Danio rerio (zebrafish): 326729
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Entry
326729 CDS
T01004
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dre03032
]
326729 (pif1)
03029 Mitochondrial biogenesis [BR:
dre03029
]
326729 (pif1)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
326729 (pif1)
DNA replication proteins [BR:
dre03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
326729 (pif1)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
326729 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Herpes_Helicase
DEAD
UvrD_C_2
Mg_chelatase
RsgA_GTPase
ABC_tran
AAA_7
AAA_5
PhoH
AAA_16
FhuF
Motif
Other DBs
NCBI-GeneID:
326729
NCBI-ProteinID:
XP_073768623
ZFIN:
ZDB-GENE-030131-4928
Ensembl:
ENSDARG00000020289
LinkDB
All DBs
Position
2:complement(19470653..19490001)
Genome browser
AA seq
639 aa
AA seq
DB search
MLGQMEPAELQCTVAVERLNPAGQAIKRQLIRKGTVTLGRNEFQEMILRVHDGKAPQNFM
LRDFQLFTRFAKDGKCTVKFIPENTQVLVSDCPPDRLKMFLKTLSIKHQASQSSKPLSDR
EKLRAGLPRAFETVSPLQLKDVEKANELRSRVNAPMQPRCLAERPANKVLGDRKQVKRPR
PDCDASPVKALHPNKKPVLVLPVAQKLSKEQTAVLNAVLSGKNVFFTGSAGTGKSFLLKR
IVGSLPPKSTYATASTGVAACHIGGTTLHSFAGIGSGSAPLEQCIELAQRPGVLRHWTSC
KHLIIDEISMVEAEFFDKLEAIARSIRRSTEPFGGIQLIVCGDFLQLPPVTKGKEKANFC
FQSRSWRKCIHMNMELMEVRRQTDKTFISLLQAVRVGRVTEEVTAQLLKSANHCIERDGI
LATRLCTHKDDVELTNENKLKQLPGVVRMYEAVDSDPMLVQTIDAQSPVSRLLQLKVGAQ
VMLTKNLDVQRGLVNGARGVVVDFQPGNQGLPRVRFLCGAVEVMKRERWMFKAPGGLYLS
RQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPRV
VQANQDVLIFYKRLRKERLLMQSSMNDFVGQSNKENSRW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgctggggcagatggagccagccgagcttcagtgcacagtggcggtggagcgtttgaat
cctgcaggtcaggccatcaaacggcagctcatccgcaaaggcaccgtcacattagggcgt
aatgagtttcaggagatgattctgcgcgtccacgacggcaaagctcctcaaaacttcatg
ctgcgcgacttccagctctttacgcgcttcgcaaaggatggcaaatgcactgttaaattc
atcccggagaacacgcaggtcctggtctccgattgtccgccggaccgtttgaagatgttc
ctgaagacgctcagcatcaagcatcaggcgtcccaaagcagcaagcctttgagtgaccgg
gagaaactgcgagctggtcttcctagagcctttgagacggtcagtcctctccagctgaaa
gatgtagagaaggcaaacgagctgaggagcagggtgaacgccccaatgcagcccagatgt
ctggcagagagacctgccaataaagttctgggtgaccgcaaacaagtgaaaaggcctaga
cctgattgtgatgctagcccggttaaagcacttcaccccaataagaagcctgtcttggtt
ttgcctgttgcacaaaagctcagcaaagaacaaactgcagttctcaatgccgtcttgagt
ggcaaaaatgtgtttttcacgggcagtgcaggtacagggaagtcattcttgcttaaaagg
attgttggctctctgcctccaaaaagcacatatgcaacagcgagcactggtgtcgcagct
tgtcacataggagggacaacattgcacagttttgcaggtattgggtcgggttctgcacct
cttgaacagtgtattgagctcgctcagcgccccggggtactgcgacactggacatcctgc
aaacacctcattattgatgagatctcaatggttgaggctgagttctttgacaaactagaa
gccatagccaggtccatcagaagatccacagagccatttggaggcattcaactgatagtg
tgtggagactttcttcaacttccacctgtaacaaaaggaaaggagaaagctaacttctgt
ttccagtcgcgaagttggcggaagtgtatccacatgaacatggagctgatggaagtgcgc
agacaaacagacaagaccttcatttctctcctccaggctgtgagagtgggcagagtaaca
gaggaagttacagcacagctactgaaaagtgccaatcactgcattgagagggatggtatc
ttagcaaccaggctttgcacacacaaggatgatgtggagctcactaacgagaataaactc
aaacagttaccaggggtcgtgcggatgtatgaggctgtggatagtgacccgatgctggtt
cagacaattgatgctcagagtccagtgagtcgactgctacagctaaaagtgggagctcag
gtcatgcttactaaaaaccttgacgtccagaggggtctggtaaacggagccagaggagta
gtggttgactttcagccaggaaatcaaggactcccccgagtgcggtttctctgtggggca
gttgaggtaatgaagagagagcgctggatgtttaaagccccaggagggctgtacctgagc
cgacagcagctgccactcaaactagcctgggccatttcaattcacaagagtcagggcatg
actctggattgtgtggagatctctttggcgcgtgtgtttgagagtggccaggcttatgtt
gctctgtcacgggctcgcagtctggaaggtctgcgtgtgatggactttgaccctcgagtg
gttcaggccaaccaagatgtgctgattttctataagagactaaggaaagaaaggctcctc
atgcagtcatcaatgaatgattttgttggacagagcaataaggagaactcccgctggtga
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