Danio rerio (zebrafish): 323246
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Entry
323246 CDS
T01004
Symbol
cicB
Name
(RefSeq) protein capicua homolog isoform X2
KO
K20225
capicua transcriptional repressor
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
323246 (cicB)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
323246 (cicB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Cic_C
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Tudor_5
Motif
Other DBs
NCBI-GeneID:
323246
NCBI-ProteinID:
XP_002664857
ZFIN:
ZDB-GENE-030131-1966
Ensembl:
ENSDARG00000055502
UniProt:
F1Q6M9
A0AB40EC26
LinkDB
All DBs
Position
16:11416439..11484944
Genome browser
AA seq
2623 aa
AA seq
DB search
MRPPKKQRGRSPLSARGKGTRKRGGKLDGHSQTTLPAPSHQKYTPSKEDNSLDKQIKSSN
MTNSEGLKEQIKERTMETSKSEENAGVGNKAKSPKNINTNNLTDNTDSIKIASNAHENSH
SNSTDICNTNTQNLTSTNSKSSNQHTNSTASNTQNTNNIGNSLNKSSSLSANHTSTTLSS
RKTATFKARVPKKKYMYEHQATSTSPISSKPVTQLTLHINHLGSPQNSISQNTTPVIRND
LFKANTSDLDDSGNSRSRLEIANIASTETSKGDRIMGDMLKSEVPSEVEKVIQMGEADGY
GEQAPNSVRSSSTDTASEHSVDLEVLEPSCMQLNSGNHVRASRRFNPLNNSTLSVVLSPN
HTQVEQEGSATVAETLAKGLKNQRVLARRRPRRSLKEDEKLVKECIFICGVVRGSNKEQL
NVELQINGEGTLLSYPFHTLVSRPHQPIDLILDAPPPGNELVEVGTRVCVPYGGDKEKEW
YREGVVAQVDSHSACPYMVLLQEEQKKERCSKEETKQTSSSVWVARQNLRLLVPPWDGVM
REKEREEREHREEIEVERELCQLSEGMDLVTAGPPRENCRFPSPDTGAHRYESTLSSSTS
PAVVMVANNMFGLASRGENEGTENRERVREREHERKQLQTPEVDMEVLRLNMAPLRDSGG
PLVSGGPKTGAPNQHRQILSKPPGYPSPITVVRGISGTTLGSPQPTPSSAVLGSDGGNSH
HISPSVPPSPSSRGSLTPLEKTPTPSQTSTPVPGSSASSASSSRSRTPLSAVQQKYKKGD
VVCTPNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKEMEGAVGERGSGGGG
ESSSGTVTPSDLRGRASSEFEWDETSRDSSETSSRGTDSRPRLGLPSLLPQDFSRFDFDE
CEAATMLVSLGSRSVTPSFSPISNQSPFSPTPSPSASPLFGFHPANFSPITASPVLPHRR
HKHPSGTNSGLPKHGTGGTEREKDRHLSGIVPSFHPNLTFTVPMSPGKRRTDAPPPPVPL
LQEYTKPDQEQSCRDPSLVTNLCIISPQTTTVTHPQRLLSTTASSSPASPLSLESGSQCT
ISQQPLRDSPVIVRNPEVPLIKFTELPLARVAEVDRTSFTENSQTGVHPETGLQVPVPIN
AASTNGSVLLQNPTSTLVLVSTTSSILNPNPAGLPTQPSATLACISVPSPVSGAGLIGAG
DGGGQDKSCPVTLQQPVPCHPAPTALLPLILPTETLHPVPCKDIIMGRPGTVWTNVEPRS
VPVFPWHSLVPFLAPTQSDPSAQPGEGQQTVSHPQTAALKKESQSGSVLKEIIEGAPNPS
SRPTPSADELPPEREKDAERERPDSETESDVDDPFFPSVLPDPPISASPGKRRSQSLSAL
PKDDKNSPGKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPK
EKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEGRGVPGGKDIRERSMSETTEPPSV
SMGMELKGMGPGMVSVSERVGGEGHGQLTRPRAFSQSAMHSLERSERGNPQALAELAQMC
