Danio rerio (zebrafish): 325832
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Entry
325832 CDS
T01004
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
325832 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
325832 (gtf2f1)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
325832 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
325832
NCBI-ProteinID:
NP_001410558
ZFIN:
ZDB-GENE-030131-4557
Ensembl:
ENSDARG00000032129
UniProt:
A0AB13AB08
LinkDB
All DBs
Position
3:complement(33921971..33945791)
Genome browser
AA seq
536 aa
AA seq
DB search
MTSLGSQGSSSSSSTEYVVRVPKNTNKKYSIMAFNAGDKVSCSTWTQARMERDMSNRRIY
GEEETQEGAAGSEFGKKQREEARRKKYGIITKEFKVEDQPWILKVNGKAGRRFKGIKKGG
VTENASYYIFTQSADGAFEAFPVHAWYNFTPQAKHRTLTAEEAEEEWGRRNKVVNHFSIM
LQRRLREQERGGGDEDEEEGEKGTKKKKKGGRGGDLRIHDLEEDLEMSSDESDGSNGDDD
EAKAKAKKEKGAKGKGKKKKKKGSDLEGFEDSDDGDFEGLEVDYMSDESSSEEEEPEKTK
PNKGEDVPKGIDEMSESEEESEEETKNEEENKEEEEEEDGKKTPVQVEKKKKKDSSGESD
SSEDSDIEGEAASALFMKKRTPPKRGGGRGSAGSSRTGSRPGTPSIDNAATSNTLRAAAS
KLEQGKRQTTVPSSETPAAKRLKMEPSPQSSSGKSTPQPASGKSTPSASDVLLTEDAVRR
YLIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNINDKMHFYLTE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactgggttcacaggggagcagcagttcatcctcaacggagtatgtagtacga
gttccaaaaaacaccaataagaaatacagtataatggctttcaatgctggtgataaagtc
agttgttccacatggactcaggctcgtatggagcgggacatgagtaatagacgtatatat
ggtgaggaggagacacaagagggggcagcagggagtgagtttggaaaaaaacagagagaa
gaagcaaggaggaagaagtatggcatcattacgaaagagttcaaggtagaggaccagcct
tggatccttaaagttaacggcaaggcaggaagaagatttaagggtataaaaaaagggggc
gttacagagaatgcgtcctactacatcttcacacagagtgccgatggtgcttttgaggca
tttcccgtgcacgcctggtataacttcacaccacaggccaaacaccgcacgctcacagct
gaggaagcagaggaagagtggggcaggagaaacaaagtggtgaaccacttcagtatcatg
ctccagcggcgtttaagagaacaggagcgaggaggaggagatgaggatgaggaggaagga
gaaaaaggcacaaagaaaaagaagaagggaggcagaggaggtgacctgcgaattcatgac
ctcgaggaagatttggaaatgagcagcgatgaaagtgatggcagcaatggagatgatgat
gaagccaaggcgaaagctaaaaaggaaaaaggtgccaaaggcaagggaaagaagaagaag
aaaaagggcagcgacttagaaggatttgaggacagtgacgatggtgactttgagggtttg
gaggtggactacatgtctgatgagagcagttcagaagaagaagaaccagagaagaccaag
cccaataagggagaggatgttcctaaagggattgatgaaatgtctgaaagtgaggaagag
agtgaggaagagaccaagaatgaggaagagaataaggaagaggaagaggaggaagatggg
aagaagacgccagtgcaggtggaaaagaagaaaaagaaagacagcagcggcgagtccgac
agctctgaggacagtgatattgaaggagaggcagcgtcagcactgtttatgaagaagcgc
acacctcctaagcgaggaggtggccgtggctcagcaggcagttcaagaacaggtagtcga
ccaggcacaccatctattgataatgctgccacttccaacactctccgtgctgctgccagc
aaactggagcaaggtaagcgacagacaactgtgccgagctcagaaactccagcagccaag
agattaaagatggagcccagtcctcaaagctcctcagggaaaagcacaccacagccagcg
tcagggaaatccacccccagcgccagtgatgtgctgctgacagaggatgcggtgcgcagg
tatctcatcagaaagcccatgaccactaaagacctgctgaagaagttccagactaaacgc
acaggcctcagcagcgagcagacagtcaatgtgctcgcgcagatcttaaagaggctcaat
ccagagaggaagaacatcaatgacaagatgcacttctacctcactgagtga
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