Danio rerio (zebrafish): 327197
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Entry
327197 CDS
T01004
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04137
Mitophagy - animal
dre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
327197 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
327197 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
327197 (vcp)
03009 Ribosome biogenesis [BR:
dre03009
]
327197 (vcp)
04131 Membrane trafficking [BR:
dre04131
]
327197 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
327197 (vcp)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
327197 (vcp)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
327197 (vcp)
Membrane trafficking [BR:
dre04131
]
SNARE
SNARE associated proteins
Others
327197 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
327197 (vcp)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
327197 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
ATPase
AAA_18
DUF815
ABC_tran
IstB_IS21
nSTAND_NTPase5
NB-ARC
TsaE
AAA_24
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
327197
NCBI-ProteinID:
NP_958889
ZFIN:
ZDB-GENE-030131-5408
Ensembl:
ENSDARG00000020008
UniProt:
Q7ZU99
LinkDB
All DBs
Position
5:42404128..42414742
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGG
SGPSQGSSGGGGGNVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggtggagaatccaaaaacgatgatctttccactgccattctgaagcagaag
aacaggccaaataggttgattgttgatgaatctatcaatgaagacaacagtgttgtgtct
ctctctcaggcaaagatggatgagctgcagctctttaggggtgacacagtgctgctgaag
ggtaagaagagaagggagactgtttgcatcgtcctgtctgatgacacctgctctgatgag
aaggttcgcatgaacagggtggtccgaaacaacctcagggtgcgccttggcgacgtaatc
agtattcagccttgtccagatgtgaagtatggaaaacgcatacatgttctgccaattgat
gataccgtggagggcatcactggcaacctgtttgaggtctatctcaagccttacttcctg
gaggcttacaggccaatccgtaaaggtgatattttccttgtcagaggaggcatgcgtgct
gtggagttcaaagtggtggagactgaccccagcccctactgtattgtggccccagacaca
gtgattcactgtgaaggagaacccatcaagcgagaggatgaggaagagtctctgaatgag
gtgggttatgatgacattggaggggtgagaaaacagcttgcccaaatcaaagaaatggtg
gagcttcctctgagacacccagctctcttcaaggctattggtgtgaagcctccccgtggc
atcctgctgtacggacctcctggaactggaaagaccctcattgctcgtgctgtggcaaat
gaaactggagcgttcttcttcctcatcaatggccctgagatcatgagtaaactggcaggt
gaatctgagagcaatttgcgcaaagcttttgaggaagcagagaagaacgcaccagccatc
atctttattgatgaactcgatgctattgcacccaaacgagagaagactcacggtgaggtg
gagaggcgcattgtgtctcagctgctcactctgatggacggactcaagcaaagggctcat
gttatcgttatggcggctactaacagacctaacagcattgacccagctctcaggcgattt
gggcgctttgacagagaggtggacatcggcattccagatgcaactggaagacttgagatt
cttcagatccacactaaaaacatgaagcttgctgatgatgttgatctggagcaggtggct
aatgagacccatggtcatgttggtgctgatctggctgccctttgctcagaggctgccttg
caagccattcgtaagaaaatggacctcattgatttggaggacgagaccattgacgcagag
gttatgaactccttggctgtaacaatggatgactttaggtgggctcttagccagagcaac
ccatctgccctcagagagactgttgtggaggtgcctaacatcacctgggaggatatcggt
ggccttgatgacgtcaagagagagctgcaggagctggtgcagtacccagtggagcatcca
gacaaattcctcaagtttggcatgactccatccaagggtgtgctgttctatggaccacca
ggttgtggtaaaacccttctggccaaggccatcgccaatgagtgccaggccaacttcatc
tcaatcaagggcccagaactgctcactatgtggtttggagaatcagaggcgaatgtccgt
gaaatctttgacaaggctcgtcaggctgctccttgtgtgctcttctttgatgaattggac
tccattgctaaggctcgtggtggaaatgttggtgatggtggcggcgcagctgacagagtc
attaaccagatcctcacagaaatggatggaatgtccagcaagaagaacgtcttcatcatt
ggggccaccaacagaccagacatcattgaccctgccatcctcaggcccggacgtttggac
caactcatctacatcccactgcccgacgagaagtctcgcattgccattctcaaagctaac
ctcaggaagtctccaatctcaaaggatgtggacctggacttcttggccaagatgaccaat
ggcttttcaggtgctgacttgactgagatctgccagagagcctgtaaactggccatccgc
gagtccattgagaatgagatcagacgggaacgtgagaggcagaccaatccttctgcaatg
gaggtggaagaggatgacccagtgcctgagatcaggaaggaccatttcgaggaggccatg
cgctttgcccgccgctccgtcagcgataatgacatccgcaaatatgagatgttcgcacag
accctgcaacagagcagaggctttggcagtttcagattcccatccagtaaccaaggagga
agtggaccaagtcagggctcttctggtggtggaggcggcaacgtcttcaatgaggacaac
gatgatgatctttacggataa
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