KEGG   Danio rerio (zebrafish): 326668
Entry
326668            CDS       T01004                                 
Symbol
ss18
Name
(RefSeq) protein SSXT isoform 2
  KO
K15623  protein SSXT
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    326668 (ss18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    326668 (ss18)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    326668 (ss18)
   GBAF(ncBAF) complex
    326668 (ss18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 326668
NCBI-ProteinID: NP_001278254
ZFIN: ZDB-GENE-030131-4867
Ensembl: ENSDARG00000002970
UniProt: A0A0R4IPF8
LinkDB
Position
2:complement(1524354..1540769)
AA seq 327 aa
MSVAFAPHRQRAKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSHYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMNQSGATPQLPHGHSMPSEGPTAPHMQSQMNGQMPG
PNHMSMQGPGPNQSSSIPSGSMNIPPSSHGSMGAYNHAVPSSQGIQSQGQMNINQGQPMG
NYGPRPNMNMQPNQGPMMHQQAPSQQYNMPPSGGSGQHYQGQQNPMGMMGQGNHVMGQRP
MPPYRPPHQGPPQQYPGQDEYYTEQYSHGGQGAPEGPSQGAPSQYPNYPQSQGQQYSAYR
APQPGPPQGQPQRPYAFDQGQYGNYQQ
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtctgtggcttttgcaccgcaccggcagcgtgccaagggcgatataacgcctgccggg
atacagaagttactggatgaaaacaatcagctgattcagtgcatcatggacttccagagt
aaaggaaaaacagctgaatgttcacactaccaacagatgctgcacagaaatctggtgtat
ttggcgacaatagcagactctaatcagaacatgcagtctctgctccctgcgccgcccact
cagaacatgcctatgaatcagagcggagccactcctcagctgccccacggtcacagtatg
ccctcagagggtcccaccgccccacacatgcagagccagatgaacggccagatgccaggt
ccaaatcacatgtcgatgcagggtccggggcccaaccaatcatccagcatacccagcggc
tccatgaacataccacccagcagccacggctccatgggggcttataaccacgccgtgccc
tcctcacagggcatacagtcacaggggcagatgaacatcaaccaggggcagcccatgggc
aattatggccctcgacccaacatgaacatgcagcccaatcaggggcctatgatgcaccag
caggctccttcccagcagtacaacatgcccccctctggtggcagcgggcagcattaccag
gggcagcagaaccccatgggcatgatggggcaaggcaatcacgtgatggggcagaggcca
atgccgccatacaggccaccacatcaaggacctcctcagcaatatcccggtcaggatgaa
tattatacggagcaatacagccatggaggacagggggcaccagagggtccatcacaaggc
gctccaagtcagtacccaaactacccgcagagtcaagggcagcagtattcagcctacaga
gccccgcaacccggaccaccacagggacaaccacagcgcccgtatgcttttgaccagggt
cagtatggaaactaccagcagtaa

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