GDGSQVGGRGALSQTQRGVSEDMTSDDERMVICEEEGDDDVIEDSYPGSSIDLKCKERVT
DSDSENGSGDEGERKRVFAPVICSSSYGPGHGRSVSLSSYPTSRRFSDTSSKRKRTIEAG
DGEQREGEGGASQPSAGQSILVSSGGGVSSMLGAVRVASTVVTNVVRPVVSTPVPIASKS
PHDRKLAPPQTQLLIGHGATGNTAAASAGGGGYYSSSSPSPINAPAGQAGLVTNLVLGGT
FQAPPAVQLVTPPPPSQNPASPAHSNGPLPLPVLQSHILPSGSLAPSSGQKPITQVQYIL
PTLSANNPKSPSPQQASQPTSIFTLPTALPTHATLANGKQSGYVSSPVGVVSPGARVQTQ
SPVLQGKMLVPMATVRAAPAPSPQFPLVAPPLPVQNGAQAGSKIIQIAPMPVVQSQLPSA
GPVQPGSPFSVTMGTATVVAPGSTPSQTVLLPPPPTRITYVQSTPGVPSPLPLVPSTTGS
SSQTVSAAPGSAYVSSPLATFAAIAHPGQTLVQPLIAGQPSLLAPAQSPNPPHAPAITAI
YTPTNVTLATGVVSMATVSPSVVYTVSSSSSLSPHILPKHTTATSMTPVTLDRQVNVSVH
SERQLHQERSLERQHTDSQVYTLSSERQTEKGCLLQLDKHFQVPSKGSGSSVAPPSATSV
PLQPGSPAQPSHSGSAPGTPKLITARPPQKVKATLANIPVGSYDGGGRGKEREKDRDRDK
EREREKDKDTSSRFSFEVEKVEKIEKSNSPAEEGAPETPTHSGVETSAPSGRCKETNAKE
VEKKDSHPSSPLPPPSGSDPFPSQSHGDKDAPPKKVKARPPPLKRPFDSVDKVLSEVYFE
ERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSSTEDPISPKRKSRR
RSSCSSEPNTPKSAAKCEGDIFTFDRPDGEDILGELEFDKVPYSSLRRTLDQRRALVMQL
FQDHGFFPSAQATAAFQARYADIFPTKVCLQLKIREVRQKIMQTAAPSESAGISDLSLPG
PSGVVTLDPALGADPLEKEVEREGEQHSPEEPRNAGDSQDSSR
NT seq
7872 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaccaaagaaacagagaggacgatcccctttatcggcaagaggaaaaggaaca
agaaaacgaggaggcaaacttgacggacattcacaaacaacactgcctgcaccttcacat
cagaaatacactccgtccaaagaagataactctctggacaagcaaatcaagagtagcaac
atgacaaacagtgaggggttaaaagagcaaatcaaagaaaggacaatggaaacctcgaag
tctgaagaaaatgcaggagtcgggaataaagcaaaaagccccaagaacattaacaccaac
aatttaacagataacacagactcaatcaaaatagccagcaatgcacatgaaaattcacat
agtaatagcacagacatatgtaacacaaacactcaaaaccttactagcacaaacagtaaa
agtagcaaccaacatacaaacagcactgctagcaatacacagaatacaaataatataggc
aacagtttaaataaaagcagctctttaagtgccaaccacacttccaccacactctccagt
cgaaagacagctacttttaaagcaagggtgcccaagaagaaatatatgtatgaacatcaa
gctacaagtacctctcccattagttcaaaacctgtaacccagctcactcttcatatcaac
catctaggttctccgcaaaattccatttctcagaacactactcctgtaatcagaaatgat
ttatttaaagccaatacttctgatctggatgatagtggaaatagtagaagtagactagaa
atagccaatatagcaagcacagagacttcgaaaggagacagaattatgggtgacatgtta
aaaagtgaggtgccttctgaagtagaaaaagtgatccaaatgggggaagcagatggatat
ggggagcaagccccaaattctgtgcgttcatcatccacagacacagccagtgaacactct
gtggatctggaggtgcttgagccctcttgtatgcaactaaattcagggaaccatgtaaga
gcatcaagaagatttaacccattgaacaattcaacgctgtctgttgtcctgtctcccaat
cacacacaagttgaacaggaagggtctgcaacagtagccgaaaccctagctaaaggactg
