Danio rerio (zebrafish): 324724
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Entry
324724 CDS
T01004
Symbol
dicer1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
324724 (dicer1)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
324724 (dicer1)
microRNA pathway
RISC loading complex
324724 (dicer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
DEAD
ResIII
Helicase_C
Cas3-like_C_2
DSRM_2
SLFN-g3_helicase
dsrm
Motif
Other DBs
NCBI-GeneID:
324724
NCBI-ProteinID:
NP_001154925
ZFIN:
ZDB-GENE-030131-3445
Ensembl:
ENSDARG00000001129
UniProt:
Q6TV19
A0A8M9PNL3
LinkDB
All DBs
Position
17:complement(19419989..19476166)
Genome browser
AA seq
1865 aa
AA seq
DB search
MAGLQLVTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAVLLIKELSHQIRGENGKRTVFLVNAASSVAQQASTVRTHSDLQVGDYMSEDMTSWP
EEMWNREMIENQVLVMTCHIFLHVLKNGVLPLSKINLLVFDECHLAITGHPYREIMKICE
GCPSCPRILGLTASILNGKCDPCDLEEKIQNLEKILQSNAETATDLVVLDRYASQPREEV
LDCGQYQDQSGLSERLLNELDEALNFLNDCNLSVHREDRDPTFISKQVLNDCRAVLTVLG
PWCADKAAGIMVRELQKYIKHEQEELNRKFLLFTDTILRKIHALCEEHFSPASLDLKFVT
PKVIRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEAEAKEKTEANF
PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPRNKQM
EVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR
APVSNYIMLADSERTKTFQEDLKTYKAIEKILRNKCSKSAECNDFELEPVTDDDNVLPPY
VLRSEDGGPRVTMNTAIGHVNRYCARLPSDPFTHLAPKCKTVEMNTGGYRSTLFLPINSP
LRVPVTGPVMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEET
SVPGRPGSTKRRQCSPKAIPECLRGCYPVPEQPCYLYVIGMVLTTPLPDELNFRRRKLYP
PEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFSLSAEQLELITRLHQYIF
SHILRLEKPALEFKPVEADSAYCVLPLNIVEDSNTLDLDFKFMEDIEKSEARIGIPNTQY
TKQNPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKT
KYNLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV
PELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGVGAQTLPPDFRYPNL
DFGWKKSIDSKSFISCPSACMEEDDDHCKLGTSSDSNHTAPESCSMEVSQPPEGAPNTPD
EKLETLTLPVTDLNKDCFPNLPNGTQADSDDLPHRSDVCQCSQLGPLERDLSTQTTTSVS
VRPSPAGEPQPWPSDECTGRSSDLCDPHVKKPTSKHCPKSETATSTPAPSETSSEDCRSA
CAGPAWDSPKTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDA
HEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSSTDKWD
SDENKDLANGKASDDEDEDDDDEPEEAEVEPSKEDVNVEDDLEYYYEHIRFIDSMLIGSG
AFGKKISLQPTDPGYEWKAPKKAHNSHFSPDGGADEFDYSSWDAMCYLDPSKAGEEDDFV
VGFWNPSEENCGTDIGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC
SLGLKVLPPEKQSSGGSAELQYGWLKIPPRCMFEHPDAERTLNHLISGFLNFESKINYTF
KNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRS
ALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEE
KEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVREL
LEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQP
QVQNN
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctacagctggtgacccctgcctcctcacccatggggcccttctttggtctc
ccgtggcaacaggaagctatccatgacaacatatacacaccaaggaaatatcaggttgaa
