Danio rerio (zebrafish): 327143
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Entry
327143 CDS
T01004
Symbol
rhot1a
Name
(RefSeq) mitochondrial Rho GTPase 1-A
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
327143 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
dre03029
]
327143 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
dre04031
]
327143 (rhot1a)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
327143 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
327143 (rhot1a)
GTP-binding proteins [BR:
dre04031
]
Small (monomeric) G-proteins
Rho Family
Miro
327143 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_7
Arf
EF-hand_1
RsgA_GTPase
MMR_HSR1
AAA_22
AAA
EF-hand_8
AAA_25
AAA_5
Motif
Other DBs
NCBI-GeneID:
327143
NCBI-ProteinID:
NP_997869
ZFIN:
ZDB-GENE-030131-5354
Ensembl:
ENSDARG00000099996
UniProt:
Q6NVC5
LinkDB
All DBs
Position
3:25026147..25057034
Genome browser
AA seq
619 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDEVPPRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLYQEITKANVICIVYSVNNKKSIEKVTSHWIPLINERTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYSPEEKE
MKPSCIKALTRIFKISDLDNDGILNDNELNFFQRTCFNIPLAPQALEDVKNVVRKNMTDG
VKDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTQEYLFPLFKIPPDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPDELKDLFKVFPYMPWGPDVNNTVCTNEQGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIIQEQESQAAAITVTRNKRIDLQKKQTQRSVFR
CNVLGARGCGKSGFLQAFLGRNLVRQKRIREDHKSYYAISTTYVYGQEKYLLLHEVLPDV
EFLSEADLACDVVCLVYDISNPRSFEYCAKVYKKHFMDSKTPCVIIAAKSDLHEARQYYS
LSPLDFCRKHKLHPPQLFTCNTTEAPSKDLYTKLTTMAMYPHMTQADLKNSTFWLRASVG
ATVFAVLGFAMYKALLKQR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggacgtgaggatattactggtcggagaacccaaagtggggaagacctctctt
atcatgtcactcgtcagcgaggaatttcctgatgaggttcctccaagagccgaagagatt
actattcctgcagacgtcacacctgagcgagtgcccactcatatagtagattactccgaa
gcagaacagtcagatgagcagctttaccaagaaataacaaaggctaatgttatatgcatc
gtctattcagtgaacaataagaaatcaatcgaaaaagtgacgagtcattggattccactc
atcaatgaaagaacagataaggacagcagagtgccgctaatcctggtgggcaataaatct
gacctggtggagcacagcagcatggagaccatcctgcccatcatgaaccagtactcagag
attgagacctgtgtggagtgttctgccaaaaacctgaagaatatctctgagctgttttat
tatgcccagaaggctgttcttcaccccacaggacctctgtactcgccagaagagaaagag
atgaagccgtcttgcatcaaagcactcactcgcattttcaaaatatcagacctggataat
gatggcattctgaatgataacgagcttaatttcttccagagaacatgttttaacatacca
ctggcacctcaagccctggaggacgtcaagaatgtcgtgcggaaaaatatgaccgatgga
gtcaaagacaacggccttacactgaagggtttcctgtttcttcacacactcttcattcag
agggggaggcatgagaccacatggaccgtgcttaggaggtttggttatgatgatgatctg
gagcttacacaagaatacctgtttccactgtttaaaatacctccagactgcacaacagag
ctgaatcacaatgcctacctcttcctccagagtgtgtttgacaaacatgacaaagatcga
gactgtgccctgtctccagatgagctgaaggatttgttcaaggtgtttccctacatgccc
tggggtcccgatgtcaacaacacagtctgcaccaatgagcaaggctggatcacttaccaa
ggctacctttcccagtggacacttacaacatacctagatgtgcagcggtgtttggagtac
ctgggatatctcggctactctattattcaagagcaggagtcacaagcagctgccatcaca
gtcaccaggaacaagcgtattgacctgcagaagaagcagacccagcgcagtgttttccga
tgtaatgtcctcggggctcgaggctgtggtaaaagtggctttctgcaggctttcctgggc
aggaaccttgtgcgccagaagaggataagagaagaccacaagtcttattatgccattagc
actacttatgtttatggacaggagaaatatctgctccttcacgaggtgcttccagacgtg
gagtttctttctgaagctgatctggcttgtgatgttgtttgtctggtttatgacatcagc
aacccacgctcatttgaatactgcgctaaagtctacaagaaacacttcatggacagcaag
accccatgtgtgatcattgctgccaagtctgacctgcatgaagcccgtcagtactacagt
ctctcgccgttggacttctgccgaaaacacaagcttcacccgccgcagctgttcacctgc
aacaccaccgaagctccgagcaaggacctctacaccaaactcaccactatggccatgtac
ccacacatgacccaagctgacctgaaaaactctacattttggctgagggcgagcgtcggt
gccactgtctttgctgttctgggctttgccatgtacaaagctctcctcaagcagcggtga
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