Danio rerio (zebrafish): 327179
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Entry
327179 CDS
T01004
Symbol
top1b
Name
(RefSeq) DNA topoisomerase I, mitochondrial
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dre03032
]
327179 (top1b)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
327179 (top1b)
DNA replication proteins [BR:
dre03032
]
Eukaryotic type
DNA Topoisomerases
327179 (top1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
327179
NCBI-ProteinID:
XP_002666448
ZFIN:
ZDB-GENE-030131-5390
UniProt:
A0A8M1RL46
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Position
23:2751370..2784781
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AA seq
751 aa
AA seq
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MSGDHPHKHRQVESGSVEYNSHKHKDKHKDRQHGHKEQKRDKERENSKNGHSEHKSSSER
KHREKEKDRLKHKEKRKEEKFHGSDGKYRDKENGFVSPSSIKVEEDTDNHHTVKHEKPLK
RERDEDEYEHKPKKVKVENEKKVKKRKQEEEDSDFEERVEKKPKKKIKEEKKDTTGGKKK
AKNQPEEKWKWWEEERYTDGSKWRFLEHKGPVFPPPYEPLPGHIKFYYDGNAMKLSPAAE
EVATFYAKMLEHEYTTNEIFRKNFFKDWRKEMTSEEKSKITELKKCDFTQMHEYFKAQSE
ARKQMSKEEKQKNKEENERILQEYGFCLMDNHRERIGNFRIEPPGLFRGRGDHPKMGKLK
RRIRPEDIIINCSKDSVQPKAPPGTRWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSR
IKGEKDWQKYETARRLKKCVERIRAQYREDWRSKEMRIRQRAVALYFIDKLALRAGNEKD
EGETADTVGCCSLRVEHIKLHPQLDGQDYVVEFDFLGKDSIRYYNKIPVEKRVFKNLQLF
LENKQSEDDLFDRLNTSILNKYLQELMDGLTAKVFRTYNASITLQQQLKELTSPGENIPE
KILSYNRANRAVALLCNHQRAPPKTFEKSMQNLQTKIDEKKKQLSAAKKEHKAAKADAKA
LHDEKSKKAVETKKKAVQRISEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVSWCK
KWGVPIEKIYSKTQRDKFAWAIDMADEDFEF
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagatcatccacacaaacaccgccaggtggagtccggctctgtggagtacaat
tcacacaaacacaaggacaaacataaagacagacagcacggtcacaaagaacagaagaga
gacaaagagcgggaaaactcaaagaacggacacagtgaacacaaaagctcttcagagagg
aagcacagagagaaggaaaaagacagacttaagcacaaagaaaagagaaaagaagaaaag
tttcatggttctgatgggaaatatcgagataaagagaatggctttgtgagcccttcatca
attaaagtggaagaggacacagacaatcatcacaccgtcaaacacgagaaacctctcaag
agagagcgagatgaagacgagtatgaacacaagcccaaaaaggtaaaagtagagaatgag
aagaaggtgaaaaaacgcaaacaggaagaggaagacagtgattttgaggagagggtggaa
aagaaaccaaagaagaagataaaagaggagaagaaagacaccactggaggaaagaagaaa
gccaaaaaccagccggaggagaagtggaaatggtgggaggaggagagatacacagatggc
tccaaatggaggtttctggagcataaaggtcctgtgtttcctccgccatatgaacccctg
ccaggccatatcaagttttattacgatggaaatgccatgaaactgagccccgctgcggag
gaagtggccacattttatgcaaaaatgctggagcacgagtacacaactaatgaaatattc
agaaagaacttcttcaaagactggaggaaggaaatgacgtcagaggagaagtcgaagatc
acggagctgaagaaatgcgacttcactcagatgcacgagtactttaaagcacaatccgag
gccagaaaacagatgtcaaaagaggagaaacagaaaaacaaagaagagaatgagcgcatc
ctgcaggagtatggcttctgcctgatggacaaccaccgggagcgcatcggaaacttccgg
attgagcctccaggtctgtttagaggccgcggggatcatccgaagatgggcaaactgaag
cgccgcatccgacccgaggacatcatcatcaactgcagcaaagactcagttcagcccaaa
gcgccgccgggcaccaggtggaaggaggtccgtcatgataataaagtcacctggctggtg
tcctggacggagaacattcagggctccatcaagtacatcatgctcaaccccagctccaga
atcaagggagagaaggactggcaaaagtacgagacggcacggcggctgaagaagtgtgtg
gagcgcatccgggcgcagtaccgggaggactggaggagcaaagagatgaggattagacag
agagccgtcgcgctgtatttcatcgacaagttggctctgagggccggtaatgagaaggac
gagggggagacggcagatacggtgggctgctgctcgctgcgggtggagcacatcaaactg
catccacaactggacggacaggactacgtggtggagttcgacttcctgggaaaagactcc
atccgctactacaacaaaatcccagtggagaaaagagtctttaaaaaccttcagctgttt
ctggagaacaagcagtctgaagatgatctgtttgaccgactcaatacgtcgattctgaat
aaatatctacaggagctgatggatggattgacagccaaagtgtttcgcacgtacaacgcg
tccattaccctccagcagcagctgaaagaactgaccagccctggtgaaaacatccctgag
aagatcctctcctataacagagccaaccgagctgtggctcttctctgtaaccaccagagg
gcgccaccaaaaacctttgagaagtccatgcagaacctgcagacaaagatagacgagaaa
aagaagcagctttctgctgctaagaaggaacataaagcagccaaagctgatgccaaggct
ctccatgatgagaaaagtaaaaaggctgtggagacaaagaagaaggctgtgcagaggatt
tctgaacagcttatgaagctggaggttcaggccacagaccgcgaggagaacaaacagatc
gctctgggcacttctaaactcaactatctggacccgcgcatctccgtctcttggtgcaaa
aaatggggagtcccgattgaaaagatctacagcaaaacacagcgagacaagttcgcctgg
gctatcgacatggcagatgaggactttgagttttaa
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