Danio rerio (zebrafish): 323883
Help
Entry
323883 CDS
T01004
Symbol
cul1a
Name
(RefSeq) cullin-1a isoform X1
KO
K03347
cullin 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04110
Cell cycle
dre04114
Oocyte meiosis
dre04120
Ubiquitin mediated proteolysis
dre04141
Protein processing in endoplasmic reticulum
dre04310
Wnt signaling pathway
dre04340
Hedgehog signaling pathway
dre04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
323883 (cul1a)
04120 Ubiquitin mediated proteolysis
323883 (cul1a)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
323883 (cul1a)
04340 Hedgehog signaling pathway
323883 (cul1a)
04350 TGF-beta signaling pathway
323883 (cul1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
323883 (cul1a)
04114 Oocyte meiosis
323883 (cul1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
323883 (cul1a)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
323883 (cul1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
IntS11_C
Motif
Other DBs
NCBI-GeneID:
323883
NCBI-ProteinID:
XP_021334516
ZFIN:
ZDB-GENE-030131-2603
Ensembl:
ENSDARG00000019239
UniProt:
Q6NYS3
LinkDB
All DBs
Position
2:complement(53597419..53640324)
Genome browser
AA seq
777 aa
AA seq
DB search
MSSNRTQTPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSN
QVRGGGPAPSKPSKKTPTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLSVYKEYFETQFLAD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIYNQGLAAIEKCGESA
LNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMVQSSSKSP
ELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS
ASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQV
LSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRY
TLQASTFQMAILLQYNTEDVYTVQQLTDSTQIKIDILVQVLQILLKSKLLVLEDENANVD
EVEFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIM
KMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctaaccggacccagacccctcacggtctgaagcagatcgggctggaccagatc
tgggatgatctgcgtgcggggatacagcaggtgtacacccgccaaagcatggccaagtca
cgctatatggagctctacactcatgtgtataattattgcactagtgtgcatcagtcgaat
caggtccgcggtggaggccccgccccgtccaaaccttcaaagaaaacccctacaccggga
ggagctcagtttgtggggctggaactctacaagagactgaaggaatttctcaagaattac
cttacaaatctgctaaaggatggagaggatctgatggatgagagtgttctgaagttctac
acgcagcagtgggaggattaccggttctccagtaaagtactcaacgggatctgcgcttac
ctcaaccgccactgggtgcgcagggagtgtgacgagggccgcaaaggcatctatgaaatc
tattctctggctttggtgacgtggagagaatgtttgtttcggcctttgaataagcaggtc
acaaatgcagtattgaagctgattgagaaggaaaggaatggagaaaccattaacactagg
ctcatcagtggagtggttcagtcctatgttgagttgggtcttaatgaggatgatgccttt
gctaaagggccgactctgtctgtctacaaggagtactttgagactcagtttctggccgac
accgaacgcttttacaccagggaaagcacagagttcctgcaacagaatcctgttactgag
tacatgaaaaaggctgaggctcgtcttctggaggagcagagaagggtgcaggtttacctc
catgaaagcacacaggatgagctggccagaaagtgtgagcaggtcctcatcgagaaacac
ttggagatcttccacacagagttccagaaccttctggatgcagacaaaaatgaagatctc
gggcggatgtacaatcttgtgtcgcggatcacagatggattaggagaactcaagaagctt
cttgaaacgcacatttataatcaaggcttggcggccatcgagaaatgtggggaatctgct
ctcaatgaccccaaaatgtatgtccagaccattttggatgttcataagaagtataatgcc
ttggtgatgtctgccttcaacaatgatgctgggtttgttgctgctcttgacaaggcttgt
ggacgctttattaataataatgctgttaccaagatggtccagtcctccagcaaatctccc
gaactgctggccagatactgcgactctttgctcaagaagagctccaagaacccagaggag
gcagaacttgaagacactctgaatcaagtgatggtagtgttcaaatacatcgaggataag
gacgtgtttcagaagttttatgcaaagatgttggccaaacgcctggtacatcagaacagc
gcgagtgatgacgccgaggccagcatgatctccaaactaaagcaagcgtgtggctttgaa
tacacatcgaaactccagcgcatgttccaggacatcggagtcagcaaagacctcaatgaa
cagttcaagaagcacctcacaaactctgagcctctagacctggacttcagcattcaggtg
ttgagctcgggttcatggcccttccagcagtcctgcacttttgctctgccatctgagttg
gagaggagctaccaaaggttcacagccttctatgccagcagacacagtggccgcaagctc
acctggctttaccacctgtccaaaggagagctggtcaccaactgcttcaaaaaccgctac
accttacaggcatctacgttccagatggccattctactgcagtacaacacagaagatgtt
tatacagtccagcagctgacggacagcacacagatcaaaatagacatattggtgcaggtt
ttgcaaatattattaaaatccaagttgctggttttagaggatgagaacgcaaacgtggat
gaagtggaattcaaacccgacaccctcataaaactcttcctgggctataaaaataaaaag
ctgcgagtgaacattaatgtgccaatgaagacggagcagaaacaggaacaggaaacgact
cataaaaatattgaggaggacaggaaactcctgattcaggcggccatagtgagaatcatg
aagatgaggaaggttttgaagcatcaacagcttctggcggaggttttgaaccagctctca
tcccggttcaaacccagagtccccgtcatcaagaagtgcattgacatcctcatagagaag
gagtatctggaacgggtggatggagagaaagacacctacagctacttggcctaa
Danio rerio (zebrafish): 406816
Help
Entry
406816 CDS
T01004
Symbol
cul1b
Name
(RefSeq) cullin-1b
KO
K03347
