Danio rerio (zebrafish): 327606
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Entry
327606 CDS
T01004
Symbol
ythdf1
Name
(RefSeq) YTH domain-containing family protein 1
KO
K20102
YTH domain-containing family protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
327606 (ythdf1)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
327606 (ythdf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Cbm74
Motif
Other DBs
NCBI-GeneID:
327606
NCBI-ProteinID:
NP_997878
ZFIN:
ZDB-GENE-040426-2786
Ensembl:
ENSDARG00000016447
UniProt:
Q802Z0
LinkDB
All DBs
Position
8:23105180..23119981
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AA seq
614 aa
AA seq
DB search
MSTTSIDPQTSKGQDAKVQNGSLHQKETVHDNDFEPYLTGQSNPNNSYQSMTDPYLSSYY
APSIGFPYPLSEAPWSTGGDPPIPYLTPYAPLSNGDHHFMHDTVFGQPGGLGSSIYPHRF
NFFPENPAFSAWGTSGSQGQQTQSSAYGGSYSYPPSSLGGTLVPDGQTGFPSDTLNKAPG
MNSLEQGMVGLKIGGDVTGGGSGVKTVGSVIGGGPVAAAVATGNGGTPIGLPPPKPTSWA
AIASKPAKPQQLKVKSKPGMPMAGGTLPPPPIKHNMDIGTWDNKGPVTKVASSLPPHHHH
QQQPPLHSQGHLPPHPHGLPPPPQPPMPSAQSLAQQMAMQGPPPPQPYQNHAPAPPPQTR
WVAPRNRNPGYGGGGSVDSSGSSSGGGVGNGGGGGPPGSGAIESHPVLEKLRAAHSYNPK
EFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRAINGKGPVYLLFSV
NGSGHFCGVAEMRSPVDYGTSAGVWAQDKWKGKFDVDWLFVKDVPNSQLRHIRLENNDNK
PVTNSRDTQEVPLEKAKQVLKIIATYKHTTSIFDDFSHYEKRQEEEEVVRKNLEPAPIQN
RSRLDQERQNRNKQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaccagtattgacccacagacatcaaaagggcaagacgctaaagtgcaaaat
ggctctcttcatcagaaggaaacggtccacgacaatgactttgaaccatacctcactggc
cagtctaatccgaataacagttaccaatccatgaccgacccatacctgtctagctactac
gccccctcaattgggttcccgtaccccctcagcgaggctccctggtccacaggtggagac
ccgccgatcccatacctcactccgtatgcccccctcagcaatggagaccatcacttcatg
catgacactgtgtttggacagccggggggtctgggcagtagcatttatccacaccgcttt
aactttttccccgaaaaccctgcgttttctgcctggggtacgagtggctcccagggccag
cagactcagagttctgcatatgggggcagctacagttacccgcccagttctttaggtgga
accctggtgccagacgggcaaacaggcttccctagtgacaccttgaataaggcaccaggt
atgaatagcttggagcagggcatggtggggctgaagatcggtggtgatgtgactggaggt
ggttccggagttaagacggtgggctccgtgattggaggagggccggtggctgcggcggtg
gccacgggtaatggtgggactcctattggactgccgccccctaagcccacatcttgggca
gccattgctagcaaaccggccaagcctcagcaactgaaggtgaagagtaagccagggatg
cccatggctggaggcaccctgcctccgccgcccatcaaacacaacatggacattggcact
tgggataataaggggcctgtgaccaaagtggcatcatcattgccacctcaccaccaccac
cagcagcagcctcccctccactcccagggtcaccttccacctcaccctcatggactgcca
cccccacctcagcccccaatgccgtctgcacaatcacttgcccagcagatggccatgcag
ggcccaccccctccgcagccttaccagaaccacgcccctgctcctcccccgcaaactcgg
tgggttgccccacgcaatcgcaaccctggttatggtggtggaggaagcgtggacagcagt
ggctcctcgagtggtggaggggtcggcaatggaggcggaggtggcccaccgggctccggc
gccatcgagtcccatcccgtcttagaaaagctgcgtgcggcacacagctacaaccccaag
gagttcgattggaacctgaaaaatggccgggtgttcatcattaagagctactctgaggac
gacatccatcgctccatcaagtactccatctggtgcagcacggaacatggaaacaagcgg
ctggattctgcgtttcgtgccatcaacggcaaaggtcctgtctacctgctgttcagcgtc
aacggcagcggacacttctgtggcgtggcggagatgcgttcgcctgttgactacggcacc
agtgccggtgtttgggcgcaggacaagtggaagggcaaatttgatgtggactggctgttt
gttaaagacgtgcccaacagtcagctcaggcacatccgcctggagaacaatgacaacaag
cccgtgaccaactcgcgtgacacacaggaggtgcctctggaaaaggccaagcaggtgctg
aagatcatcgctacctacaaacacacaacctccatcttcgatgacttctcacattacgag
aaacggcaggaggaggaagaggtggtaagaaagaatcttgagcctgctcctatccagaac
cgatcccgactggatcaagaacgccagaaccgaaataaacaatag
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