Danio rerio (zebrafish): 325603
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Entry
325603 CDS
T01004
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
325603 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
325603 (polr1b)
Enzymes [BR:
dre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
325603 (polr1b)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
325603 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
325603
NCBI-ProteinID:
NP_956812
ZFIN:
ZDB-GENE-040426-1598
Ensembl:
ENSDARG00000077469
UniProt:
Q4V967
LinkDB
All DBs
Position
13:41917625..41940467
Genome browser
AA seq
1132 aa
AA seq
DB search
MDLSKWCNLKTEPSLKHLTEAGFGVPKEKQRVPVQELVKAHIESFDQAVTDGLCRVVEAI
PPMEFLYKGDRISLSFVEAIIHTPSVSKGGISRDLRVFPAECRGRRCTYRAKLVADVSWS
VNGVPKGIIKQSLGQMPIMVKSKLCNLHGLSPKELLEHHEEAEEMGGYFIVNGIEKVIRL
LIMPRRNYPIAVSRPKFKSRGQGYTQYAISMRCVKEEHTAINMNLHYLDNGTVMVNFIYR
KELFFLPLGFALKALVDYSDYQIYQELIKGREDNSFYKSCVSEMLRIVMDQGCTTKIKVL
NYLGERFRVKLNLPEWFTHEQCAHFLLDECLCIHLKTDVEKFYMLCLMTRKLFSFAKQEC
MEENPDSPMFHEVLTPGQLYLMFLKEKMEGWLVSVKLALEKKPQRVGGLTPDSMTKLFNM
GTDLTKAFEYLLATGNLMSKTGLGMLQNSGLCVVADKLNFIRYLSHFRCVHRGAAFAKMR
TTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAHCEIVAPVYPTSTLPGLLCSLGVNAA
DGNPGQAYSDCYPVILDGAMIGWVEKEVAPSVIESLRRFKVLGEKKVPPWTEIVLVPQTG
KASLYPGLYLFTTPCRMVRTVRNLSLGKQELIGIFEQVYLNVGIFEKEIEDGVTTHQELF
PHSMLSVVAEFIPFSDHNQSPRNMYQCQMSKQTMGFPLHSYQYRSDNKLYRLQTPQSPLV
RPAMYDHYDVDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTEIIDLS
EKVKGDDSIVFGVKPGDPKVMGKLDADGLPFIGSVLKYGDPFYGYISLNTGQSHVYFYKY
QESCVVDNIKVCSNETGTGRFKRICVTSRVPRNPTIGDKFASRHGQKGILSRLWPAEDMP
FTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSASLHGLCHDATPFTFSEENSALEHFG
ELLKAAGYNYYGTERLYSGLSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTN
QPMGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAQVCMDCGSLLSTLLEK
PPPNWSATRHRKTICLLCNKSDSIETVSVPYVFKYFVAELAAMNIKIKLDVK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatctctccaagtggtgcaatctaaagaccgaaccgagcttaaagcacctgacagag
gcaggattcggtgtcccgaaagagaaacagcgcgtgccggtgcaggagctggtgaaggcg
cacattgagtccttcgatcaggcggttactgatggattatgtcgggttgtggaggctatt
cctcctatggagttcctgtacaagggcgacaggatcagtctgtcgtttgtggaggccatc
attcacactccatcagtgtctaaaggaggaatcagcagagacctgcgggtcttccctgcc
gagtgcagaggcaggcgctgcacatacagagccaagctggtggcagatgtgagttggtcg
gtcaatggcgttcctaaaggaatcatcaaacagtctctgggtcagatgccgatcatggtc
aaatcaaagctctgcaaccttcacggcctctcacccaaagagctcctcgagcaccatgaa
gaagcagaggaaatgggtggctattttattgtgaacggcatagagaaggtgattcgtctt
ctgatcatgccgagaagaaattatcccatcgctgtatccagaccgaagttcaagagcaga
ggacagggttacactcagtacgctatttcaatgcgatgtgtgaaggaagaacacacagct
attaatatgaatcttcactatctggacaatggaacggtgatggtgaacttcatctaccgg
aaagagctgttctttcttcctttgggctttgcactaaaggctctagtggattattccgat
