KEGG   Danio rerio (zebrafish): 323299
Entry
323299            CDS       T01004                                 
Symbol
atrX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
  KO
K10779  transcriptional regulator ATRX
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    323299 (atrX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    323299 (atrX)
   03036 Chromosome and associated proteins [BR:dre03036]
    323299 (atrX)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    323299 (atrX)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    323299 (atrX)
SSDB
Motif
Pfam: SNF2-rel_dom ADD_ATRX Helicase_C
Other DBs
NCBI-GeneID: 323299
NCBI-ProteinID: XP_021336651
ZFIN: ZDB-GENE-030912-11
Ensembl: ENSDARG00000042236
UniProt: A0A8M9QKH6
LinkDB
Position
14:11222167..11304220
AA seq 2053 aa
MTTDICRSSKLNTLVTKLHEFLGHSPDIESIDSQDISSGKMATNDVNIADEKMNEPGCSS
EITKPSSSRSKRKPSFVTKHTALDESECANESGGEPCADDSMQSSLDISKLPQGTVVVKP
EPVANETKDEFRGPEFRNKGGKAKEEGARKRPDDQLQEIFNCTACGQQVNHFQKDSIFQH
PALHVLICKSCFKYYMSDDISKDDEGMDEQCRWCAEGGNLMCCDYCSNAFCKKCILRNLG
RKELSEIMSEQSKWHCYICCPEPLQDHVKTCEKVLLNLESSSRKPKGEHDKTKREERKHK
HVKREKTVVNGQDYASDGAGTLTFSCKTLTVPKELVKKTKKLIETTNGLNRTFVQFLQQT
SKGQEASAVSYRHLKAFKSVLADLKKAHAALEESLENEFESKGLKFQNGEEQRPSNSQSV
ENAVVNSNHTEPTPVKEDDLDCSTKNHNPVGEEETQQDSNLADVEMESPPHSPEKAQEQS
EERSEEKENEEKENGEKENEAKEQEIADNFEEGSVPPAEESLDKDIVSIPPSVPEELFEM
VESLAVKKENNDDNLTDSSDNKSNTEVVESKKSLTKLGKKLVVKLTPVPLKITIKRDKSR
EQSPSEDMDGEALKDGQDSRRSPRMKTTPLRKSPEAKSKRKLNMSKADEKSSDAVKEQSD
SDSDEVPEVLQSAALKDSSDESEPENTSPKRTKKRRLSSRSTAKPKTKRKLEEGSSESDD
SEKPSAAKKRSAKKKKGKESDSSNHNSDLEKEIKKLSKVDSGKKKSKSTKKDEDEGSKEV
KKGPKRSFERKRRSQREKAKTKEESSSSDEEEEEEKQADNSGEDSDQQKIKPILESVIAS
IDGFHQSSGDEVELKNEASQVVDDDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADK
EDGDSTKKEKDNAKKEDESDSDEETTSDSGSDVDLKKGGRRHRLLRKKLSLSEGESDEEN
AVKNKKETKKRGRRKVDSDDSADSDFKHSRSDSSDASALSEAVSEDEDDEKSTKRKTRSS
KKAAKDKERSYKKEKKKRRRIKVQESSSSGKSGEEEGEEGDEDDKGTPKGRKKIRKIIKD
DKLRTETRDALKEEEDRRKRIAERERLREKLRETIEVKESSQVTCPITTKLVLDEDEETK
EPLVQVHRNMVTKLKPHQVDGVQFMWDCCCESVRKVEKSAGSGCILAHCMGLGKTLQVVT
LLHTVLLCEKLNFSTALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVTELATVKRPQERA
YALQRWQEDGGVMIMGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHVLKN
EASAVSKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQN
GQCADSTLVDVRVMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAVRLSPIQCKL
YRYYLDHFTGVGSALESGKGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDS
MEEFIASETEESSMSLTSEDEKPKRKKKRGRGKDQSSDKSDSDDLEVIKEWNTSSRGGNP
EGRNRAEPVEEVRPSNSGPGSPSPEWYKEFVSEEDAEVLTHSGKMVLLFEILRLAEEVDD
KVLVFSQSLISLDLIEDFLELAGRAKEEGKESPYKGEGKWFRNIDYYRLDGSTNALTRKK
WAEDFNDISNVRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQV
KTVYVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELTELYTFEPDQLDD
PSEKKSKRATPMLPKDPVLAELLHSYKDHIVCYHEHDSLLDHKEEEALSEEDRKAAWAEY
EAEKKGLSMRFNQPSYSQMGMGAPNSYFPFNVAALASMSNQQLEDLINQGRQKVLEASSA
LKTVPREALEDIVAQVWKENPSLPEAQVHSMALGRQAGFELEVKHREAIYRDVLSKQQTL
MMYVQKVLANRKVQEQQLAMARQGMLLNQLAMQNGLTGPMNQMDLLGLYQQLGALQGLPT
PQLGKNPGPSKGL
NT seq 6162 nt   +upstreamnt  +downstreamnt
atgaccaccgacatctgcaggtcaagtaaactgaatacattggtgactaaacttcatgag
ttcttgggtcattctccagacatcgaaagcattgattctcaagacatttccagtggtaaa
atggcaaccaatgacgtaaatattgctgatgagaagatgaacgagcctggttgctcctcc
gaaattaccaaaccttcgtcttcacgctcaaagagaaaaccatcatttgtgaccaagcac
actgccttagatgaatctgaatgtgcgaatgagagtggaggtgaaccctgcgcagatgac
agcatgcagagcagtttggatattagcaagctgccacaaggcacagtagtggtgaagcca
gaaccagttgctaatgaaactaaagatgaattccgaggtcctgagttccgtaacaaggga
ggcaaagcgaaagaagagggtgcgcggaaacgtcctgacgaccagctccaggaaatattc
aattgtacagcatgtggacagcaagtcaatcactttcagaaggattcgatctttcaacat
ccagcacttcatgttcttatctgcaagtcatgtttcaaatattacatgagtgatgatatc
agcaaggatgatgaaggcatggatgaacagtgcagatggtgtgcagaaggtggtaatctg
atgtgctgcgactactgtagcaatgccttctgcaaaaaatgcatcttgcggaaccttgga
cgaaaagagctgtctgaaataatgagtgaacaaagcaaatggcactgctatatttgctgc
ccagagccactgcaagatcatgtgaaaacttgtgagaaagttttgctcaatcttgaatcc
tcttctagaaaacctaagggagaacacgacaagacaaagcgtgaagagcgcaaacacaag
catgtgaaacgagaaaaaactgttgtaaatggacaggattatgcctctgatggagcagga
actctaaccttttcctgtaagacattgacagttccgaaagagcttgtcaaaaagaccaaa
aaactaattgagaccacaaatggtttgaatcgtacttttgtacagttcctccagcaaaca
tcaaaaggccaagaagccagtgcagtaagttacagacacttaaaggccttcaaatcagta
ttggctgatctgaaaaaggcccatgctgctctggaggaatcgcttgaaaatgaatttgaa
tcgaaaggcctcaagtttcagaacggagaggagcaacgaccatcaaacagtcaaagtgtg
gaaaacgcagtcgtcaactcgaaccataccgagcccacacctgtcaaggaagatgacttg
gattgctccaccaagaaccataatcctgtgggagaagaggaaacccagcaggacagtaac
ttggctgatgttgagatggaaagccctccacactcaccagaaaaagcacaggagcaatct
gaagaaaggtctgaagagaaagagaacgaagagaaagagaacggagagaaagagaacgaa
gctaaagagcaggaaatagcggacaactttgaagaaggctccgtaccacctgctgaagaa
tctcttgataaagacattgtgtctattccaccttctgtcccagaggaactcttcgagatg