aaaaaccaaagggtgcttgcacgaagacgaccaagacgtagtttaaaagaagatgagaag
ttagtcaaggaatgtatatttatatgtggtgtggtgagagggtccaataaagagcagttg
aatgtagagttgcagattaatggggaggggacactcctctcgtatccattccatacatta
gtaagtcgtccacaccaacccattgacctcattttagacgccccacccccaggaaatgaa
cttgtggaggttgggacgcgtgtatgtgtgccttatggaggagataaagaaaaagagtgg
tacagagaaggtgtggttgctcaggtagactctcattcagcttgtccctacatggtgctt
ttgcaggaggagcaaaagaaggagaggtgcagcaaggaggagaccaaacagacatcaagt
agtgtatgggttgcccgccagaacttgcgcctccttgttccaccatgggatggggttatg
agagaaaaagaaagagaggagagagagcacagagaggagattgaagttgaaagggaacta
tgtcagttaagtgagggaatggatttggtaactgcaggtccacctagggagaattgcaga
ttcccatctccagacacaggggctcatcgttatgaaagcacactttcatcttccacgtca
ccagcagttgtgatggtagcaaacaatatgtttggcttagcatctaggggggagaatgag
ggaactgagaatagggaaagagttagagaacgagaacatgagcgaaagcaattgcagact
ccagaagtggacatggaggttttgcgacttaacatggcaccacttagagatagtggagga
cctctagtctcaggaggaccaaaaacaggagctcctaatcagcacagacaaattctttcc
aaacctcctgggtatccgagtcctatcacagtggtgcgaggcatctctgggacaacttta
ggaagtccacagcccaccccttcatctgcagttttagggtcagatggaggtaacagtcac
catatctcaccctctgtgcctccttcccccagctccaggggttctttgacacctctggaa
aagactcctactccttcacagacctccaccccagttccagggagttctgcctcctctgct
tcttcctcaaggtcaaggacacctttgtcagctgtccaacagaaatataagaaaggcgat
gtagtttgtacacccaatggaatccgtaagaagttcaatggaaagcagtggcggaggttg
tgttcacgagaaggctgcatgaaagagtcccagcgtcgaggctactgttctcgtcacctc
tctatgcgtaccaaagaaatggagggagcagttggagagagaggaagtggaggaggtgga
gagagtagctcggggactgtgaccccttcagacttgcggggtcgtgccagcagtgaattt
gaatgggatgagacttctcgagatagcagtgagacaagcagcagaggcactgactctcgt
ccacgtcttggcttgccatcgctgcttcctcaggatttctctcgttttgactttgatgaa
tgtgaggctgcaactatgctggtatctctgggttcaaggtctgtgactccttcattttca
ccaatttcaaatcagtccccattctcacctacaccttctccgtcagcttcaccacttttt
ggctttcaccctgcaaatttcagtccaattacagcctctccagttttgcctcatcgccgc
cacaaacatcccagtggcaccaacagtggtctcccaaaacatggaacagggggcacagaa
agggagaaggatagacacttgtctggtatagtgccatcattccaccccaatctaaccttc
actgtacctatgagcccaggcaaacgcaggacggatgcccctcctcccccagttccacta
ttacaggaatataccaagcctgatcaggaacaaagctgtcgtgacccttctcttgtaacc
aacctttgcattatctctccacagaccactactgtcacacacccccaaagactgctttca
accactgcctcttcttcaccagcttctcccctaagcctagaatcaggttcacaatgcacc
atttcccagcagcctttgagagactctccagtaatagtgagaaatcctgaggttccttta
ataaagtttacagaactcccactggctagagttgcagaggtggacaggaccagtttcaca
