Danio rerio (zebrafish): 323246
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Entry
323246 CDS
T01004
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X2
KO
K20225
capicua transcriptional repressor
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
323246 (cicb)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
323246 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Tudor_5
Motif
Other DBs
NCBI-GeneID:
323246
NCBI-ProteinID:
XP_002664857
ZFIN:
ZDB-GENE-030131-1966
Ensembl:
ENSDARG00000055502
UniProt:
A0AB40EC26
F1Q6M9
LinkDB
All DBs
Position
16:11166966..11222833
Genome browser
AA seq
2428 aa
AA seq
DB search
MYEHQATSTSPISSKPVTQLTLHINHLGSPQNSISQNTTPVIRNDLFKASTSDLDDSGNS
RSRLEIANIASTETSKGDRIMGDMLKSEVPSEVEKVIQMVEADGYGEQAPNSVRSSSTDT
ASEHSVDLEVLEPSCMQLNSGNHVRASRRFNPLNNSTLSVVLSPNHTQVEQEGSATVAET
LAKGLKNQRVLARRRPRRSLKEDEKLVKECIFICGVVRGSNKEQLNVELQINGEGTLLSY
PFHTLVSRPHQPIDLILDAPPPGNELVEVGTRVCVPYGGDKEKEWYREGVVAQVDSHSAC
PYMVLLQEEQKKERCSKEETKQTSSSVWVARQNLRLLVPPWDGVMREKEREEREHREEIE
VERELCQLSEGMDLVTAGPPRENCRFPSPDTGAHRYESTLSSSTSPAVVMVANNMFGLAS
RGENEGTENRERVREREHERKQLQTPEVDMEVLRLNMAPLRDSGGPLVSGGPKTGAPNQH
RQILSKPPGYPSPITVVRGISGTTLGSPQPTPSSVVLGSDGGNSHHISPSVPPSPSSRGS
LTPLDKTPTPSQTSTPVPGSSASSASSSRSRTPLSAVQQKYKKGDVVCTPNGIRKKFNGK
QWRRLCSREGCMKESQRRGYCSRHLSMRTKEMEGAVGERGSGGGGESSSGTVTPSDLRGR
ASSEFEWDETSRDSSETSSRGTDSRPRLGLPSLLPQDFSRFDFDECEAATMLVSLGSRSV
TPSFSPISNQSPFSPTPSPSASPLFGFHPANFSPITASPVLPHRRHKHPSGTNSGLPKHG
TGGTEREKDRHLSGIVPSFHPNLTFTVPMSPGKRRTDAPPPPVPLLQEYTKPDQEQSCRD
PSLVTNLCIISPQTTTVTHPQRLLSTTASSSPASPLSLESGSQCTISQQPLRDSPVIVRN
PEVPLIKFTELPLARVAEVDRTSFTENSQTGVHPETGLQVPVPINAASTNGSVLLQNPTS
TLVLVSTTSSIPNPNPAGLPTQPSATLACISVPSPVSGAGLIGAGDGGGQDKSCPATLQQ
PVPCHPAPTALLPLILPTETLHPVPCKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAP
TQSDPSAQPGEGQQTVSHPQTAALKKESQSGSVLKEIIEGAPNPSSRPTPSADELPPERE
KDAERERPDSETESDVDDPFFPGVLPDPPISASPGKRRSQSLSALPKDDKNSPGKREKDH
IRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEA
HFKAHPDWKWCNKDRKKSSSEGRGVPGGKDIRERSMSETTEPPSVSMGMELKGMGPGMVS
VSERVGGEGHGQLTRPRAFSQSAMHSLERSERGNPQALAELAQMCGDGSQVGGRGALSQT
QRGVSEDMTSDDERMVICEEEGDDDVIEDSYPGSSIDLKCKERVTDSDSENGSGDEGERK
RVFAPVICSSSYGPGHGRSVSLSSYPTSRRFSDTSSKRKRTIEAGDGEQREGEGGASQPS
AGQSILVSSGGGVSSMLGAVRVASTVVTNVVRPVVSTPVPIASKSPHDRKLAPSQTQLLI
GHGATGNTAAASAGGGGYYSSSSPSPINAPAGQAGLVTNLVLGGTFQAPPAVQLVTPPPP
SQNPASPAHSNGPLPLPVLQSHILPSGSLAPSSGQKPITQVQYILPTLSANNPKSPSPQQ
ASQPTSIFTLPTALPTHATLANGKQSGYVSSPVGVVSPGARVQTQSPVLQGKMLVPMATV
RAAPAPSPQFPLVAPPLPVQNGAQAGSKIIQIAPMPVVQSQLPSAGPVQPGSPFSVTMGT
ATVVAPGSTPSQTVLLPPPPTRITYVQSTPGVPSPLPLVPSTTGSSSQTVSAAPGSAYVS
SPLATFAAIAHPGQTLVQPLIAGQPSLLAPAQSPNPPHAPAITALYTPTNVTLATGVVSM
ATVSPSVVYTVSSSSSLSPHILPKHTTATSMTPVTLDRQVNVSVHSERQLHQERSLERQH
