELQAVVSQLLRVRARAADRLYGVYKVHG
NYGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASIDDILEEEEHYADQLKEYLFYADALRA
VCRKHELTQYELETAVQDLSSKKQQREELATGTVRTFSLKGMTSKLFGQETPEQREAKLK
MLETQIEEGEEMVKDRNVECEEFVKGAWTDIERFKEQKDHDLREALISYAIMQISMCKKG
IQVWNNAKECFSKM
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggcggattcaggaagcgaggatatagcggtgattggaaacacagacctgactccgtcg
gagtcacagaacaacttaaagaacacgatggttgaaaaagggacaagtcttctgaagaag
atggagatcagtgtggctgaagcagagaagaggaccgggaagaatgcagtcaacatgcag
gagacttatacagtgtatcttatagagacgagaccggtggatgctgcatcagaagggacc
agtcctgtcccagattctctctggaggcgttacagcgagtttgagctccttagaaactat
ttgttagtcacttatccatttgtggtggttccacctttgcctgaaaaacgggcggaattt
gtttggcacaagctttcggcagacaacatggaccctgactttgtggagaggcgtcgagtt
ggactagagaacttcctgctgcgagtggcttcacatccagtcctggccagggacaatatc
ttctatttgtttctcactgaggaaaaagcttggaaggaaaccgtattcgagacaggattt
caggcgaaggccgactccagattaaaggcgttaaatgccacgttcagagtaaagaatcct
gacaagaggtttgcagaaatgaaacactatggagatgagctgcaggctgttgtttcacag
ctgctgagagttcgggcgagagcagctgatcgcctttatggtgtctacaaagtccatgga
aactatggaagagttttcagcgagtggagcgccattgagaaagagatgggagatgggctg
cagagcgccggacaccacatggatgcgtatgctgcctctatagatgatattctagaagaa
gaggagcattatgcagaccagctgaaggagtatcttttctacgcagatgcattgcgggca
gtgtgtaggaagcatgaactgactcagtatgaactggagacagccgtccaggatctgagc
tctaagaaacagcagcgggaggaactcgccaccgggacggtccggaccttctctctgaag
ggaatgaccagtaaactgtttggacaagagaccccagagcagagagaggccaagctgaaa
atgctggagacacagattgaagaaggagaggaaatggtcaaagacagaaatgtagaatgc
gaagagtttgtgaaaggtgcatggacggacattgagaggttcaaagagcagaaagaccat
gatctccgagaagctctcatcagctacgccatcatgcagatcagcatgtgtaaaaaggga
attcaagtgtggaacaacgctaaagagtgcttcagtaagatgtaa

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