Danio rerio (zebrafish): 323579
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Entry
323579 CDS
T01004
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc)
KO
K04646
clathrin heavy chain
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04142
Lysosome
dre04144
Endocytosis
dre05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
323579 (cltca)
04142 Lysosome
323579 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
323579 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
323579 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
323579 (cltca)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
323579 (cltca)
Exosome [BR:
dre04147
]
Exosomal proteins
Proteins found in most exosomes
323579 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
323579
NCBI-ProteinID:
NP_001005391
ZFIN:
ZDB-GENE-030131-2299
Ensembl:
ENSDARG00000043493
UniProt:
F1R966
Q6DRI2
B3DK43
LinkDB
All DBs
Position
10:complement(33231032..33291502)
Genome browser
AA seq
1680 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFGQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QQFPKKAVDVFFPPEAQNDFPVAMQISSKHDVVYLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHDATAGIIGVNRKGQVLSVCVEEENIIQYITNVLQNPDLALRMAVRNNLAGA
EELFGRKFNNLFAGGNFAEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPDQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLVQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGTCDQELINVCNENSLFKSLSRYLVRRRDPELWASVL
LETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISSELFEEAFAIFKKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKESIDSYIKADDPSAYMEV
VQAADQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMMS
HPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFRPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFISEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLDE
NKKECFAACLFTCYDLLRPDVVLETSWRNNIMDFAMPYFIQVMREYLSKVDKLETSESLR
KEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQGYGYGYTAAPGYPPQAPQAQPGFGYGM
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcccatcagattccaggagcacctgcagctccaaaatttggggatc
aacccagccaacatcgggttcagcaccctgacaatggaatcggataagttcatctgtgtc
cgggagaaggttggagaacaggcgcaggtggtgatcattgatatggcggacccaaacacc
cccatccgcaggcccatctctgcagatagtgccatcatgaaccctgcgagcaaagtcatt
gccctcaaagctgccaaaacccttcagatctttaatatcgagatgaagagtaagatgaaa
gcccacaccatgaccgatgacgttactttctggaagtggatctccctcaacactgttgcc
ctcgtgaccgataacgccgtctatcattggagcatggagggagactctcagccggtcaaa
gtgtttgacagacattccagtctggcaggctgtcaaatcatcaactaccgcactgatgcc
aagcagaagtggctgctgctcattggcatttctgctcagcaaaacagagttgttggagcc
atgcagctctactctgttgataggaaagtgtcacagcctattgaggggcacgccgctggc
tttggtcaattcaaaatggagggaaacactgaagaatccactctcttttgtttcgctgtg
cgaggtcaggcaggcggaaagcttcacattattgaagtgggcacaccaccaacaggcaac
cagcaattcccaaagaaagctgtggatgtgttcttcccgccagaagcccagaatgacttc
cctgtagccatgcagatcagctccaaacatgatgttgtgtatctcatcactaaatatggc
tacattcatctgtatgacctggagacgggcacctgcatctacatgaaccgaatcagcggg
gagaccatttttgtgactgcgccccatgatgccacagctgggattatcggcgtcaacagg
aaaggacaggtgttgtcagtgtgtgttgaggaggaaaacatcatccagtacattaccaat
gtgctgcagaatccagacctggctttacggatggcagtccgcaataatctggctggagct
gaggagctgttcggacgcaagtttaacaacctctttgccggtggaaattttgcagaggca
gctaaagtagctgctaatgctccaaagggtatcctgcgcacccctgacaccatacgccgg
ttccagagtgtcccggctcaaccaggccagacgtccccactgctgcagtattttgggatc
ctcctggaccagggccagctcaacaagtttgagtctttggagctctgcagacccgtcctt
cagcagggccgcaaacaactgctggagaaatggctgaaggaggacaagcttgaatgctca
gaggagctgggtgacctggtgaagtctgtggacccgactcttgctctcagcgtctatctg
agggccaacgtacccaacaaagtcattcagtgttttgcagaaactggccagttccctaag
attgtcctgtacgccaaaaaggtgggctacactccagactggatcttcctgctgaggaac
