Danio rerio (zebrafish): 327429
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Entry
327429 CDS
T01004
Symbol
cntn5
Name
(RefSeq) contactin-5
KO
K06761
contactin 3/4/5/6
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
327429 (cntn5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dre00537
]
327429 (cntn5)
Cell adhesion molecules [BR:
dre04515
]
Immunoglobulin superfamily
Contactins
327429 (cntn5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
dre00537
]
Others
327429 (cntn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
C2-set_2
Pur_ac_phosph_N
Interfer-bind
Sp38
PKD
Motif
Other DBs
NCBI-GeneID:
327429
NCBI-ProteinID:
NP_956098
ZFIN:
ZDB-GENE-030131-5640
Ensembl:
ENSDARG00000021584
UniProt:
Q7ZW34
LinkDB
All DBs
Position
18:complement(45075302..45519763)
Genome browser
AA seq
1056 aa
AA seq
DB search
MKADSSSSSSMSSRMRLRNSHGVGSSSQDWSPFSRHRYSALSSQEDYRSEESEEFGPVFI
QEPDDAIFSLDSDDKKIIMNCEARGNPVPTYSWLINGTNVDTEADFRYSLIDGNLIIHNA
SEVIDYGRYQCRAENSIGIVLSRDALLQFAYLGPFSGKTRGAVSVREGQGVVLMCAPPSH
SPEIIYSWVFNELPSFVAEDSRRFISQETGNLYIPKVQPSDVGSYVCQVKNTVTNARVLS
PPTPLTLKTDGVMGEYEPKIEAHFPQTVLAAKGVTVRLECFALGNPVPTITWRKMSGNIP
KKARLRKSQAVLEIPNIQLEDSGSYECKAENTRGGTAFRGHLQVYTLPQWISMINDTQLD
SGEQLRWECRATGKPRPTYRWLRNGEPLSTQSRVEMVNGELTIHRLQQADSGMYQCIAEN
KYGAIYSSAELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRLQP
SRRIMLLRNNTLRIINSSRSDEGSYVCRAENQFGSAELTTVLLVKEPMRVELSPLRVEVT
VGESVVLSCKVTHDPSLDVSFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILLKH
AGKYGCRAQTSTDSVLAEAELLVRGPPGPPGVVIVEEITASTATLSWSHGVDNHSPITTY
NVQARSPVSLGWQTVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSPPSR
AVRTKEAVPSVAPANVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFRVNGTRGWKEK
MVTSADSTTYKYRDETFPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQA
FAVSSSEIKVLWKPPSPGLGRPQGYEVSFWKDVEQEELGKKKRTLGNETNMLLSGLDGNT
QYLVSVKGFNSAGQGPSSTAVKISTKKNAPSLPPGNLMWIQEGNNVSLSWDPVKARDNES
EVIGYKVLLRQEGRGHSQVMRTPNSAVVLTLPEGGTYIIEVRAVSEGGEGAASAQVRVLT
SSGVRAKNGQLSVQNSPPGLAWTALFLSLMVPSFPL
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagacagttcgtcctcctcctccatgagctccagaatgaggttaaggaacagc
catggagtgggatcatccagccaggactggtctccgttctccagacacagatactcagcc
ctcagctcacaggaggactacaggagcgaagagagcgaggagtttggtccggtgttcatt
caagagcctgacgatgcaattttttccttggattcagacgataagaaaatcataatgaat
tgtgaagccagaggaaaccctgttccgacctacagttggctgatcaatggaacgaatgtg
gacacagaagcagatttccgctacagtttgattgatggaaatttaataatacacaatgca
agcgaagtcatcgattatggaagataccagtgcagagctgaaaacagcattggcatcgtc
ttgagtcgagacgccctcctgcagtttgcctatctcggcccgttcagcggtaagactaga
ggagctgtttcggtgagggaaggccagggggttgtgctaatgtgtgcccccccttctcat
tctccagagatcatctacagctgggtgttcaatgagctcccctcattcgtggcagaggac