cttcttgaagcagctcttgaacataatactatagtctgcttaaatactggctcagggaag
acctttatcgcagtgctcctaatcaaagaactctcccaccaaattcgtggcgagaatggg
aagaggacagttttcctggtgaatgcagcgtcatctgtggctcagcaagcatctactgta
agaacacactctgatctccaagtaggcgactatatgtcagaggacatgacatcatggccc
gaggagatgtggaacagagagatgatagagaatcaggtgctggtgatgacgtgccacatc
ttcctgcatgttttaaagaatggagtcttgccactatcaaagatcaacctgctggttttt
gacgaatgccaccttgcaatcactggccatccttatcgggaaataatgaagatttgtgaa
ggttgccccagctgtcctcgcattttgggtctcactgcttccattttaaatggcaaatgt
gacccttgtgatttggaggagaaaattcagaacctggagaagattcttcagagcaatgca
gaaactgccactgatcttgtggtgctggataggtatgcgtcgcagccgcgtgaggaggtg
ctggattgtggacagtaccaagatcagagtgggctctcggagaggcttttaaatgagctg
gacgaagccctcaattttctaaacgattgcaacttgtctgtacatagagaagatagagac
cccacgtttatctccaaacaggtgctgaatgactgtcgtgctgtgttgactgtgctgggc
ccttggtgtgcggataaagctgcaggaatcatggttcgggagctgcagaaatatattaaa
catgaacaggaagagctaaaccgcaagttcctgttgttcaccgacaccatcctgaggaaa
atccatgccttatgtgaggagcatttttccccagcttccctcgacctgaagtttgtcact
cccaaggtcatcagacttttggagattctccacgagtacaagcctttcgaacggcagcag
tttgagagtgtggagtggtacaacaatcgcaatcaggacaattatgtttcttggagtgat
tctgaagatgatgatgaggacgaagaggcggaggcaaaggagaaaaccgaagcaaatttt
ccctcgccgttcacaaatatcctctgtggaatcatctttgtggaaaggcgatatacagcg
gttgttttaaacagacttattaaggaggcaggaaagcaagacccagagctggcttacatc
agtagcaacttcatcacagggcacagcatcggcaagaaccagcctcgcaacaagcagatg
gaggtggagttcagaaaacaagaggaagtcttgaggaaattcagagcccatgaaaccaac
ttgctcattgcaaccagcattgtggaggaaggcgtcgatatcccaaagtgcaatttggtc
gttcggtttgacctgccgacagagtaccggtcgtacgtgcaatccaaaggtcgagcccgt
gctccagtctccaactacatcatgctagcagacagcgaacggactaaaaccttccaagaa
gacctcaagacctacaaggccatagagaagatcctccgaaataagtgctcgaagtcggct
gaatgcaatgattttgagctggagcctgtgaccgatgacgacaatgttctcccaccgtac
gtcctgcgctcagaggacggcgggcctcgtgtcaccatgaacactgccattgggcacgtc
aaccgatattgtgcgcgcttgcccagtgatccgttcactcatctcgctccgaagtgtaaa
actgtagagatgaacaccggagggtatcgatccacactcttcctacctatcaactcacca
ctcagagttcctgtcaccgggccagtaatgaattgtgcaagactggctgagaaagctgtc
gctcttctctgttgtgaaaaactccacaaaattggtgaactggatgatcatctgatgcct
gtgggaaaggaaactgtgaagtatgaggaggagctggacctgcatgatgaagaggagaca
agcgtgccaggaagaccaggctccactaaacggagacagtgctccccaaaagccatacca
gagtgtctgcggggttgttaccctgtgccagagcagccttgctacctttacgttattggg
atggtcctcaccacccctctacctgacgaactcaacttccggcggaggaagctgtatcca
ccagaggacacaacccgatgttttggcattctgacagctaaaccaataccccggatccct
catttccctgtgtacactcgttctggtgaggtgaccatctccattgagctgcagaagtcg
ggctttagtctaagtgcggagcagctggagctgatcacacgtctgcatcagtacatcttc
tcccacatcctccgtctggaaaagccagcactagagtttaagcctgtagaggcagattct
gcctactgtgttctacctctcaacatcgttgaggattccaatactttggatctggatttc
aagttcatggaggatattgaaaagtctgaagcacgcattggcattccaaacactcagtac
accaagcaaaacccattcatcttcaaattggaggactaccaggatgctgtcatcattcca
aggtatcgtaattttgaccagccgcatcggttctacgtggctgacgtttacacagacctc
accccgctcagtaaattcccctctccagagtacgagacttttgccgaatactataaaacc
aagtacaacctggacctgtcaaatgttaatcagcccctactggatgtggaccacacatct