gaaaacagccaaactggtgtacatccagagacagggctacaggttcctgttccaattaat
gctgcttccactaatggctctgtcctactgcagaatcccacttcaactcttgttctagtg
tctactacctcttccattctaaacccaaaccctgcaggtctacctacgcaacctagcgcc
accttagcctgcatatcagtgcctagccctgtttcaggggctggtctaattggtgcaggt
gatggagggggacaagataagagttgcccagtgacactccagcagccggttccttgtcac
cctgctcctactgccctgctgccactcattcttcccacagagaccttacatcctgtgcca
tgcaaagacatcatcatggggcgacctggaacagtgtggactaatgttgagcccagatcg
gttccagtgtttccttggcattcattggtccctttcctggcacccacccaatcagatcca
tcggctcaacctggcgaaggccaacaaactgtcagccatccgcagacggccgctctgaag
aaagagtctcagagcgggtcagtgctgaaagagattatagagggagcacctaacccttcc
tcgcgccccactccctccgctgacgaactccctccagagagagagaaggatgcggagcga
gagagacctgacagcgaaacagaaagtgacgtggatgatccgtttttccccagtgttctt
cctgatcctccaatttctgcatctcctggaaagcgtagatctcagtccctcagtgctctc
cccaaagatgacaagaacagtcctggcaagagggaaaaagatcatatcaggaggcctatg
aatgcatttatgatcttcagcaagcggcatcgcgcgctggttcatcagaggcacccgaat
caggacaaccgcactgtcagcaaaatactcggagagtggtggtacgccctgggacccaaa
gaaaaacagaaataccacgacctcgcatttcaggtaaaagaggcacactttaaggcacat
cctgactggaagtggtgtaataaggacagaaagaaatccagcagcgagggacgtggtgtt
ccaggaggcaaagacatccgcgagaggagcatgtcagaaaccacagaacctccatctgtg
tcaatggggatggagctcaaaggtatgggtcctggcatggtgagcgtgtcagagcgagtt
ggaggtgaggggcatggccagttgacccgtcctcgtgctttctctcagagcgccatgcac
agtctggagaggagcgagagaggcaatccacaggcactcgctgagcttgcacagatgtgt
ggtgacggcagtcaggttgggggacggggtgctctctcccagacgcagaggggggtaagc
gaggacatgacgagtgacgacgagcgcatggttatatgtgaagaagagggggatgatgac
gtcatcgaggactcgtatcctggcagctccattgacctgaagtgtaaggagagggtgaca
gacagtgacagtgaaaatggatccggagatgaaggagaacgcaagagggtgtttgctcca
gttatttgctcttcatcttacggtcctggtcatggtcggagcgtgtctctctcctcctat
cccacttctcgacgcttcagcgacacttcttcaaagagaaagcgaacaatagaggcaggt
gatggagaacaaagggaaggtgaaggaggtgcttcccagccctctgcgggtcagtccatc
ctggtcagttctggcgggggagtgtcatcaatgctaggagcggtcagagtggcgtccact
gtggtcactaacgtggtgcgtcctgtggtcagcacaccggtgccgatcgccagcaagtcg
ccacatgacaggaaactcgccccgccacaaacgcaacttcttatcggacatggtgccaca
ggaaacacagcagcagcttcagctggaggtggtgggtactattcctcatcatcgcccagt
cctataaatgcaccagctggtcaagcgggacttgtgaccaatctggttttgggaggcacg
tttcaggctccacccgctgtacaacttgtcacgcctcctcctccttcacaaaacccagct
tccccagctcatagtaatggtcctttgcctctgcccgtgctacagtcacatattctcccc
tcgggctcattagctccctcatcaggccaaaaacctataacacaggtccagtacattctc
cctaccctctctgccaacaatcccaagagcccctcccctcagcaggccagtcagccaacc
