Danio rerio (zebrafish): 327627
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Entry
327627 CDS
T01004
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
327627 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
327627 (cnot3b)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
327627 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
327627 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
327627
NCBI-ProteinID:
NP_956134
ZFIN:
ZDB-GENE-030131-5838
Ensembl:
ENSDARG00000019842
UniProt:
Q7ZVL4
LinkDB
All DBs
Position
19:complement(10255465..10295181)
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AA seq
908 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVTEGVEQFEDIWKKLHNAANANQKEKYESDLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLIERHRFHI
RMLETILRMLDNDSIQVDSIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEEIPLPVVP
TSPAGHPDDEIFQHSSSTPTSTTSSSPIPPSPATCTTNSEDEKKRGHSTDSEISQSPIKN
GNQSSSLSSSSSLSSSSSGASSISLISMATLASSGSSASGSSSLLGNISVPLQNSGSYSS
ATQQQTQQSQQQHQPKNSASSHSNSTSASNSILLPTSASTSPPNTSTLGPLTPSSQSQTN
LGMSLSSSLGLGKGTSALTGTNQMPSLVLSGMPASLSGFLSGSTPAPYAQAAAAGCVGSG
LSSAIGTNISSTNSSGVVTSLGTNGSLGSTSLLGSGSGILGLGSTFAAVEPLPLLAPSPV
GSTLTSGSNVGVIGSSGGTSGTANATGSGTQPRPPSGPKQNGGSSYSAVVGDSTSDSALN
SASQSQNSQSSSLNLAVTNQLMDSGSSLLGSMTLAPSSPSPVYSESKAGGGSLLNGPHSY
TQPADTIKPQEPPSSLKSMAERVAQGSGLDGELSALHIPSDIFPSSTAPSGTPAAPQLSL
SEVSIPPSLGVCPLGPVPLSKDQLYQQAMQESAWAHMPHPSDSERIRQYLMRNPCPTLPF
HHQMPPPHSDSVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTHTHVHSLL
FIAEESQMHMRGCFMSRWCKNASGAPPFLYNHTFPLATPFVTPPSHSVRLNDSTSEIYGA
FFFLRQRS
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaacttcaaggtgaaatagacagatgtttgaaaaaagtcacagaa
ggggtagagcagtttgaggacatttggaaaaagctccacaatgcagccaacgccaaccaa
aaagaaaaatacgagtctgacctcaagaaagagattaaaaaattacagcgccttcgtgac
cagattaagacatgggtcgcctctaatgagatcaaagacaaaagacagcttgtggagaac
cgcaagctcatcgagacgcaaatggaacggtttaagatagtggagcgggagaccaaaacg
aaagcgtactctaaagagggtctcggccttgctcagaaagtcgatcctgcacaaaaagag
aaagaggaggtcggccagtggctaacgaacacaatagacacattgaatatgcaagtggac
cagtttgagagcgaggttgaatcgctttctgtccagaccaggaaaaagaaaggcgacaaa
gagaagcaggatcggatcgaggaactaaagcgattgatcgagaggcaccgatttcacatc
cgcatgctggaaaccatccttcgaatgctggacaatgactcgatacaggtggactccatc
cgcaagattaaagatgacgtggagtactaccttgattcctctcaggatcctgactttgag
gagaacgagttcctctatgatgaccttgatttagaggagatacccctgccagtagttccc
acgtctccggcaggtcacccagacgatgagatcttccagcactccagttctaccccgacc
tccacaacgtcctcttctcccattcctccctctccggcaacttgcactacgaattcggaa
gatgaaaagaaaaggggtcattcgacagacagtgaaatcagtcagtcgcctatcaagaac
ggtaaccagtcttcatctctgtcctcgtcttcttcactgtcctcctcatcctcgggagcc
tcttccatttctctaatctcaatggcgactctggccagcagcgggagctctgcatcaggt
agcagcagtctcttgggtaacatcagcgttcccctccagaactctggcagctatagttca
gcaacccagcaacaaacacagcaatcccaacagcagcaccagcccaaaaactcagcctcc
tcccactcaaactcaacctcggccagcaacagcatcttgctcccaacatccgcctccaca
tccccacccaacaccagcacactgggccccctgacgcccagctctcagagccagaccaat
ttgggaatgagtctatcttccagtcttggccttgggaaggggacttcagcattgactggc
acaaaccagatgcctagtctggttctctcagggatgccggcatccttgagcgggtttttg
agcggatccaccccggcgccttatgcacaagcggctgccgcaggttgtgtgggcagtgga
ctgtcttcagcgatcggaaccaatattagcagtacaaactccagtggagtggtaacctcg
ttggggactaatggaagtctgggctccacgagcctcttgggttctgggtctggcattttg
ggccttgggtctacattcgctgctgtggagcctttgcctttgctagctcccagtcctgtg
ggaagcacactgacctcagggagcaacgtgggagttattggaagtagcggagggacctct
gggacagcgaacgcaacaggaagtggcacacaaccacgaccacctagtggaccaaaacaa
aatggtggttcaagttatagtgctgtggtaggagacagcacatcagactccgccctcaac
agtgccagccaatcacagaacagccaatcctcatccttaaatttagctgtaacaaatcag
cttatggacagcgggtccagcctgctggggtcaatgacactggcacccagctcgccctca
ccggtgtacagtgaaagcaaagcaggcggtggaagcctgctgaacggcccacactcatac
acacagcctgccgacaccatcaagcctcaggagcctccaagctctctaaagtcaatggca
gagcgagtcgctcaaggctcagggttagacggagagctgtctgcactacatatccccagt
gatatattcccaagctccacggctccatcaggcactcctgcagctccacagttgtctctg
tcagaggtcagtatccctccatcattgggtgtgtgtccactgggccccgttccgctctcc
aaagaccaactctaccagcaagccatgcaagagtctgcttgggcacacatgcctcacccg
tccgactctgagaggatcaggcagtacctaatgaggaacccctgcccaacactgcctttt
caccaccagatgccacctcctcactccgacagtgtggagttttaccagagactgtctacc
gagaccctgttcttcatcttttactacttagagggcacaaaagcgcagtatctagcagcc
aaagccttgaaaaaacagtcatggaggtttcacacacacacacatgtacactctctttta
ttcatcgcggaggagagccagatgcacatgcgaggctgttttatgtctcgctggtgcaaa
aatgcatctggagcccctccctttctttacaatcacaccttcccattggccactcccttc
gtgactccgccctctcattcagtcagacttaacgacagtacatcggaaatttatggagcg
tttttttttttgcgccaaagaagttga
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