gtgatgcggatcagtccagatcagggtctgcagtttgctcagatgcttgttcaggacgag
gaaccgctggctgacatcacacagatcgttgatgtgtttatggagtataacctggtccag
cagtgcacttccttccttttagatgctttgaagaacaaccggccatcagaaggaccactg
cagacccgtctgctggagatgaacctgatgcacgcaccacaggttgcagatgccatccta
ggaaaccagatgttcaccaactacgatcgtgcccacatcgcccaactgtgtgagaaagca
ggacttcttcagagagctttagagcattacaccgacttgtatgacatcaaacgagctgtc
gtgcacacacacctgctcaacccggagtggctggtcaactactttggctctctgtcagtg
gaggactctctggagtgtctgagggccatgctgtctgctaacatcagacagaatctccag
atctgcgtccaggtggcgtccaagtatcacgagcagctgagcacacagtccctcaccgag
ctctttgagtcgttcaagagttttgagggcctcttctactttctcggctcaatcgtaaac
ttcagccaggacccagaggtgcatttcaaatacatccaggccgcatgcaagacgggccaa
atcaaagaggtggagcgcatctgtcgggaaagcaactgctacaaccctgaacgtgtcaag
aactttctcaaggaagctaaactcactgaccagctgcctctcattattgtgtgcgatcgc
ttcgacttcgtccacgaccttgttctttacctgtacagaaacaacctgcagaagtacatc
gaaatctacgtccagaaggtaaacccaagccgtctgcctgtggtgattggaggtctgctg
gatgtggactgctctgaggatgtcatcaaaaacctgatcctggttgtacggggacagttt
tccaccgatgagctggtggcagaagtggagaagagaaacagactgaagctgttgttgccc
tggctggagtctcgtatccacgagggctgtgaggagccagctacccacaatgccctggcc
aagatctacatcgacagcaacaacaacccagaacgcttcctgcgggagaacccatactac
gatagccgcgtggtggggaaatactgcgaaaaacgagaccctcatctggcctgtgtggcc
tatgagagaggaacgtgtgaccaggagctgatcaacgtttgcaatgagaactcgctgttc
aagagtttgtcccgctatctggtgcgccgcagggaccctgagctatgggccagtgtgctt
ctggagaccaaccccttcaggaggccccttattgaccaggtggtgcagacagccctgtca
gagactcaggacccagaggaggtgtcagtcacagtgaaggccttcatgactgctgacctg
cccaatgaactcattgagctgctggaaaagattgtcctggacaactccgtcttcagtgaa
cacagaaatctgcagaacctgctcatcctaacagccatcaaagctgaccgtactcgggtc
atggagtacatcaaccgcctggacaactatgatgccccagacatcgccaacatcgccatc
agcagcgagctgtttgaggaggccttcgccatcttcaagaaattcgatgtcaacacctct
gcagtgcaggttctgatcgagcacattggtaatctggaccgggcgtatgagtttgcggag
cgctgcaatgaacctgcggtgtggagtcaactggccaaggctcagcttcagaagggtctc
gtcaaagagtccatcgactcctacatcaaagctgatgatccttcagcttacatggaagtg
gtccaagctgctgaccaaagtgggaactgggaggacctggtgaagtttctgcagatggcc
agaaagaaggccagagagtcttacgtggagactgagctgatcttcgctctggccaaaacc
aaccgtctcgctgaactggaggagtttatcaatggaccaaataatgcacacatccagcag
gttggagatcgctgctatgatgagaagatgtacgaggcggccaaacttctctacaataac
gtctccaacttcggccgcttggcttccactctggtccacttgggcgagtatcaagccgct
gtcgacggtgcccgcaaggccaacagcactcgcacatggaaagaggtttgctttgcctgt
gtggatggaaaggagttcagattggctcaaatgtgcggccttcatatcgtggttcacgca
gatgaattggaagagctcatcaactactatcaggaccgtggctactttgaggagctgatc
accatgctggaagcggcgctggggttggagcgcgctcatatgggcatgttcacagagctc
gccatcctctactccaaattcaagccacagaagatgagggagcacctggagctcttctgg
tccagagtcaacatcccaaaggttttgagggctgcagagcaggctcacctgtgggcagaa
ctggttttcctgtacgacaagtatgaagagtttgataacgccatcatcaccatgatgagc
catcccacagacgcctggaaagagggacagttcaaggacatcatcaccaaggtggccaat
gtggaactgtactacaaagccatccagttttatctggaattcaggcccttgttactgaac
gacctgctcatagttctttctccaagactcgatcactcgcgagccgtcaacttcttcagc
aaggttaagcagcttcctctggtcaagccttacctgcggtcagtacaaaaccacaacaac
aagtcagtcaatgaagcacttaacaacctcttcatctcagaggaggactatcaggccctc
aggacgtccatagacgcgtacgataacttcgacaacatctctctggctcagcgtctggag
aaacacgagttaattgagttcaggagaatcgctgcttacctcttcaaggggaacaaccgc
tggaagcagagcgtggagctgtgcaagaaagacaagctctacaaggatgccatgcaatat
gcatcggagtcaaaggacacagagctggccgaggagctgctgcagtggttcctggatgag
aataagaaggagtgttttgccgcctgcctcttcacctgctacgacctgctccggcctgac
gtggtgctggagacatcctggaggaacaacatcatggacttcgccatgccgtacttcatc
caggtcatgagggaatacctcagcaaggtggacaagctagagacctctgagtccttgagg
aaagaggaggagcaagcgacagaaactcaaccaattgtttatggcacaccccagctcatg
ctgacagcaggccccagtgtgcccgtcccaccacagcaggggtatggctatggttacaca
gcagctcctggttatccccctcaggctcctcaggcccagccgggcttcggttatggcatg
taa
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integrated database retrieval system