agtatcttcaccctgcccacagctctgcccactcacgccacactggccaacggaaagcag
tcaggatacgtctccagtcctgtgggggtagttagtccaggagccagagtgcaaacacag
tcgccagtcttgcagggcaagatgctggttcccatggcaacagtgagggctgctcctgcc
ccgtctccgcagtttcccctggtagcccctcctcttcctgttcagaatggagcacaggca
ggaagcaagattattcagatcgctccgatgcccgttgtgcagtctcagctcccctctgca
ggcccagtgcagcctgggagcccattttcagttactatgggaacagctacagtagtggcc
ccaggctctaccccgtctcagaccgtgctgctaccgcctccacctaccagaatcacttat
gtacagtccactcctggggttccttctcctttgccattagttccctcaactacaggctcc
tcgtctcagacagtttcagcagcacctggatctgcatatgtttcctcacccttggccacg
tttgcagctatcgctcatccgggacagacactggtgcagccgctgattgcaggtcagcca
tcactgctcgccccggcccagtctcccaacccccctcacgctcctgctatcacagccatc
tacaccccaacaaatgtgacccttgcaactggggtggtatctatggccacagtgtctccg
agtgttgtttacacagtgtccagttcttctagcctctctccacacatccttcccaaacac
accacagcaacctccatgacccctgtaaccctggaccggcaggtgaacgtttctgtgcac
tctgagcgacagttgcaccaggagagatccctagagcgacagcatacagacagtcaggtc
tacacgctgtcctctgagagacagacggagaagggctgtctcttacagttggacaagcac
ttccaggtcccaagcaaaggcagcggcagctctgttgcgccaccatcggccacctcagtg
ccattgcaacctggaagccctgcacaaccctctcattctggaagtgccccggggacacct
aagctgatcacagcaaggcctcctcagaaagtgaaggccaccctggcaaatatcccagtg
ggcagttatgatggaggagggagaggcaaagagcgggagaaggatagggacagagacaag
gagagagagcgggagaaggacaaagacaccagtagtcgcttctcatttgaggtagaaaag
gtagagaagatagagaagtcaaactctcctgcagaggagggagctccagaaacacccacc
cactccggtgtggagacttctgcccctagtggacgttgcaaagagacaaatgctaaggag
gttgaaaagaaggactcccatccttcttctccattacctcctccatctggatcagatcct
ttcccatcacagtctcatggtgataaagatgcaccacctaaaaaagtcaaggcccgtccc
ccacccctcaaacggccatttgattcggttgacaaggtcctgtccgaggtgtattttgag
gagcgtttcgcagagctgccagaattccgtccagaggaggtcctgccatctccaaccctg
cagagtctggccacctccccacgagccatactgggcagctatcgcagaaagaggaaaaac
tccactgacctggactcatccactgaagatcccatctctcctaaacggaaaagccggcgc
agatcgagctgcagttcagagcccaacacaccgaaaagtgctgcaaagtgcgagggagac
attttcacctttgataggccagatggagaggatatactaggggagctggagtttgacaag
gtgccctattcctctctcaggagaactcttgatcagaggagagctcttgtcatgcagcta
ttccaggatcatggcttcttcccctcagctcaagctactgctgcgttccaggcacggtat
gctgatatcttcccaacaaaggtgtgtttacagctcaagattcgagaggtccggcaaaag
atcatgcaaacggcagctccatcagaatctgctggtatttcagacctttcattaccggga
ccttccggagtggtgacactggacccagctttaggggcagaccctctggagaaggaggtt
gagcgagagggtgaacaacacagcccagaggagcctagaaacgctggcgattcacaggac
tcctcaagatga
DBGET
integrated database retrieval system