taccagatctaccaagagctgattaaaggtcgagaggacaactcattctataaaagctgt
gtctctgaaatgctgcgtatagtcatggaccagggctgcaccactaaaatcaaagtgctg
aattacctgggcgagcgtttccgggtcaaactcaacctcccagaatggttcactcacgag
cagtgcgctcacttcttgctagatgaatgtctgtgtattcacctgaagacagatgtggag
aagttctacatgttgtgtttgatgacacggaagctttttagctttgccaagcaggagtgt
atggaggagaatcctgacagtccgatgtttcatgaagttctcaccccaggccagctttac
ctcatgttcctgaaggagaaaatggaaggctggttggtgtccgtgaaactggcattggaa
aaaaaacctcaaagagtcggaggactgactccagactctatgaccaaactctttaacatg
ggtacagatctcaccaaagcctttgagtatctgttagccacaggaaacctcatgtccaag
actggtttgggcatgttgcagaacagtggtctgtgtgtcgtggcagacaagctgaacttc
atccgctatctgtctcacttccgctgcgtgcacagaggagccgccttcgccaaaatgagg
accacaactgtgcgaaagctgctgccggagtcctggggtttcctctgtccggttcacact
cctgatggagaaccgtgcggacttatgaaccacatgacagctcactgtgagattgtggcc
ccagtgtatcccacaagcaccctgccaggccttctctgctcactaggtgtgaatgcagcc
gatggtaacccaggccaggcatattcagactgttatcctgtcatactggatggggccatg
attgggtgggtggaaaaagaagtggcgccatcagtcattgaatctctccgtagattcaag
gtgcttggagagaaaaaagtgccaccctggactgagatcgttctggttcctcagacgggt
aaagccagcttgtacccaggcctctatctgtttaccacaccctgtcgcatggttcggaca
gtccgaaacctcagtctgggtaaacaggagttgattggcatatttgaacaggtgtacctg
aatgtgggcatctttgagaaggagatagaggacggagtgaccacccatcaagagctcttc
cctcacagtatgttgagtgtcgttgcagaattcatccctttctcagatcacaaccagagt
cccagaaacatgtaccagtgccagatgagtaaacagacgatgggattcccactgcactcg
taccagtaccgatctgacaataaactgtaccgtctacagacacctcaaagtcctctggtc
agacctgcaatgtatgaccattatgatgtcgacaattaccctattggtaccaacgcaata
gtggcggtcatttcttacactggctatgatatggaagatgctatgatcgtcaacaagtct
tcatgggagcgtggctttgctcatggttctgtttacaagactgaaatcatagacctttcg
gagaaggtcaagggcgacgacagcattgtgtttggggtgaagccgggcgaccctaaagtt
atgggcaagcttgatgcagatggactgccgtttatcggctccgtgttaaagtacggagac
cctttctatggctacatcagtctcaacaccggccagagccatgtgtatttctacaagtac
caagaaagctgtgtggtggacaatatcaaggtatgcagtaatgagactggaactggacgc
ttcaagcgcatttgcgtcacatcccgcgttcccagaaaccccaccatcggagacaaattc
gccagcagacatggacagaagggaatcctgagccgtctgtggcctgcagaggacatgccg
ttcaccgaaagcggtatgagcccagacatcctattcaaccctcacggcttcccctctaga
atgaccatcgggatgctcatcgagagcatggcaggaaaatccgcttcccttcacggtttg
tgccatgatgccacaccattcacattctctgaggaaaattcagcactcgagcactttggg
gagttgctgaaagccgccggatacaattattacggtacagagcgcctgtactccggcctc
agtggcttggagctcgaagcggacatcttcatcggggttgtttactaccagcgcttgcgt
cacatggtctccgacaagtttcaagtgagaactacaggagcgagagataaagtaaccaat
cagccaatgggaggcaggaacgttcagggaggaatccgctttggggaaatggagcgggac
gctctgctggctcacgggacgtcgtttctgcttcacgaccggttgtttaactgctcggat
cgctccgtggcgcaagtttgcatggactgtggtagcctattgtcgacacttctggaaaag
ccgccgcctaattggtctgctacacgtcatcggaaaaccatctgcctgctttgcaataag
tctgactctatcgagaccgtctctgtgccttatgtgttcaaatatttcgtagccgagctt
gcagcaatgaacattaaaattaaattggacgtcaagtaa
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