Danio rerio (zebrafish): 325248
Help
Entry
325248 CDS
T01004
Symbol
ddx31
Name
(RefSeq) ATP-dependent DNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dre01009
]
325248 (ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dre03009
]
325248 (ddx31)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
325248 (ddx31)
Protein phosphatases and associated proteins [BR:
dre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
325248 (ddx31)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
Pre-60S particles
Helicases
325248 (ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
325248
NCBI-ProteinID:
XP_021332164
ZFIN:
ZDB-GENE-030131-3973
Ensembl:
ENSDARG00000035507
UniProt:
A2BFD2
LinkDB
All DBs
Position
5:30340214..30369405
Genome browser
AA seq
739 aa
AA seq
DB search
MAEDTLMLNISSGSVQFNRKTNQKHLSSSEKWAQKKRVAKRKAAVEPQESSASKQRKINQ
TGQQHAQKQTLQTPRSPSQRSNNRDTEENPVQRENSEAKSPSKVKTFPKKAPTEHEDHGR
PFIKTSSLFRNNPEIPDVLSPAVNQVKEKVFTSNTFEELNLHPHLVATLHKVLNVSSMTS
VQKQTIPVLMSGKDAVVRSQTGSGKTLAYGIPMVQFLQAIQPKVKRSDGPLAVVIVPTRE
LALQSFQMFQKLLRPFTWIVPGVLMGGEKKKAEKARLRKGINVLISTPGRLVDHIKNTLS
IAFSAVRWLILDEADRILDLGFEKDLTVILNALNTAGPDRQNVLLSATITEGLSRLASIS
MKDPVSVHVSEGSEETVEACPQAAPQALSDSYAVPERLQQHVVVVPSKLHLVCLAAFILA
KCKFEQRQKLVIFISSCEAVEFLLNLFTAVLCEIPSNTSSKSTSCLNFYRLHGNMRQEER
TEVFQEFSQCKTGILLCTDVAARGLDLPQVTWIVQYNPPVSAAEYVHRVGRTARIGAQGS
SLLFLTPSETAFVDVLANHNISLSEMKMVDILSTLMKDERFKGRGKWDSKRSADAFEQEV
RERATLLQTDFENYVHASNESLQTAKSALQCFLRAYTTYPSSLKHIFHIRMLHLGHAAKS
FGLRDAPQGLASSISTNPANSKHSKKAKDKAKSPPKKLTAKQRVSNLMRSEYDSGMDGQS
KAKKKRKNKKGQAEESTDA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggacacgctgatgctcaacatctcctcaggttctgtacagtttaacagaaaa
acaaaccagaagcatttgtcatcatcagagaaatgggcacagaaaaagagagtggcaaaa
aggaaggctgccgttgagccccaagagagcagcgcctctaaacagaggaagattaatcaa
actggtcaacagcacgcacaaaagcaaacgctgcaaacccctagaagcccctctcagagg
agcaataacagagacacagaggagaacccggtccagagagaaaactcagaagcaaagtcc
ccatcaaaggtgaaaacatttccaaagaaagctcccacagagcatgaagaccatggcaga
ccatttatcaagacatcgtctctcttcagaaacaacccagagatccctgatgtcctcagt
cctgctgtaaatcaagtgaaggagaaagtcttcaccagcaacacgtttgaagagctaaat
ctgcatccacatctggtggccacgctccataaggtgttgaacgttagcagtatgacgagt
gtccagaaacagaccataccagtgctgatgtctggtaaagatgctgtagtgcgctcccag
actggatcagggaaaacattggcatatgggattccaatggttcagtttttacaagcgatt
caaccgaaagtcaagagatcggatgggcctttagctgttgtgattgttccaaccagagag
cttgccttgcagagctttcagatgtttcagaagcttcttagacctttcacctggattgtt
ccaggagttttaatgggaggagagaaaaagaaagcagaaaaagccagactgcggaagggc
ataaatgttctgatctcgactccaggccgactggtggaccacatcaagaacacactaagt
attgctttcagtgctgtgcgctggctcattctggatgaagctgacaggattttggatttg
ggctttgagaaagatctgactgtgattctgaatgcactgaacaccgctggacccgacagg
caaaatgtgctgctttcagctactataactgaaggactgtcccgattagccagtatcagt
atgaaggatcctgtgagtgtccatgtgtcagaggggagtgaggagacagttgaagcgtgt
ccccaggcggcccctcaggctctgtcagacagctacgcagtgcctgagagactgcagcag
cacgtggtggtggtgcccagcaagctccacctggtctgtttggctgcctttattctggcc
aaatgcaagtttgagcagcgtcagaagttggtcatcttcatatccagctgtgaagctgta
gagtttctgctcaatctctttactgcagtcctctgtgaaattcccagcaacacctcatct
aaaagtacctcatgcctcaacttctacagactgcatggcaacatgagacaggaggagcgc
accgaagtcttccaagagttctctcagtgtaaaactggcattctgctgtgtacggatgta
gctgcacgtggtttggatttgcctcaggttacttggattgttcagtacaatcctccagtt
tctgcagcggaatatgttcatcgtgtgggccgcacggctcgaatcggagctcagggcagc
agcctgctcttcctcaccccctccgagaccgcttttgtggatgtgctggccaatcacaac
atcagtttgtctgagatgaagatggtggacatcctgtccacactaatgaaagacgagcgc
ttcaaaggcagagggaaatgggacagcaagagatcagcggatgcttttgagcaggaggtg
cgagagagagccaccttgttacagactgactttgagaattatgttcatgccagtaacgag
tctctgcaaactgcgaagagcgcactgcagtgtttcttgagagcttataccacataccca
tccagtctaaagcacatcttccacatccgcatgctgcacctgggccacgctgctaagagc
tttggcctgagggacgcaccccagggcctggccagctccataagcactaatcctgccaac
agcaaacactccaagaaggccaaagacaaagccaagagccctcccaagaaactcacagca
aagcagcgggtgtcaaacctcatgcgttcagagtatgacagtggcatggatggacaatct
aaggctaagaagaaaaggaaaaataagaagggtcaagcagaggaatctaccgatgcataa
DBGET
integrated database retrieval system