gtagagagtcttgcagtaaagaaagaaaacaatgatgacaacttgactgattctagtgat
aacaaatccaacactgaggttgtggaatccaagaagagccttacaaaactgggtaaaaaa
ctagttgtcaagctaacacccgttcctcttaaaattaccataaaacgagataagagcagg
gaacagtcaccgtcagaagacatggatggtgaggcgttgaaggatggtcaagatagcaga
cgctctccgaggatgaagaccacacctttgcgcaagtcaccagaggcgaagagcaagcgt
aaactaaatatgtcaaaggcagatgaaaagagcagtgacgctgtcaaggaacagagtgat
tcagactctgatgaagtcccagaagttctgcagagtgctgctttgaaggacagctccgat
gagagtgaacccgaaaacacttctcccaagcgtaccaaaaagcgaaggttatcttcccgc
tctactgcaaaaccgaagacaaagcgcaaacttgaggagggctcctcagaatcagatgat
agtgaaaagccttcagcagcaaagaaaagaagcgccaaaaagaagaagggcaaggaatcc
gattcttcaaaccacaactctgatcttgagaaggagataaaaaaactgtccaaggttgat
agtgggaaaaaaaaatccaaaagcaccaaaaaggatgaggatgaaggcagtaaagaggtc
aagaaaggccctaaaaggtcgttcgagcgcaagcgaaggtcacagagagaaaaggctaaa
accaaggaagagtcttcctccagtgacgaagaggaggaggaggagaagcaggctgataac
tcgggagaagacagtgatcagcagaagattaaaccaattcttgagtctgttatcgctagc
atcgatggtttccatcagtcatcaggtgatgaagttgagttaaagaatgaagcttctcag
gtcgtggatgatgatgacgaccctgaaaatagaattgccaaaaggatgcttctggcccag
atcaaggccaactattcctctggagctgacagttcatcagatgacgaaaatgcagacaaa
gaggacggggattcgacaaaaaaagaaaaagataatgctaagaaggaagacgaaagtgac
tctgatgaggagacgacttcagactctggctcagatgtggacttgaagaaaggtggacgc
agacaccgtttgctacgcaagaagttgagtctaagcgagggcgagtctgatgaggagaac
gctgtcaaaaacaagaaagaaaccaaaaagagaggcagacggaaagtggacagcgatgat
tcagcagactccgactttaagcattcgcgctcagactccagtgatgcttcggctctcagt
gaggctgtgagtgaagatgaagatgacgagaagagcactaaacgcaaaacgcggtcatcc
aaaaaagctgcaaaggacaaagaaagaagttacaagaaagagaagaaaaaacgccgccgc
attaaggttcaagaatcctcatccagtggcaagagtggagaggaggagggtgaagaaggt
gatgaggatgataaaggaactcccaaaggtcgcaagaagattcgcaagatcattaaagat
gacaaactgcggacagagacccgcgatgccctgaaagaggaagaggacagaaggaaacgc
attgctgaaagggagcgcttgagggaaaaactgcgagagactattgaagtaaaggaatca
tcacaggtcacgtgtcccatcaccaccaagctggtgcttgacgaggacgaggagaccaag
gaaccactagtgcaggttcataggaacatggtgaccaaactcaaaccacatcaggtggat
ggtgtgcagttcatgtgggactgttgctgtgagtcagtgaggaaggtggagaagtctgca
gggtctggctgcattcttgcccattgcatgggtctgggaaaaaccctccaggtggtgacg
cttctccacactgtactgctgtgcgagaagctgaacttctccactgctctggtagtgtgt
ccactcaacactgtgctcaactggcttaatgagtttgagaaatggcaagaaggccttaag
gatgaggagagtttagaggtgacggagttggccacagtgaagagacctcaagagagagcg
tatgctttacagcgctggcaggaagatggtggtgtcatgatcatgggctacgagatgtac
cgcaacctgacgcaaggacgaaacatcaagagcaaaaagctgaaagagacctttcagaaa
