Danio rerio (zebrafish): 327020
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Entry
327020 CDS
T01004
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03013
Nucleocytoplasmic transport
dre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
327020 (rnps1)
03015 mRNA surveillance pathway
327020 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
327020 (rnps1)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
327020 (rnps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
RRM_5
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
327020
NCBI-ProteinID:
NP_956055
ZFIN:
ZDB-GENE-030131-5228
Ensembl:
ENSDARG00000116743
UniProt:
Q6PG31
A0A0G2KGY0
LinkDB
All DBs
Position
3:complement(9850528..9862636)
Genome browser
AA seq
283 aa
AA seq
DB search
MAPSPTKRRERSEDKPRERGKEKAPAKEGAEKERGRDKIRKRRNNSTGSSSSRSSSSSSS
SSGSSSGSSSGSSSSSGSSRSGSSSSSRSSSSSGSSGSPSPSRRRHDNRRRSRSKSKSQK
RTDEKERKRRSPSPKPTKLYLGRLTRNVTKDHIQEIFATYGKIKMIDMPSDRLHPNVSKG
YAYVEYESPEDAQKALKHMDGGQIDGQEITATAILAQRIRPAPRRLSPPRRMPPPPPMWR
RTPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcaccaaccaagcgcagggagcgatcagaggacaagcccagggaacgaggg
aaggagaaagctcctgcgaaggagggagccgagaaggagagaggcagagataagatccgc
aagcgccgcagcaactccactggcagcagtagcagcaggtcgagctccagctccagcagc
agttctggctccagctccggctcctccagcggctccagctcttcttctggctccagtcgc
tctggctcttctagctcctcccgctcctctagttcatctgggtcatcggggtctcccagc
ccgagccgccgtcgccatgacaaccgccgccgctcacggtcaaagtccaaatctcaaaaa
cggactgatgagaaagagaggaagcggaggagcccaagccctaaacccaccaaactttat
ctgggaagactcaccaggaacgtcactaaggatcatattcaagagatcttcgccacatat
ggcaagatcaagatgattgatatgccatcagatcgtctgcaccctaatgtatcgaagggt
tacgcttatgtggagtacgagtctccagaggacgcccagaaagccctcaaacacatggat
ggaggtcagattgacggtcaggaaatcacagcaactgctattctggcccagaggatacgt
cctgctccgaggagactgtcacctccacgcagaatgccgccgcctccacccatgtggcgc
cgcacaccgcctcgcatgagaagaaggtctcggtctccacggcgacgctccccggtgaga
aggcgctctcgctccaggtctccaggccgcaggcgtcaccgctcgcgctccagttccaac
tcgtcccgctag
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