cullin 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04110
Cell cycle
dre04114
Oocyte meiosis
dre04120
Ubiquitin mediated proteolysis
dre04141
Protein processing in endoplasmic reticulum
dre04310
Wnt signaling pathway
dre04340
Hedgehog signaling pathway
dre04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
406816 (cul1b)
04120 Ubiquitin mediated proteolysis
406816 (cul1b)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
406816 (cul1b)
04340 Hedgehog signaling pathway
406816 (cul1b)
04350 TGF-beta signaling pathway
406816 (cul1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
406816 (cul1b)
04114 Oocyte meiosis
406816 (cul1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
406816 (cul1b)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
406816 (cul1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
406816
NCBI-ProteinID:
NP_998660
ZFIN:
ZDB-GENE-040426-2887
Ensembl:
ENSDARG00000007691
UniProt:
Q802D4
LinkDB
All DBs
Position
24:complement(21234596..21270353)
Genome browser
AA seq
774 aa
AA seq
DB search
MSSTRGQNTHGLKQIGLEQIWDDLRSGIQQVYTRQSMARSRYMELYTHVYNYCTSVHQAR
PTGIPSSKPSKKTPTPGGAQFVGLELYKRLKDFLRSYLTNLLKDGEDLMDESVLKFYTQQ
WEDYRFSSKVLDGICAYLNRHWVRRECDEGRKGIYEIYSLALATWRECLFRPLNKQVTNA
VLKLVEKERNGETINTRLVSGVVQSYVELGLNEDDAFVKGPTLSVYKEYFEAQFLADTER
FYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLEI
FHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLESHIHNQGLAAIEKCGDSALND
PKMYVQTTLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTRMAQSSSKSPELL
ARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASD
DAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLSNSEPLDLDFSIQVLSS
GSWPFQQSCTFALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRYTLQ
ASTFQMAILLQFNTENCYSVQQLADSTQIKTDILVQVLQILLKSKLLVLEDENANIDEMD
FKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMR
KVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaccaggggccagaacacccacgggctcaaacagattgggctggagcagatc
tgggatgacctgagatcaggaatacagcaagtctatacacgccagagcatggctaggtct
cgctacatggaactctacacacatgtgtataactactgtaccagtgtacaccaggccagg
cctactggcatcccctcgtccaaaccctccaagaaaacacccacacctgggggggcacag
tttgttggactagaactctacaaaagactcaaagattttctgaggagctacttgacaaac
cttctcaaggatggagaggacctgatggatgagagcgtgctaaagttctacacacagcag
tgggaggactatcgcttctccagtaaagtgttagatgggatctgtgcttacctcaacaga
cactgggtgcgtcgggagtgtgatgagggacggaaaggaatttatgaaatctactcgctt
gctttggtcacttggagagaatgtttattcagacctctaaacaagcaggtaacaaatgca
gttttaaagcttgttgagaaggagagaaatggtgagactattaacaccagactcgtcagt
ggagttgttcagtcctatgttgagttgggcttgaatgaggacgatgcatttgtgaagggc
ccgacattatcagtttacaaggagtacttcgaggcccagtttttagcagacaccgaacgt
ttctatacacgagaaagcacagagttcctccaacaaaaccctgttacagaatacatgaaa
aaggcagaggcacgattgctggaggagcagcggcgggttcaggtttatctccacgagagc
acacaagacgagctggctcgcaagtgtgagcaggtcctcatcgagaaacacctggagatc
ttccacacagagttccagaatcttctagatgctgataagaatgaagatctcggtcggatg
tacaaccttgtttcccgaatcacagatggattgggagagctaaagaaactcttggagtcc
cacattcataatcagggtctggcagccatcgagaagtgtggagattcagcgctcaatgat
cctaaaatgtatgtgcaaactaccttggatgttcacaagaaatacaatgctcttgtcatg
tctgcgttcaataatgatgccgggttcgtggcggcactggataaggcctgtggaagattc
attaataataatgcagtaacaagaatggcacagtcctccagcaaatcccctgagcttctg
gccagatactgtgactccttactgaagaagagttcaaagaacccagaggaggctgaactt
gaagatactctcaaccaagtgatggtggttttcaagtatatcgaggataaagacgtgttc
cagaagttctacgccaagatgctggccaaaagactggtgcaccagaacagtgccagcgac
gacgccgaggccagcatgatctccaaactcaagcaagcgtgtgggttcgagtacacctcc
aaactccagcgcatgttccaggacatcggcgtcagtaaagacttgaacgaacaattcaaa
aagcacctttccaactctgagcctctggacttggatttcagcatccaggttttgagctcc
ggctcgtggccgttccagcagtcttgcacattcgctttaccatctgagttggagcgcagt
taccaaagatttacagctttttatggaagcagacacagcggacgcaagttaacatggctt
taccatctatccaaaggagagctggtcaccaactgcttcaagaacagatacactctgcag
gcctccaccttccagatggccatcctgctgcagttcaacaccgagaactgctactccgtc
cagcagctcgccgacagcacacagatcaaaaccgatattttagttcaggtcttgcaaatc
ctgttgaaatcaaagttgctagtcttggaggacgagaatgcaaacattgacgaaatggat
ttcaagcctgatacattaataaaactgttcttgggctataagaataagaagttacgggtg
aatatcaatgtgccaatgaagacagagcaaaagcaagagcaggaaacaacacacaagaac
atcgaggaggaccgaaagcttctgatacaggcagctattgtgaggatcatgaagatgagg
aaggttttaaaacaccagcagcttttggcagaagtgctgaaccagctttcttcacgattc
aaacctcgtgtacctgtcatcaagaaatgcattgacattttgatagagaaggaatacctg
gaacgtgtagatggggaaaaagacacgtacagttacctggcataa
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integrated database retrieval system