TDSQVYTLSSERQTEKGCLLQLDKHFQVPSKGSSSSVAPPSATSVPLQPGSPAQPSHSGS
APGTPKLITARPPQKVKATLANIPVGSYDGGGRGKEREKERDRDKEREREKDKDTSSRFS
FEVEKVEKIEKSNSPAEEGAPETPTHFGVETSAPSGRCKETNAKEVEKKDSHPSSPLPPP
SGSDPSPSQSHGDKDAPPKKVKARPPPLKRPFDSVDKVLSEVYFEERFAELPEFRPEEVL
PSPTLQSLATSPRAILGSYRRKRKNSTDLDSSTEDPISPKRKSRRRSSCSSEPNTPKSAA
KCEGDIFTFDRPDGEDILGELEFDKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAA
FQARYADIFPTKVCLQLKIREVRQKIMQTAAPSESAGISDLSLPGPSGVVTMDPALGADP
LEKEVEREGEQHSPEEPRNAGDSQDSSR
NT seq
7287 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaacatcaagctacaagtacctctcccattagttcaaaacctgtaacccagctc
actcttcatatcaaccatctaggttctccgcaaaattccatttctcagaacactactcct
gtaatcagaaatgatttatttaaagccagtacttctgatctggatgatagtgggaatagt
agaagtagactagaaatagccaatatagcaagcacagagacttcaaaaggagacagaatt
atgggtgacatgttaaaaagtgaggtgccttctgaagtagaaaaagtgatccaaatggtg
gaagcagatggatatggggagcaagccccaaattctgtgcgttcatcatccacagacaca
gccagtgaacactctgtggatctggaggtgcttgagccctcttgtatgcaactaaattca
gggaaccatgtaagagcatcaagaagatttaacccattgaacaattcaacgctgtctgtt
gtcctgtctcccaatcacacacaagttgaacaggaagggtctgcaacagtagccgaaacc
ctagctaaaggactgaaaaaccaaagggtgcttgcacgaagacgaccaagacgtagttta
aaagaagatgagaagttagttaaggaatgtatatttatatgtggtgtggtgagagggtcc
aataaagagcagttgaatgtagagttgcagattaatggggaggggacactcctctcgtat
ccattccatacattagtaagtcgtccacaccaacccattgacctcattttagacgcccca
cccccaggaaatgaacttgtggaggttgggacgcgtgtatgtgtgccttatggaggagat
aaagaaaaagagtggtacagagaaggtgtggttgctcaggtagactctcattcagcttgt
ccctacatggtgcttttacaggaggagcaaaagaaggagaggtgcagcaaggaggagacc
aaacagacatcaagtagtgtatgggttgcccgccagaacttgcgcctccttgttccacca
tgggatggggttatgagagaaaaagaaagagaggagagagagcacagagaggagattgaa
gttgaaagggaactatgtcagttaagtgagggaatggatttggtaactgcaggtccacct
agggagaattgcagattcccatctccagacacaggggctcatcgttatgaaagcacactt
tcatcttccacgtcaccagcagttgtgatggtagcaaacaatatgtttggcttagcatct
aggggggagaatgagggaactgagaatagggaaagagttagagaacgagaacatgagcga
aagcaattgcagactccagaagtggacatggaggttttgcgacttaacatggcaccactt
agagatagtggaggacctctagtctcaggaggaccaaaaacaggagctcctaatcagcac
agacaaattctttccaaacctcctgggtatccgagtcctatcacagtggtgcgaggcatc
tctgggacaactttaggaagtccacagccaaccccttcatctgtagttttagggtcagat
ggaggtaacagtcaccatatctcaccctctgtgcctccttcccccagctccaggggttct
ttgacacctctggataagactcctactccttcacagacctccaccccagttccagggagt
tctgcctcctctgcttcttcctcaaggtcaaggacacctttgtcagctgtccaacagaaa
tataagaaaggcgatgtagtttgtacacccaatggaatccgtaagaagttcaatggaaag
cagtggcggaggttgtgttcacgagaaggctgcatgaaagagtcccagcgtcgaggctac
tgttctcgtcacctctctatgcgtaccaaagaaatggagggagcagttggagagagagga
agtggaggaggtggagagagtagctcggggactgtgaccccttcagacttgcggggtcgt
gccagcagtgaatttgaatgggatgagacttctcgagatagcagtgagacaagcagccga
ggcactgactctcgtccacgtcttggcttgccatcgctgcttcctcaggatttctctcgt
