Danio rerio (zebrafish): 324197
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Entry
324197 CDS
T01004
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
324197
03036 Chromosome and associated proteins [BR:
dre03036
]
324197
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dre03037
]
324197
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
324197
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
324197
UBL E3 ligases
324197
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
324197
Cilium and associated proteins [BR:
dre03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
324197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI_Topors
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
Rad50_zn_hook
PWI
Motif
Other DBs
NCBI-GeneID:
324197
NCBI-ProteinID:
XP_021334958
ZFIN:
ZDB-GENE-030131-6401
Ensembl:
ENSDARG00000037260
UniProt:
A0A8M1P6B6
LinkDB
All DBs
Position
1:27752693..27757523
Genome browser
AA seq
999 aa
AA seq
DB search
MASPQIKERPSGVVLNTISKGASPESKCPICLDHFKNISYLDVCLHKFCFCCIHEWSKNK
AECPLCKQPFNSFYHTIKSEDDYKRFDLRPTENGSFGNMAGQRFRYRTTLTGDRRPVQRR
TSPPPDHGIIFEGLRGSLPQRHNRDLHSMIRRLTVRQRRESEGRSLRSLQDQEVVKFRRA
LYRRGVQVQSVQDGGRTRETSAEFFKRNPACLHRLVPWLRRELTVLYGAHGSLVNIVQHI
IMTLITRHNLDDQAVQHELRPFLLSHTEHFLHEFLSFARSPFNMEAYDQRAVYDLPRPSG
ESSSSENSVIAISEDESESLVSGAQDFATPRVTSSQTAWDDETPGPSYSSERSQVLPVHV
RDSDSDSSVGEAVMPIAAVRHQDHPANPSTIQPEEDHSSSNDEDCVIIGYVKPVAERTPE
LVQLSSDSENSETEQNASPRNSQAPQHIRFISDSDASPTASQRPLRGPASSSRSFEDTSI
QLRKNSKYDNTFSGSREGSSQSKRIHSSSHRKKQPLCKESKNKQRGEKETSRHSSSYWHS
YSYYSHDNSRKAYTETSSSYTSYYRSVNDQFGSRSHGKRRCRDLLDRSRSRSNSRISQSN
RRNRSRSRSNSRISRSNQRNRSHSRSNSGKSQSNRRNRSCSRSYSRTSPFNERNRRHSRS
NSRKSQSNRHNRSCSRSYSRTSPFNERNRRHSRSNSRKSQSNRHNRSCSRSYSRTSPFNQ
RNRRHSRSNSRISQSSRQNRSLSRSNSRKGYSNRRNRNHSRSSSRVSQSSQRNRSHSRSN
FRIKSSSYKSQDEKYQRSLSRSLYSNNDVRSRSRSSSRINTSSRQDRRRSRSSSRMNSSS
SRQTSCHDKYGKKRMYKTKHHEKPSRQSSSKSVGDSDEVGGKKKKKKHTKRRKTRSPSID
DRSEGHSQRHHKRKKKHKKKSKRHNSKERTRKLSPVLITITTDSDGESADPSEPSTSSVC
AIRSTVLIANMATEAFLDNEHQSTAGTENSSVGDAGNYP
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccacagataaaggagcggccatcaggtgttgtgttaaacacaatctcaaaa
ggagcatctccagaatcaaaatgcccaatctgcctggatcactttaaaaacatatcatat
cttgatgtgtgccttcacaagttctgcttctgctgcatccatgaatggtccaagaacaaa
gctgaatgccctttatgcaaacagccatttaattcattctatcacactattaagtctgaa
gatgactacaagaggtttgacctgcgaccaactgaaaatggctcatttggaaacatggca
gggcaaagattcaggtatcgcaccacgcttacaggtgaccgcagaccagtacagaggcga
acgtctcctcctcccgaccatgggatcatatttgagggtctgagaggatctcttccacaa
cggcacaacagagatctacatagcatgatcaggaggctgacagtaaggcagagaagagag
agtgagggtaggtctttgcgaagtcttcaagatcaagaagtggttaagttcagacgagcc
