Danio rerio (zebrafish): 323239
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Entry
323239 CDS
T01004
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03022
Basal transcription factors
dre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
323239 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
323239 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
323239 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
dre03400
]
323239 (gtf2h2)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
323239 (gtf2h2)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
323239 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
323239
NCBI-ProteinID:
NP_963875
ZFIN:
ZDB-GENE-030131-1959
Ensembl:
ENSDARG00000016514
UniProt:
Q7ZVV4
LinkDB
All DBs
Position
5:26221011..26233068
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEVLKEDESGSLKATVEDILFQAKRKRVFESHGQVRLGMMRH
LFVIIDSSRSMEDQDLKPNRLTSTLKLMEHFVEEYFDQNPISQIGIITTKNKRAEKLTDL
AGNPKKHITALRKAVDSTCVGEPSLYNSLNMALQTLKHMPAHTSREVLVIFSSLTTCDPG
NIYELIKTLNGLKIRVSVIGLSAEVRVCTILTRETGGSYNVILDESHFKELLLLHVKPPP
ASSSSECSLIRMGFPQHVIASLSDQDAKPSFSMAHLDSSSEPELSLGGYYCPQCRAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLEAFQETPLEEYEGERFCEACQGELKDKSVFTC
LACKKVFCVECDIFIHDTLHCCPGCMQIDGTS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaccagaaagaacaaaacgctgggaaggaggatatgaacgaacatgggaa
gtgctgaaggaggatgagtctgggtctctcaaagctactgtggaggacattcttttccag
gcaaagaggaaaagagtgtttgagagtcatggacaagttcggcttgggatgatgcggcac
ctctttgtaatcattgactcttctagatcaatggaagaccaagacctgaagccaaacaga
ctgacctccaccctgaagctgatggagcattttgtggaggaatactttgaccagaatcca
atcagtcagattgggatcattaccaccaaaaacaagagggcggagaagctcactgatctt
gcagggaaccctaagaagcatataacagctctgaggaaagctgtagactccacatgtgtc
ggggaaccgtccctctacaactctctcaacatggctctgcagactctgaaacacatgcct
gctcacacaagcagagaagtgctggttattttcagcagtcttactacctgtgacccaggc
aacatctatgagctcatcaaaactctcaatggtttgaagatccgagtgtcagtgattggc
ctgtcggcagaggttcgggtgtgcaccattctcacaagagaaaccggaggatcctataat
gtgatactggatgagagtcattttaaagagctgctgcttctccatgtgaagcctcctcct
gccagctcctcctcagagtgctccctcatccgcatgggttttccccagcatgtcattgcg
tctctgtctgatcaggatgccaagccctcattcagcatggcacaccttgacagcagtagt
gagccagaactcagtctgggtggatactactgtcctcagtgcagagccaagtacacagag
ctgccggtggagtgtaaagtgtgtggtctgactttagtctctgctcctcatttggcccgt
tccttccaccacctcttccctctggaggccttccaggagaccccgctggaggagtatgag
ggagagaggttctgcgaagcttgccaaggagagttgaaggacaaaagtgtgtttacttgt
ctagcatgtaaaaaggtgttctgtgtggaatgtgacatcttcatacacgacacactgcac
tgctgtcctggctgcatgcagattgacgggacgtcctga
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integrated database retrieval system