tcaagattgaatcttttaactccccggcaccttaatcaaaaggggaaagcccttcctctc
agcagtgcggagaagagaaaggccaagtgggaaagcctacaaaacaaacagattttagtt
ccggagctctgtgccattcaccccatcccagcctctttgtggaggaaagccgtctgcctt
cccagcattctctatagacttcactgccttctgacggccgaagagctgcggtctcagaca
gccatcgatgctggcgtaggggctcagaccttgcctcctgatttcaggtatcctaatttg
gatttcggatggaagaaatccatcgacagcaagtctttcatctcctgccccagtgcatgt
atggaagaagacgacgatcactgtaaactcggcacaagctccgattcaaaccacactgcc
cccgagagctgcagtatggaggtctcccagcctccagaaggcgctcccaacacaccagat
gaaaagctagaaaccctcactctccctgtgactgatctaaacaaagactgtttcccaaac
ctcccaaacggcactcaggccgacagcgacgacctccctcacagaagtgacgtttgccaa
tgctctcagctgggccctctggagagagacctatcaacacaaaccactacctcagtttca
gtgcggccctctccagctggagaaccacagccatggcccagcgatgaatgtacaggcagg
agctcggatctctgcgacccacatgtgaagaaacctacctcaaagcattgccctaaatcg
gagacggcgactagcaccccagcaccttcagaaacgtcatcagaggactgtagatcagcc
tgcgctggtccagcctgggattcgcccaaaaccctgggcccgaaccccgggctcatcctg
caggccctgactctctccaacgccagtgacggcttcaatctggaacgcctggagatgctg
ggcgactccttcctgaaacacgccatcaccacatacctgttctgcacttaccctgacgcc
cacgagggcagactgtcctacatgagaagcaagaaggtcagcaactgtaacctgtatcgg
ctggggaagaagaagggtcttccgagtcgaatggtggtgtccatctttgacccgccggta
aactggcttcctccaggctacgtcgtgaatcaggacaaaagcagcacagacaagtgggac
tcagatgagaataaagatttagcgaatggaaaagccagcgatgacgaagacgaggatgac
gatgatgagccggaagaagcagaggtcgagccatctaaagaagatgtaaatgttgaagac
gacctggagtattattacgaacacatccgcttcatcgacagcatgttaatcggctctggc
gctttcggcaagaagatctccctccagcccacagaccccggctacgaatggaaagctcct
aaaaaagcccacaactcccacttctcgccagacgggggtgctgacgagttcgattacagc
tcctgggacgccatgtgttacctggaccccagtaaagcaggtgaggaggacgatttcgtg
gtgggcttctggaatccctctgaggaaaactgcggcacggacatcgggaaacagtccatc
tcttatgaccttcacacggagcagtgcatcgcagataagagcatagcggactgtgtggag
gctctgctgggctgctatctgaccagctgtggtgagcgagcggctcagctgtttctctgc
tctctgggcctgaaggtgctaccaccggagaagcagagttcgggaggctctgccgagctc
cagtacggctggctgaagatcccaccacgctgcatgttcgaacatcctgacgctgaacgc
acgctcaaccacctcatctctggcttcctgaacttcgagagcaagatcaactacacgttt
aagaacaaggcgtacctgctgcaggccttcacacacgcctcgtatcattacaacaccatt
acagattgttatcagcggttggagtttcttggtgatgcaattctagactacctcataacc
aagcacctttatgaagacccccggcagcactcgcccggcgtgctgaccgacctgcgctct
gcacttgtcaacaacaccatattcgcttccctggctgtcaagtatgattaccacaagtac
ttcaaagctgtctcgccagaactcttccacgtgatcgacgattttgtgcaatttcaactg
gagaagaatgaaatgcaaggaatggattcagagcttcgccgatcggaggaagatgaagag
aaagaggaagacattgaagtccccaaagcaatgggagacatctttgaatcgctagctggt
gcaatttacatggatagcgggatgtcacttgagacagtttggcaagtgtattatccaatg
atgaggccgctcatagaaaaattctccgctaatgtccctcgatccccagtgcgtgaactc
ctggagatggagccagagacagctaagttcagccctgcggaaagaacttatgatggaaag
gtacgggtgacggtggaagtcgtgggcaaaggcaagttcaaaggcgtaggacgcagctac
cggatagccaagtcagcagccgcccgccgagccctgcgcagtctcaaagccaaccaacct
caggtccaaaacaactga
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integrated database retrieval system
