KEGG   Danio rerio (zebrafish): 327035
Entry
327035            CDS       T01004                                 
Symbol
rnf2
Name
(RefSeq) E3 ubiquitin-protein ligase RING2
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    327035 (rnf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    327035 (rnf2)
   03036 Chromosome and associated proteins [BR:dre03036]
    327035 (rnf2)
Enzymes [BR:dre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     327035 (rnf2)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    327035 (rnf2)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     327035 (rnf2)
    Noncanonical PRC1 (PRC1.1)
     327035 (rnf2)
    Noncanonical PRC1 (PRC1.3/1.5)
     327035 (rnf2)
    Noncanonical PRC1 (PRC1.6)
     327035 (rnf2)
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 RING_XB3-XBAT31 zf-Nse zf-RING_5 zf-RING_4 zf-rbx1 zf-RING_6 zf-UDP TRAF3_RING zf-C3HC4_5 zf-ANAPC11
Other DBs
NCBI-GeneID: 327035
NCBI-ProteinID: NP_571288
ZFIN: ZDB-GENE-030131-5243
Ensembl: ENSDARG00000010381
UniProt: A0A0H2UKC6
LinkDB
Position
2:26681086..26691575
AA seq 338 aa
MKMTQTVQTNGVQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDML
KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRD
EYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKHQIENGSGAEDNGDSSH
CSNASVHSNQEAGPSIKRTKTSDDSGLDMDNATENGGGDIALDGVSEIELVFRPHPTLME
KEDAAQTRYIKTSGNATVDHLSKYLAVRLALEEMRKNGEASPINVEAASEKQYTIYIPTA
SNQFTVLNGSFSLELVSEKYWKVNKPMELYFAPTKEHK
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgaagatgacacagacggtccagacaaatggggttcaacccctcagcaagacctgggag
ctcagtctatatgaattacagagaactccacaggaggccatcacggatggtctggagatt
gcagtgtccccacgcagcctgcacagtgagcttatgtgtcccatctgcctggacatgctg
aagaacactatgaccaccaaggaatgcctgcaccgtttctgtgccgactgcatcatcact
gctctcagatcagggaataaggagtgtccaacatgcagaaagaagctggtgtctaagcgc
tctcttcgtccagaccctaactttgacgctctgatcagtaagatctaccccagcagagac
gaatacgaagcccaccaggagagagtgctggcccgcatcagcaaacacaacaaccagcag
gcgctcagccacagtatcgaagaaggcctaaaaatccaggccatgaacagactgcagcgg
gggaagaagcatcaaattgaaaacggcagcggggcagaggacaatggggacagttcacat
tgcagcaatgcatcagtgcacagtaaccaagaggctggacccagcatcaaacgaaccaaa
acctcagatgactctggactggacatggacaatgccactgagaatggaggaggagacatt
gcgctggatggagtcagcgagattgagctcgtgtttcgtcctcacccaacgctgatggag
aaagaagacgccgctcagacaaggtacatcaagacttcagggaacgccacagtggaccac
ctttccaaatacttggctgtcagattggctctggaggaaatgcgcaagaatggagaggca
agccccatcaatgtagaggccgccagtgaaaaacagtacacaatctacatccctacagca
agcaaccagttcacagtcctgaatggctctttctccctggagctggtgagcgaaaagtac
tggaaggtcaacaagcccatggagttgtacttcgccccaacgaaggaacacaaatga

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