Danio rerio (zebrafish): 334230
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Entry
334230 CDS
T01004
Symbol
zranb1a
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin thioesterase ZRANB1
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
334230 (zranb1a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
334230 (zranb1a)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
334230 (zranb1a)
Peptidases and inhibitors [BR:
dre01002
]
Cysteine peptidases
Family C64
334230 (zranb1a)
Ubiquitin system [BR:
dre04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
334230 (zranb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
334230
NCBI-ProteinID:
XP_009305260
ZFIN:
ZDB-GENE-100212-3
Ensembl:
ENSDARG00000060257
UniProt:
A0A8M3BED9
LinkDB
All DBs
Position
12:47044787..47072244
Genome browser
AA seq
689 aa
AA seq
DB search
MTDLCVKWSCEYCTFENWPSAIKCTMCRAQXPSGTIITEESFPSSTGPRAGHPWEPERSD
SLLICPDSSARPRVRPAESSEPSGKWSCQVCTYLNWPRAVRCTQCRSLRQRVSSPTDTPQ
TSSTLRRPASAPAVDPCEEYNDRNRLNTRTQCWTCLACTYENALKSFRCVVCDHPRPNDT
FLPPEPEEPSPGRGVCGAAQKHSPPSSRREAELQIELAAGAHSRPEEMDFKKIKQIKNRM
RKTDWLFLNACAGVVEGDLSAVEAYKSSGGDIARQLNADEVRLLNRPSAFDSGFTLVHLA
IRFQRQDMLAILLTEVSQRAVKCIPAMVCPELTEQIRREISSSLHQRKGDFNCYFLTDLV
TFTLPADIEDLPPAVQEKLFDEVLDRDVQKELEEESAVINWSLELGSRLDSRLYALWNRT
AGDCLLDSVLQATWGIYDKDSVLRKTLHDSLHDCSHWFYTRWKEWESWYSQSFGLHFSLR
EEQWQEDWTFILNLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGDTLGYTRFQ
GVYLPLLWEQSFCWKSPIALGYTRGHFSALVGMESDGYDNRGAGANLNTDDDVTVTFLPL
VDSERKLLQIHFLSAQEMGSEEQQERLLRHWLDCCVTDGGMLVALQKSSRRRHHPLITQM
LEKWLDGYRQMHPCPTLSDGEEEEDDEDE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgacagatttgtgtgtgaagtggtcatgtgaatactgcacatttgagaactggccgtct
gctattaaatgcaccatgtgtcgagcgcagnggcctagtggcaccatcattacagaggag
tccttcccgagcagcaccggcccgcgtgcaggacacccatgggagcccgagcgcagcgac
agcctgctgatctgccctgactccagcgcccggcctcgtgtgcgtcccgcagagtcctcc
gagcccagcgggaagtggtcgtgtcaggtgtgcacctacctgaactggccccgagccgtg
cgatgtacccagtgccgcagcctccgtcagcgtgtctccagccctacagatacccctcag
acctccagcaccctccgaagacctgcatctgctccagcggtggatccctgtgaggaatat
aacgacaggaaccggctgaacacgcggacgcagtgctggacctgcttggcctgcacgtac
gagaacgccctcaaatcgtttcgctgtgtggtgtgtgatcatccgagacccaacgacacc
tttctgccgcccgagcctgaggagccttcacctgggcgaggtgtgtgtggagcagcacag
aaacactcgcctccgtcctccagacgcgaggctgagctgcagattgagctggcggccgga
gctcacagccgcccagaggagatggacttcaagaagatcaagcagatcaagaaccgcatg
aggaaaacagactggctgtttctcaacgcatgtgctggtgtagttgaaggagatctgtct
gcagtcgaggcctacaagtcttcaggtggtgatattgcacgtcagctgaacgcagatgag
gtgcgtctcctgaatcgaccctcagcgttcgacagcggcttcacactcgttcatctcgcc
atccgattccagaggcaggacatgctcgccatcctgctcacagaggtgtcccagcgggcc
gtcaaatgcatcccagcgatggtttgtcccgagctgacggagcagatccgcagagagatc
agctcctcactgcaccagcgcaaaggagacttcaactgctacttcctgacagacctcgtc
acgttcacactgccggcagatattgaagatcttcctcctgccgttcaggagaagctgttt
gatgaagtgctggaccgcgacgttcagaaggagctggaggaggagtcagcggtcatcaac
tggtctctggagctgggttctcgtctggacagtcgtctgtatgcgctgtggaaccgcacc
gctggagactgcctgctggattcggtgctgcaggccacatggggcatctatgataaagac
tctgtgctgaggaagacgctacatgacagcttacacgactgctctcactggttttacacg
cgctggaaggagtgggagtcctggtattctcagagtttcgggcttcacttttctcttaga
gaggagcagtggcaggaggactggaccttcatcctcaacctcgccagccagcccggggcc
agtttggagcagactcatatatttgttctggctcatatcctgcggcggcccatcatcgtt
tacggagtgaagtattacaagagcttcagaggagacactttaggctacactcgatttcaa
ggtgtgtatctgccgctgctgtgggagcagagcttctgctggaagagcccgatcgctctg
ggctacacacgaggtcatttttctgctttggttggcatggagagcgacggctacgataat
cgcggcgcgggcgctaatctcaacactgacgatgacgtcaccgtgaccttcctgccgctg
gtggacagcgagaggaaactgctgcaaattcacttcctgtcagcacaagagatgggcagt
gaggagcagcaggagcgtctcctccgccactggctggactgttgcgttaccgacggcggg
atgttggtggcgctgcagaagagcagcaggcgcaggcatcacccgctcatcacgcagatg
ctggagaaatggctggacggctaccggcagatgcacccctgtcccacgctctcagacgga
gaggaagaggaggacgacgaagacgagtga
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integrated database retrieval system
