KEGG   Danio rerio (zebrafish): 327568
Entry
327568            CDS       T01004                                 
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a isoform 1
  KO
K15188  cyclin T
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    327568 (ccnt2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    327568 (ccnt2a)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     327568 (ccnt2a)
    Brd4/P-TEFb complex
     327568 (ccnt2a)
    7SK RNP complex
     327568 (ccnt2a)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 327568
NCBI-ProteinID: NP_001180310
ZFIN: ZDB-GENE-030131-5779
Ensembl: ENSDARG00000036685
UniProt: A0A2R8QAB1
LinkDB
Position
9:complement(23234233..23242684)
AA seq 693 aa
MAACRGSSSKWFFTREQLETTPSRRCGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMYHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQEPPLDT
KSNAYLQQAQELVILETIVLQTLGFEITIEHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQHKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHEF
LQILEKTPSRLKRIRNWRATQAAKKPKSDNQGSDSSSLAGSSLTQDPSLMDTLPGVSTST
AFSKGSTSFPVCLSGNSSSSLSLDSIANMQGTSYTYTAPSDWPQDQLRSDPYSVKQLPSH
SSMHPQRPDKSADLNPTKHEHKVSGGTKHQATTYPPHAAPTQKMSLDKYREKHAAELAVQ
KRKQEQQNVETEVYGATTQTDHRKHLPHLSHGQQGAGVTTASPLKIKLPGQDKIQDKCEK
GSSLKLRLPVPSQSEKGGSSKEELKMKIKVSSERHSSSDEGAAKSKHSSPLVSKEKHRDH
SAHRHHHKHGHSHTHTHSGNGRSSLEVPTTGSVADGPSSASSSSRKRVNPEASHNHHSKK
NKSSKSGAGSSSHCSSVQQCVSSHNSVLNLPFPPPPVTYQVGYGHLSTLVKLDRKPVESH
GPENACLANGQHTDCKDTFVMLDSLLSAQAMNS
NT seq 2082 nt   +upstreamnt  +downstreamnt
atggcggcgtgccggggatcatcgtccaaatggtttttcacccgggaacaactcgaaacc
accccgtcccgccgctgcggagtggagccagacagagagctgtcgtatcgacagcaagcc
gcgaatcttattcaggacatgggccagagactaaatgtttctcaactcacaataaatact
gccattgtttacatgcacagattttatatgtaccattctttcaccaaattccacagaaat
atcatctccccaacaacattatttctggctgcaaaagttgaagagcaaccacggaaactc
gaacatgtcattaaagtagcgcatgcatgtttaaacccccaagagcctccactggatacg
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaaaccatagtgctg
cagacattaggctttgaaataacaattgaacatccacacactgatgtggtgaaatgttcc
cagctagtgcgagcaagcaaggatctggcacagacttcctatttcatggctaccaacagt
ctgcacctcaccaccttctgcttgcagcacaagcccacagtcattgcctgtgtctgcatt
catctggcctgcaagtggtccaactgggagatcccggtttccaccgatggaaagcactgg
tgggagtatgtggacaactcagttacacttgaacttcttgatgaactgacccacgagttt
ctgcagatactggagaagacgccaagcaggttgaagagaattcgtaactggagggctaca
caagctgctaaaaagcccaaatcagataatcagggctcagacagcagttctttagcggga
tcctcattaacccaggatccttccttgatggatacccttcctggggtctctacaagtaca
gcattctccaaaggctctacgtctttcccagtgtgtctgtcaggcaactcgagcagcagc
ctttctctcgattccatagccaacatgcagggaacctcatatacttacactgctcccagt
gactggcctcaggaccaactgcgctcagacccgtattctgtcaaacagcttccctcgcac
agttctatgcacccacaacggcctgataaaagtgcagatttgaaccctaccaaacatgaa
cacaaagtgagtggtgggaccaagcaccaggccacaacctatcctccccatgcagcaccc
acacagaaaatgtctctggacaagtacagggagaaacacgctgctgagctggcagttcag
aaacgcaaacaagagcagcagaacgtggagactgaggtctacggtgctacaacacagaca
gatcaccgcaagcacctgccccacctgtctcatgggcagcagggagcaggagtcaccaca
gcctcgcccctgaagataaagctgcctgggcaggacaagatccaggataaatgtgagaaa
gggagctctttaaaactgcgtcttccggtcccctcccagagcgagaaggggggatcaagt
aaagaggagctaaaaatgaaaataaaggtgtcctctgagcggcacagctcctcagatgaa
ggtgctgcaaaaagcaaacattccagtccacttgtgagcaaggagaaacacagagaccac
tcagcccatcgtcaccatcataaacacggccattcgcacacacacacgcatagtggcaat
ggcaggagcagcctcgaggtgcccacaactggttccgttgctgatggaccaagctcagct
tccagttcatcgcgcaagagggtgaaccccgaagccagccacaatcatcactccaaaaag
aacaaaagctccaaaagtggtgcaggtagttcctctcattgttcctctgttcagcagtgt
gtgtcatctcacaactctgtacttaacctacccttcccccctccccctgtcacataccag
gtgggctacggacatctcagcaccctagtgaaactggacaggaaaccagtggagagtcat
ggccctgagaatgcctgcctagctaatggccaacacacagactgcaaagacacttttgtc
atgcttgattcgctgttaagtgcccaagcaatgaactcttga

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