Danio rerio (zebrafish): 327495
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Entry
327495 CDS
T01004
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03013
Nucleocytoplasmic transport
dre03015
mRNA surveillance pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
327495 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
327495 (acin1b)
03015 mRNA surveillance pathway
327495 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
327495 (acin1b)
03041 Spliceosome [BR:
dre03041
]
327495 (acin1b)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
327495 (acin1b)
Spliceosome [BR:
dre03041
]
Complex C
Other components
EJC/TREX
327495 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
327495
NCBI-ProteinID:
NP_001292511
ZFIN:
ZDB-GENE-030826-12
Ensembl:
ENSDARG00000026842
UniProt:
F1Q511
LinkDB
All DBs
Position
7:24053769..24081361
Genome browser
AA seq
1259 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKTALEERGLAKSGQKNALIKRLKGALMLENLQRSSTCH
SGIQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREATEADESQSPAGPEEDDNDS
TSFLLEKHHIAHAHLSAGGGLPQDPGLVGSQKLDTGPVPVSQESSDSKAGRIWHPSFPSG
HEDVATPSPPRAVASLSVRVVGQPERQGLPPRSQEREGTAPVEAGPAHSMLQLSRSARAA
GGAQVDSDDDDDEEDDDDSEDDDEWGPASHGKKNVRAPPARAPPAAAPQRSRRKLQPPQH
IPPQLQPVLQPPLQLRQPTPPPSPPPELSFPLPDTPKQSPHDQDEPAGLAEAAVPGPGMV
SPPSLTRQESSSSSRSSSPEPPSTRKPGPLSLLVRKMESEGVFGSAQNIEVKGEGDMEVE
EQEHSEAAVQDSTRELSRTDVSSSVSTMPPDQQGIQDSELEKGEDEPKPSEETQNEKVDE
TSVPLCSTSTTTRSSRRQRIFSEVPPPESLMSPSKPEQLSMLTSISKGSEDSPMETEEFT
TTPASKHKEDKELKGLNNEAPEESPKPADENKKALTSPHATSEEEKMDKTRDRSKKDKRR
SSTSSQSSSSDADSESSSSHSSSSPSRDKSSPTSKTKDVEEKGRKGAEEKKAQSSREVKQ
EALSEPTGQVAMELEGLSHSESAVQQSDHQGADSSDSRPEESSAAKSFAARKISLSSKTE
IASSESEPVGGASRKRRWGSSTAVTAKKPSISITTESLKTLIPDIKPLQEAVVDLHPDEG
RLSVDEDSSGPREREEPEEDQGLKIRRTVTQIVPSDGHENGQKEMDEKDEEEDEDDEEEE
QKHSGEEKEKPRKQESSPDASVETPECDSQKVTPSDSLVRRSISQQKSGVSITIDDPIRT
GRQLSPPRGKTSNIIHVLHLVRPFTLGQLKLLLNRTGTMVEEGFWIDKIKSHCYVTYSTV
EEAVATREALHGVKWPASNPKVLRVDFSDQDELDFHKGLISGERAGVGHDPKASGPSSRP
PAAHPPIPPPNHEKEKERERDRDGGSSAVRDQWAERERAMERRERTRSEREWDRDKVKDF
GREERDRTRRSRSRERRRRERGKSKEKRTEKKEKPEEPPVKLLDDLFHKTKAAPCIYWLP
LTDEQATQRDQERADRIKEREKRRKEIFEEEDKKRKEREQERAKGRDRVGGNTAETRAGV
PRRSTEGERDRGKGGERERGREADKRKDAQRGQRDSKTTTAAGNRRSQSHNSTSRDRRH
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgaggatgttacgttagacggaaaaccgcttcattcgcttcgtgttgcg
gatttaaaaaccgccctggaagaaagagggctcgcaaaaagtggacagaaaaatgcactt
attaaacgactgaaaggggcactgatgttggagaatctccaacgatcttcaacctgtcac
agtggtattcagcccaactcacagattggagaggagatgagtcagaacagctttataaag
cagtacttggccaaacagcaggagctcctcagacagagactggagagagaagcccgggag
gccaccgaggcagacgagtcacagagtcctgcaggcccagaggaggatgacaacgatagc
acttcattcttattagagaaacatcacattgcacatgctcatctgtcagctggaggaggg
ctcccacaggaccctgggttagtaggatcacagaagttagatacaggccctgttcctgtc
tcccaagagtcatctgacagtaaagctgggaggatctggcatccttctttcccctctgga
catgaggatgtcgctacaccctcccctccacgagcagttgcctccttgtctgtacgtgtg
gttggacaacctgagcgccaaggcctgccgcctcgttcacaagaaagagagggaacggcc
ccagttgaagcaggtcctgcccattcaatgctgcagctcagtcgttctgcaagggcagca
ggtggtgctcaagttgacagtgatgatgatgatgatgaagaggacgatgatgacagtgag