tttgactttgatgaatgtgaggctgcaactatgctggtatctctgggttccaggtctgta
actccttcattttcaccaatttcaaatcagtccccattctcacctacaccttctccgtca
gcttcaccactttttggctttcaccctgcaaatttcagtccaattacagcctctccagtt
ttgcctcatcgccgccacaaacatcccagtggcaccaacagtggtctcccaaaacatgga
acagggggcacagaaagggagaaggatagacacttgtctggtatagtgccatcattccac
cccaatctaaccttcactgtacctatgagcccaggcaaacgcaggacggatgcccctcct
cccccagttccactattacaggaatataccaagcctgatcaggaacaaagctgtcgtgac
ccttctcttgtaaccaacctttgcattatctctcctcagaccactactgtcacacacccc
caaagactgctttcaaccactgcctcttcttcaccagcttctcccctaagcctagaatca
ggttcacaatgcaccatttcccagcagcctttgagagactctccagtaatagtgagaaat
cctgaggttcctttaataaagtttacagaactcccactggctagagttgcagaggtggac
aggaccagtttcacagaaaacagccaaactggtgtacatccagagacagggctacaggtt
cctgttccaattaatgctgcttccactaatggctctgtcctactccagaatcccacttca
actcttgttctagtgtctactacctcttccattccaaacccaaaccctgcaggtctacct
acgcaacctagcgccaccttagcctgcatatcagtgcctagccctgtttcaggggctggt
ctaattggtgcaggtgatggagggggacaagataagagttgcccagcgacactccagcag
ccggttccttgtcaccctgctcctactgccctgctgccactcattcttcccacagagacc
ttacatcctgtgccatgcaaagacatcatcatggggcgacctggaacagtgtggactaat
gttgagcccagatcggttccagtgtttccttggcattcattggtccctttcctggcaccc
acccaatcagatccatcggctcaacctggcgaaggccaacaaactgtcagccatccgcag
acggccgctctgaagaaagagtctcagagcgggtcagtgctgaaagagattatagaggga
gcacctaacccttcctcacgccccactccctccgctgacgaactccctccagagagagag
aaggatgcggagcgagagagacctgacagcgaaacagaaagtgacgtggatgatccgttt
ttccccggtgttcttcctgatcctccaatttctgcatctcctggaaagcgtagatctcag
tccctcagtgctctccccaaagatgacaagaacagtcctggcaagagggaaaaagatcat
atcaggaggcctatgaatgcatttatgatcttcagcaagcgacatcgcgcactggttcat
cagaggcacccgaatcaggacaaccgcactgtcagcaaaatactcggagagtggtggtac
gccctgggacccaaagaaaaacagaaataccacgacctcgcatttcaggtaaaagaggca
cactttaaggcacatcctgactggaagtggtgtaataaggacagaaagaaatccagcagc
gagggacgtggtgttccaggaggcaaagacatccgcgagaggagcatgtcagaaaccaca
gaacctccatctgtgtcaatggggatggagctcaaaggtatgggtcctggcatggtgagc
gtgtcagagcgagttggaggtgaggggcatggccagttgacccgtcctcgtgctttctct
cagagcgccatgcacagtctggagaggagcgagagaggcaatccacaggcactcgctgag
cttgcacagatgtgtggtgacggcagtcaggttgggggacggggtgctctctcccagacg
cagaggggggtaagcgaggacatgacgagtgacgacgagcgcatggttatatgtgaagaa
gagggggatgatgacgtcatcgaggactcgtatcctggcagctccattgacctgaagtgt
aaggagagggtgacagacagtgacagtgaaaatggatccggagatgaaggagaacgcaag
agggtgtttgctccagttatttgctcttcatcttacggtcctggtcatggtcggagcgtg
tctctctcctcctatcccacttctcgacgcttcagcgacacttcttcaaagagaaagcga
acaatagaggcaggtgatggagaacaaagggaaggtgaaggaggtgcttcccagccctct
gcgggtcagtccatcctggtcagttctggcgggggagtgtcatcaatgctaggagcagtc
agagtggcgtccactgtggtcactaacgtggtgcgtcctgtggtcagcacaccggtgccg
atcgccagcaagtcgccacatgacaggaaactcgccccgtcacaaacgcaacttcttatc
