KEGG   Danio rerio (zebrafish): 324525
Entry
324525            CDS       T01004                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein
  KO
K23625  ataxin 2/2L
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    324525 (atxn2l)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     324525 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 324525
NCBI-ProteinID: NP_997849
ZFIN: ZDB-GENE-030131-3246
Ensembl: ENSDARG00000011597
UniProt: Q6PFI6
LinkDB
Position
3:15394401..15425689
AA seq 981 aa
MASSVPGSNSNRPNPGRNRNSVKTPSQSPPVFEGVYNNSRMLHFLTAVVGSRCDVMVKNG
SLYEGIFKTLSSRCELAVDAVHKVKNEEGDGGGGGGTAVYPRKEEITDTMIFGPSDLVTM
ICRDVDLNYATRDTFTDSAIGSSRLNGDHREKVLQRWDGGDSNGENFDLDADTANGWDAS
EMFRFNEETYGVKSTYDSSLSMYTVPLERGSSEGFRQREARAARLANEIEASSQYRHRVA
LENDEGRTDEDKFSAVVRDREREAAERERGRDSPGFSSAGSREGKYIPPQRAREREMGVS
GRGERGGAVSTLPNRTNRPGPSSSSPRPLPSANSQALPPTDRNSSLSVRGGFSTHQSQSS
TPTQSRPSEPGHSSPPSPHTLSHSLSHPQSLSDVARPVNGVSPKSQRTGQTNRNMRTSNS
HSSPTVSRSPKPDAPPQDPLLTGSYLDPSSKPVGPTPLFPVDVNEILSKERMESPVSPQE
GKSNKIPSIQQRSQISEELRKFGNTFRLQQNPKTLPTESTQANPAHNTQTDPAAPTEAKP
APPTTPNTELSAEERSRETNPEGPVTSTPPPATSISAPSGIGMQNPPAEGQTAGAPQPAR
TPGSEDGKPEAPERSEGMTDQVKKSTLNPNAKEFNPTKAPLSMVKPSATPTPPRPTPPSP
TVVLQTQPGQGAVYNPQYLSYVSQVPTQIQGHSVQPQIPYSYMTAVSQGKYPRTKGSVVT
PRPDHSSSAPPMIQAASAAGPPLVASPYPPSYLQYNQVIPAMPHYPGHQVYSMLQGGPRM
LGSGGHPQALGPPGPQYPGQTEGPSAPQQGMYAPQSFSHHSGSIHPQPSSTPTGSQPPPQ
HPAPSPGQSGQSGPQPQSLYHSGPLSAPTPPNLPPGHSSPQASYSLQGYSLPGHQPLPHP
YSSLGQLTQAHVPGALSGPHHTGGHGPPPVMLLHAAPQQGSGPQHGPPPQQGAHQHFTYL
GPQVPVQAHNPQRIPYHPSGN
NT seq 2946 nt   +upstreamnt  +downstreamnt
atggcttcatccgttccggggagcaactctaacagacccaacccggggagaaacagaaac
tccgtgaagactccttcacagtcaccacctgtgtttgaaggtgtgtacaacaactcccgg
atgctccattttctcacagccgtcgtgggctccagatgcgatgttatggtgaagaacggc
agcttgtatgagggaatctttaagacgttaagctcacgttgtgagctggcagtggatgct
gtgcacaaggtgaagaatgaggaaggagatggaggcggtggaggcggcacagctgtctat
cccaggaaagaagagatcacagacaccatgatctttggccctagtgaccttgtcactatg
atctgcagagacgtagacctcaactacgctacccgagacactttcacagactctgcaatt
ggctcatcaagattaaacggtgaccacagagagaaggtcctccagaggtgggatggaggt
gacagcaatggagagaactttgacttagacgcagacacagctaatggttgggatgccagt
gagatgttccgctttaatgaggagacctatggggtgaagtccacctatgactccagtctc
tccatgtacacggttcctctggagcggggaagctctgagggcttcaggcagcgagaagct
cgagccgcccgattggccaatgagatcgaggctagttcacagtatcgccacagagtggcg
ctggagaatgatgagggaagaactgatgaagacaaattcagtgcagtggttcgagaccgg
gagcgtgaagcagcagaaagagaaaggggaagagatagccctgggttctccagtgctggg
agcagggagggcaaatacattcctccccagagagcaagggagcgagagatgggagtttct
ggcaggggtgaaagaggtggggctgtgtccaccctgcctaatcgaacaaatcgacccgga
ccatcaagctcctcccctagacccctcccctctgctaacagccaggcccttcctcccact
gataggaacagctctctgtcagtcagaggaggattctctacacaccaatcacagagcagc
acgccaacacagtcccggccctcagagccgggtcactccagccctccttccccccacaca
ctctcacattcactctcacaccctcagtccctctcagatgtggcccggcctgtcaatgga
gtttcacccaagtctcaaaggactggacagactaacagaaacatgcgtacctcaaactcc
cactcctcccctacagtctctcgctcccctaagccagatgctcctcctcaggaccctctt
ctgactggatcttatttggacccctcatccaaacctgttggccccactcctctgttccct
gtagatgtaaatgagatcctgtccaaggaaaggatggagagtccagttagtccacaggag
ggcaagagcaacaaaataccttcgatccagcagagatcacaaatctctgaggagcttcgc
aagtttggtaatacttttaggcttcagcaaaaccccaaaactttgcccactgaatctact
caagcaaaccctgcccacaacacacagactgaccccgccgctcccacagaagcaaaaccc
gccccgcccacaaccccgaacacagagctttcagcagaggagcgaagtagagagactaat
ccagaagggccggtgacctccacccctccaccggccacatccatctctgcaccgtctggg
attggcatgcaaaatccacctgcagaagggcagacggcgggggcgccccaacctgcaagg
accccaggcagtgaggatggcaaaccagaggcccctgagagatctgagggcatgaccgat
caggtgaagaaatccacactcaatcccaacgccaaagaattcaaccccaccaaggctcct
cttagcatggtgaagccctcggcgactcccacaccaccacgaccaaccccacccagtcct
acagtcgtgctgcagacccaaccaggccagggagccgtttataacccccagtacctgagc
tacgtctcccaggtacccacccagattcaaggccactctgtgcagcctcagatcccatat
tcgtatatgaccgctgttagtcaagggaagtacccaagaacaaaaggttctgtggtaact
cctcgtccagaccacagctcttcagcgccccctatgatccaggctgcatcagcagcagga
cctcctctagtggcgtctccttaccctccctcttatctgcagtacaaccaggtcatccca
gcaatgccccactaccctggacaccaagtatactcaatgctccagggtggaccacggatg
cttggatctggaggacacccacaggctctgggacctccaggcccccagtacccaggtcag
actgaagggccatcagctcctcaacaggggatgtatgctccgcagtcattctctcatcac
tcgggctccattcatcctcagccctccagcacccctacaggcagccagccgccccctcaa
caccccgctcccagcccgggacagtctggtcagtctggtcctcagcctcagtctttgtat
cactctgggccgctgtcagccccgacccctcctaaccttcctccaggacacagctctcca
caggcctcttactcccttcagggctacagtctgccgggacaccagccactgccgcatcct
tactcctctctgggacagctcacacaggctcatgttcccggtgctctgtcgggtccacat
cacacaggaggccacggtcctccgccagtgatgctgcttcatgctgcccctcagcagggt
tctggccctcaacacggcccgccaccacagcagggggcccaccagcacttcacctaccta
ggacctcaggtgccagtgcaggctcacaatccccagcggattccatatcacccttctgga
aactga

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