gacgatgatgagtggggtccggcctcgcatgggaagaagaacgtacgggctcctccagca
cgtgctccaccagccgctgccccccaacgctcccgtcgaaaacttcagcccccacaacac
atccctccccagcttcagccagtcctccagccacctctgcagctccgtcagcccactcct
ccaccatctccacctccagagctctcattcccattacctgatactcccaaacagagtcca
catgaccaagatgagccagcgggcctagcggaagctgctgttccagggccaggcatggtc
tctcctccatccctcacacgacaggagtcaagctccagttctagatctagcagcccagaa
cctccatccacacgcaaacctggtccccttagcctcttggtccgcaaaatggagtctgaa
ggtgtgtttggtagtgcacagaacatagaggtgaagggtgaaggggacatggaagttgaa
gagcaggaacatagtgaagcagcagtgcaagactcaactcgggagctttctaggacagat
gtgtcctcctcagtatccacaatgccccctgatcaacaaggtattcaagattctgagttg
gagaaaggggaagatgagccaaaaccaagtgaggagacgcaaaatgagaaagtggatgag
acttctgtaccattatgttcgacttcgaccaccacgcgctcatctaggaggcaacgcatt
ttctctgaggtcccaccacctgagtcactcatgtcaccttccaaacctgagcagttgtca
atgctcacctccatttcaaaaggctctgaagattctcccatggaaacggaggaatttaca
acaacgcctgcatcaaaacacaaagaggacaaagaattgaagggtttgaataatgaggca
ccagaagagtcacctaaaccagcagacgaaaataaaaaggccctaacttcacctcatgct
acatctgaagaagaaaagatggataaaacaagagaccgttcaaagaaagataaaagacgc
tcctcaacatcaagtcagtcgtcatcatctgatgcggattcagaatcatcttcctctcat
tcttcaagctctccttcacgtgataaatccagcccaaccagcaaaacgaaggatgtagaa
gagaaaggacgaaaaggtgctgaagaaaagaaggctcagtcttcaagggaggtaaagcag
gaagctctctctgagcctacaggccaagttgccatggaactggagggcctctctcattca
gagagtgctgtgcaacagtccgaccaccagggggcagattcaagcgactcccgcccagag
gagagctctgctgcaaaatcgtttgctgcccgcaagatctccctgagcagtaaaacagag
attgcatcatctgagtcagagccggtggggggagccagcaggaagagacggtggggttcc
agtacagcagtcacagccaagaaaccatcaatcagcatcaccactgagtcgctgaagaca
ttaattccagacatcaagcccctgcaggaggcagtagtggatttgcacccagatgagggc
cgtctctctgtggatgaggactcctctggccctcgtgaacgagaggaaccggaagaggat
cagggcctgaaaatcagacgcacagtgacacagattgttccatctgatggacacgagaat
ggccagaaagaaatggacgagaaggatgaggaggaagatgaagatgatgaagaagaagag
cagaaacactcgggagaagaaaaggagaaacctaggaaacaggaaagctcacctgatgct
agtgtggaaacaccagaatgtgattctcaaaaagtcacacccagtgattctttagtaagg
cgctccatcagtcagcagaagtcaggtgtgtccatcactatcgatgaccccatacgaacg
ggccgccagctttctcctcctcgtggaaaaacctccaacatcatacatgtccttcacctg
gtgcggcctttcaccttaggccagctgaagttattattaaatcggactggcacaatggtg
gaggagggtttctggattgataagatcaagtctcactgttatgtcacatactccactgta
gaggaagcagtggccactcgagaagcactacatggtgtgaaatggccagcaagcaatccc
aaagtactacgtgtggacttcagtgaccaggatgagttggactttcacaaaggtctgatc
tctggtgaacgtgcgggtgtaggtcatgaccctaaagcctcaggaccgtccagccggccc
cccgccgctcatccaccgatccctcctccaaaccatgaaaaagagaaggaacgcgagaga
gacagagatggaggttcttcagctgtcagagaccagtgggctgagagagaaagggccatg
gagaggagagagaggacccgttctgagcgggagtgggatcgggataaagtcaaggatttc
gggcgggaggagcgagacagaacgagaaggtctcgatcgagggagcgaagacgcagagag
agaggcaagagtaaagagaagaggacggaaaagaaagaaaaaccagaagagcctcctgtt
aaactgctcgatgacctcttccacaaaactaaagcggctccctgtatatactggttaccc
ctcacagatgaacaggcaacacagagagatcaggagcgagccgaccgcatcaaggagcga
gagaagaggaggaaggaaatctttgaggaagaagacaaaaaacgaaaagaaagagagcaa
gagagagcaaaaggccgcgaccgagtgggaggaaacacagcagaaaccagagctggagtt
cccagacggtcaaccgaaggggagagagaccgagggaagggcggagagagagaaagagga
agagaggcggacaagaggaaagatgcacagagaggccaacgtgactccaaaaccaccaca
gcagcgggcaacagacgctcgcagagccacaacagcacctccagagacagacgacactga
DBGET
integrated database retrieval system