ggacatggtgccacaggaaacacagcagcagcttcagctggaggtggtgggtactattcc
tcatcatcgcccagtcctataaatgcaccagctggtcaagcgggacttgtgaccaatctg
gttttgggaggcacgtttcaggctccgcccgctgtacaacttgtcacgcctcctcctcct
tcacaaaacccagcttccccagctcatagtaatggtcctctgcctctgcccgtgctacag
tcacatattctcccctcgggctcattagctccctcatcaggccaaaaacctataacacag
gtccagtacattctccctaccctctctgccaacaatcccaagagcccctcccctcagcag
gccagtcagccaaccagtatcttcaccctgcccacagctctgcccactcacgccacactg
gccaacggaaagcagtcaggatacgtctccagtcctgtgggggtagttagtccaggagcc
agagtgcaaacacagtcgccagtcttgcagggcaagatgctggttcccatggcaacagtg
agggctgctcctgccccgtctccgcagtttcccctggtagcccctcctcttcctgttcag
aatggagcacaggcaggaagcaagattattcagatcgctccgatgccagtcgtgcagtct
cagctcccctctgcaggcccagtgcagcctgggagcccattttcagttactatgggaaca
gctacagtagtggccccaggctctaccccgtctcagaccgtgctgctaccgcctccacct
accagaatcacttatgtacagtccactcctggggttccttctcctttgccattagttccc
tcaactacaggctcctcgtctcagacagtttcagcagcacctggatctgcatatgtttcc
tcacccttggccacgtttgcagctatcgctcatccgggacagacactggtgcagccgctg
attgcaggtcagccatcactgctcgccccggcccagtctcccaacccccctcacgctcct
gctatcacagccctctacaccccaacaaatgtgacccttgcaactggggtggtatctatg
gccacagtgtctccgagtgttgtttacacagtgtccagttcttctagcctctctccacac
atccttcccaaacacaccacagcaacctccatgacccctgtcaccctggaccggcaggtg
aacgtttctgtgcactctgagcgacagttgcaccaggagagatccctagagcgacagcat
acagacagtcaggtctacacgctgtcctctgagagacagacggagaagggctgtctctta
cagttggacaagcacttccaggtcccaagcaaaggcagcagcagctctgttgcgccacca
tcggccacctcagtgccattgcaacctggaagccctgcacaaccctctcattctggaagt
gccccggggacacctaagctgatcacagcaaggcctcctcagaaagtgaaggccaccctg
gcaaatatcccagtgggcagttatgatggaggagggagaggcaaagagcgggagaaggag
agggacagagacaaggagagagagcgggagaaggacaaagacaccagtagtcgcttctca
tttgaggtagaaaaggtagagaagatagagaagtcaaactctcctgcagaggagggagct
ccagaaacacccacccactttggtgtggagacttctgcccctagtggacgttgcaaagag
acaaatgctaaggaggttgaaaagaaggactcccatccttcttctccattacctcctcca
tctggatcagatccttccccatcacagtctcatggtgataaagatgcaccacctaaaaaa
gtcaaggcccgtcccccacccctcaaacggccatttgattcggttgacaaggtcctgtcc
gaggtgtattttgaggagcgtttcgcagagctgccagaattccgtccagaggaggtcctg
ccatctccaaccctgcagagtctggccacctccccacgagccatactgggcagctatcgc
agaaagaggaaaaactccactgacctggactcatccactgaagatcccatctctcctaaa
cggaaaagccggcgcagatcgagctgcagttcagagcccaacacaccgaaaagtgctgca
aagtgcgagggagacattttcacctttgataggccagatggagaggatatactaggggag
ctggagtttgacaaggtgccctattcctctctcaggagaactcttgatcagaggagagct
cttgtcatgcagctattccaggatcatggcttcttcccctcagctcaagctactgctgcg
ttccaggcacggtatgctgatatcttcccaacaaaggtgtgtttacagctcaagattcga
gaggtccggcaaaagatcatgcaaacggcagctccatcagaatctgctggtatttcagac
ctttcattaccgggaccttccggagtggtgacaatggacccagctttaggggcagaccct
ctggagaaggaggttgagcgagagggtgaacaacacagcccagaggagcctagaaacgct
ggcgattcacaggactcctcaagatga
DBGET
integrated database retrieval system