agccggcgattcatctcgcaggaaacgggaaatctgtatatctccaaggtgcagccctca
gacgtgggcagctacgtgtgccaagtgaagaacactgtgaccaacgctagggtcctgagc
ccgccgacgcccctgactctcaaaacagatggagtaatgggggagtacgagcctaaaatc
gaagcacattttccccagacggtactggcagccaaaggcgtcaccgtgaggctggagtgc
tttgcccttgggaatcctgtccccacaatcacctggaggaagatgagtggaaacattccc
aaaaaggcccgtcttcgcaaatcacaggctgttcttgagatccccaacatccagctggag
gattctgggagttacgagtgtaaagctgagaacaccagaggaggcaccgctttcagagga
cacctgcaggtctacactctgccgcagtggatcagcatgataaatgacactcaactggac
agcggagagcagctccgttgggagtgtcgagccacaggaaagcccagacccacatatcgc
tggctgcgcaatggagaaccactcagcacacagagcagagtggaaatggtgaatggagag
ctaaccattcacagactccagcaggctgattcggggatgtaccagtgcatcgcagagaac
aagtatggagccatctattccagcgcagagctcaaaatactggcatcagctcccatgttc
aacaacaacccagtccgtctcatcgcaaccgttgggaaagacgtgtctctagagtgccgt
cctcgtgcttcacccaaacccagaatctcatggaggaaaaacgaccgaagacttcaaccc
agccgaaggatcatgttacttcggaacaacaccctgcgcatcattaactccagtcgctcg
gatgagggaagctacgtgtgccgtgcagaaaaccagtttggatcagcagagctgaccact
gtgcttctggtgaaagagcccatgcgggtggagttgagccccctgcgggtggaggtgacg
gtgggagagagtgtggtgctcagctgtaaagtcactcatgacccttcgctggacgtgtcc
ttcctctggctgctgaacaaccaaccgctcaacacacagcaggatggaggacactttgag
tacatccaaacacagtcctccaccgcagacctgatgatcaggagcatcctcctgaagcat
gctgggaaatatggctgtcgagctcagaccagcgctgacagtgtgcttgctgaagctgag
ctgctggtgcgagggcctcctggacctcctggagtggtgattgtagaggagatcacggcc
agcaccgccacactgtcatggagccacggtgtcgacaaccacagtccaatcaccacatac
aatgtacaagcacggagccctgtctctctgggatggcagacagtgaaaaccgatccagac
ccggtgacaggaagcatggagtcagccatggcagtggatctcaacccctgggtggagtat
gagtttcgggtggtggccacaaacagcataggcacaggcgacccgagccccccatccaga
gcggtgcgcactaaagaagcagtaccatctgtagcccctgccaacgttcgaggagggaac
ggccgcaggcatgagctggtcatatcctgggagccagtctcagaggagtaccaaaacgga
gaaggctttggctacatcgtggcgtttcgggtcaacggcacacgtggatggaaagagaag
atggtgacgtctgcagattccaccacgtacaaatacagagatgagacattcccccctctg
accccgtttgaggtgcgggttggggtttataacaacaaaggcgatgggcccttcagtgaa
gtggtcactgtgttctctgcggagggagagcccagagagccaccttcagaagtgcaggca
ttcgcagtctcttcctcggaaattaaagtcttgtggaagccgcccagtcctggacttgga
agaccccaaggatatgaggtgagcttctggaaggatgttgagcaggaggagttggggaag
aagaagaggacgttggggaatgagacgaacatgttgttgtcagggctggatggaaacacg
caatatctggtgtctgtgaaaggattcaacagcgccggtcaagggccatctagcacagcc
gtcaagatcagcacaaagaaaaatgccccaagtctacctccaggcaacttgatgtggatt
caagaggggaacaatgtttctctatcctgggatccagtgaaagcaagggacaatgagtca
gaagtcattgggtacaaggtattattgcgtcaagagggacgtggccacagccaagtcatg
aggactccaaattcagcagtggtcctgacgcttcctgaagggggaacatacatcattgaa
gtgcgcgcagtcagtgaaggaggtgaaggagccgccagcgctcaggtcagagtgctcacc
tcctcaggcgtgcgtgcaaagaatgggcagctctctgtccagaattcacctccaggcttg
gcatggactgctcttttcctgtcattaatggtgccttcttttcccttgtga
DBGET
integrated database retrieval system