ttgtacagaagaggtgtgcaggtccaaagcgtgcaggatggtgggcgtacgagagagacc
tcagcagagttcttcaaaagaaatcctgcttgcctccacaggcttgtaccttggctgaga
cgagaactgactgttctgtacggtgctcatggttctctggtcaacattgtgcagcacatc
attatgactctgatcactcgacataacttggacgaccaggctgttcaacatgagcttcgg
cccttcttactgtcccacacagagcacttcttacatgagtttctcagctttgctcgatcg
ccgttcaatatggaggcatatgaccaacgtgctgtttatgacttgccaagaccttcagga
gaaagtagcagttcggaaaactctgtgatcgccatctctgaggatgagagcgaatcttta
gtgtcaggagcccaggattttgccactcctagggtgacctcaagccaaacagcatgggat
gatgagactccaggaccatcctactcttcagagcgttctcaggtgttacccgtccacgtg
agggactcagactctgatagtagtgtaggggaagcagtaatgcctattgctgcagtacga
catcaggaccatccagcaaatccttctactattcaaccagaagaggatcattcctctagc
aatgatgaggactgtgttattattggctatgttaagcccgtggcagagaggacaccagaa
ctggtccagctttcttctgattctgaaaattccgagactgagcagaatgcaagtccacga
aactctcaagctccccaacacattcgttttatttcagattcagatgcatcacccactgcc
tcacagagacccttgagggggccagcaagttcttcacgctcatttgaagacacctccata
caacttagaaaaaacagtaaatatgacaatactttttcaggatctagagaaggatcctca
caaagcaaaaggatacactcttcgtctcatagaaagaagcaaccattgtgtaaagagagc
aagaataagcagagaggggaaaaggaaacaagtcgtcactcttcatcctattggcattct
tatagctattacagtcatgacaacagcagaaaagcttatacagaaacaagctcatcttat
acaagctactacagaagtgtaaatgatcagtttggttctcgatcacacggcaaaagaaga
tgtagggaccttctggacagaagtcgctcaaggagtaattcaagaataagccagtcgaat
cggcgtaataggagtcgctcaaggagtaattcaagaataagccggtccaatcaacggaat
agaagtcactcaaggagtaattctggaaaaagccaatccaatcggcgtaatagaagttgt
tcaaggagttattcaagaacaagcccatttaatgaacggaatagaagacactcaaggagt
aattctagaaaaagccaatccaatcggcataatagaagttgttcaaggagttattcaaga
acaagcccatttaatgaacggaatagaagacactcaaggagtaattctagaaaaagccaa
tccaatcggcataatagaagttgttcaaggagttattcaagaacaagcccatttaatcaa
cggaatagaagacactcaaggagtaattctagaataagccagtccagtcggcagaacaga
agtctctcaaggagtaattctagaaaaggctattcaaatcggcggaacagaaatcattct
aggagtagttctagagtaagccagtccagtcagcggaacagaagtcactcaaggagtaat
tttagaatcaagtctagctcctacaaaagtcaagatgaaaaatatcaaagaagcctttct
agatccctttactccaataatgatgtcagaagtcgctcaagaagcagttccagaataaac
acctctagccgccaggaccgaagacgctcaaggagcagttctagaatgaattccagctcc
tcacgccagacatcatgccacgataaatatggtaaaaaaaggatgtacaaaacaaagcat
catgagaaaccctcaaggcagagttctagtaaatcggttggcgattctgatgaagtaggt
ggaaaaaagaaaaaaaagaagcatactaaaaggaggaaaactagaagtccaagcatagat
gacagatctgagggccacagtcagagacatcacaagaggaagaagaaacacaagaagaag
agcaagagacataacagtaaggagaggacgagaaagctcagccctgttctcattacaatt
actactgacagtgatggtgaaagtgctgaccccagtgaaccctcaaccagcagtgtttgt
gccattagatctactgtcttaatagcaaacatggctacagaagctttcctagacaatgag
catcagtcaacagctggaactgaaaatagttctgtgggtgatgcaggaaattacccctag
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