actcttgttgatccaggtccagattttgtcatctgtgatgaaggtcacgtgttaaagaat
gaagcgtctgcagtctccaaagccatgaactctatcaagactcgtcgacgagtggtgcta
acaggaactccactgcagaacaacctgatcgagtatcactgtatggtaaacttcatcaag
gagaacttgctgggatcagtgaaagagttcagaaaccgcttcatcaaccccatccagaat
ggccagtgtgctgactccacgctcgttgatgtccgtgtcatgaagaaacgtgcgcacatt
ctctacgagatgcttgctggatgtgtccaaagaagagattacactgcccttactaaattc
ctgccaccaaaacatgagtatgtgttagcggtgaggttatcgcccatccagtgcaagctt
tatcgatactatctggaccacttcacaggtgtcggttctgccttggagagtggaaaaggc
cgtgcggggaccaaactcttccaggatttccagatgctcagtagaatctggacccatcca
tggtgtctccagctggactatatcagtaaagaaaacaagggatacttcgatgaggacagc
atggaggagttcatagcctcagaaacagaggagtcatctatgagtttgacctctgaagat
gagaagcccaaaaggaagaagaagcgaggcagaggaaaagatcagagctcagacaagtct
gacagcgatgacctggaagtgattaaggagtggaacaccagctctcgtggaggaaaccct
gaggggcggaacagagcagagcctgtggaggaggttcgtccttcaaactcaggtcctggc
agtccttcaccagaatggtacaaagagtttgtgtctgaggaagatgctgaggtgctgact
cactctggaaaaatggtgctactttttgagatcctccgcttggctgaagaagtggacgat
aaagtattggtgttcagccagtctctcatttctcttgacctcattgaagactttctggag
ttagcaggcagggccaaagaggaggggaaagaatcaccatacaaaggggagggcaagtgg
tttagaaacattgattactaccgtttggatggttccacgaatgccttgaccaggaagaaa
tgggcagaggatttcaatgacatcagtaatgttcggggtcgattgttcctcatctcaacc
agagctggttcacttggaatcaacttggtagccgcaaacagggtcataatttttgatgcc
tcatggaacccatcttatgacatccagagtattttcagagtctaccgctttggtcaagtg
aagactgtatatgtctacaggtttttggctcagggaaccatggaggaaaagatctatgac
cggcaggtcgccaaacagtcactgtctttcagagtggtagaccaacagcagattgaacgg
cactttacaatgaatgagctgacggagctctacacatttgaacccgaccagctggacgat
ccctctgagaagaagagcaagcgagccacacctatgctgcccaaggatcctgtcttagca
gaattgcttcacagctacaaagatcacatcgtttgttaccacgaacatgactctttgctt
gaccacaaagaggaagaagcactgagtgaggaagataggaaggcagcctgggctgaatat
gaagcagagaagaaggggctgtccatgcgtttcaaccagccgtcttattctcagatgggt
atgggagcaccaaactcctacttccccttcaacgtggccgccttggcctcaatgagcaac
caacagttggaggatttgattaaccaaggtcgacagaaagtgttggaagcatctagtgct
ctgaagacggtgcctagggaagcactggaggacattgttgcacaagtgtggaaggagaat
ccaagtttaccagaggcccaggttcactccatggctcttgggaggcaggctgggttcgag
ctggaagtcaaacacagggaggccatttatcgtgatgtcctcagcaagcaacaaactcta
atgatgtacgtgcagaaggtgcttgccaaccggaaggtccaggagcagcagttggccatg
gcgagacaaggaatgctgctaaaccagctagccatgcagaatggtcttacaggccccatg
aatcagatggatctgctggggttgtaccagcagctcggagccctccagggccttcccacc
ccacagctgggcaagaacccaggcccatctaagggtctgtaa

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