KEGG   Danio rerio (zebrafish): 334347
Entry
334347            CDS       T01004                                 
Symbol
kdm4ab
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    334347 (kdm4ab)
Enzymes [BR:dre01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     334347 (kdm4ab)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     334347 (kdm4ab)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    334347 (kdm4ab)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 JmjN zf-HC5HC2H PHD PHD_4 Tudor_5 DUF7141
Other DBs
NCBI-GeneID: 334347
NCBI-ProteinID: XP_001339664
ZFIN: ZDB-GENE-030131-6279
Ensembl: ENSDARG00000019103
UniProt: F1QNG0
LinkDB
Position
2:complement(17450227..17492067)
AA seq 1045 aa
MASDMPVSRGIMTFHPTVEEFKNFSRYIAYMESQGAHKAGLAKIVPPKNWKPRGSYDDID
DLIIPAPIQQVVTGQSGLFTQYNIQKKAMTVKEFRKTANSDKFCSPRYDDFEELERKYWK
NVTFNPPIYGADVNGTLYDPDIKEWNVGHLNTILDTVEHESGITIEGVNTPYLYFGMWKT
TFAWHTEDMDLYSINYLHFGEPKSWYTVPPEHGKRLERLAKGFFPGSSQNCEAFLRHKMT
LISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGFNHGFNCAESTNFATRRWIDYGKQA
ILCSCRKDMVKISMDVFVKKFQPERYELWLEGKDNAPIDHSKPTPEAAEFLGGEAGAQEL
RIENQSNEGQKKSLAKQRIGTKRHRVCLDFPEEVLPKTETNDEAEYGKKGRLTPYTEQCK
EYTELKHEDRTLPLMGSTSLKMLPGSRSAEFSENVRGAGFSDADLDAKATSHISACAQPF
PKHHLSIASVPTVPHCLSAVPRVSTKPGVASLLFHRTLSPTDALQVHSYAAKAALCKPQT
PSPEKPREDLHIPDISLDVRPNTPTPPPDTPEHEIEGEKENNSMKRKLQPLSKLPRLHPL
LRENSSDDEIQEPTAEPEETDPWAKILAPMWQSRQRNFQIEKEFNFRMGLHPPYCAVCSL
FHTYNESDVISLGGFAAVGGNPQRTKPLIPEMCFTSSSEGHLSTPNLEADGTSQLISCSV
CSVRVHTSCYGVSQDAKLDSWRCSRCEANAITQDCCLCSLRGGALQRANNDKWVHVLCAV
AVLEARFVNIAERRPVDLSTIPFQRFKLKCQFCRKWVKKTTGCCVQCSHGRCSTSFHATC
AQAAGVQMHPDDWPFVVYFTCWRHKGGTHIERNMASMRELEKGQKVICKHKNGRYYHCEV
VELTKATFYEVIFDDGSFSDNLFPEDIVNRDCTRHGPPSEGEVVQVQWTDGLIYGAKFVS
DHIIPMYQVEFEDDSQLTVKREDVFSLDEELPKRVKSRLSVASDMRFKGVFVEKEVKQDS
KRQRVINSRYREDYIEPAIYRAILE
NT seq 3138 nt   +upstreamnt  +downstreamnt
atggcatctgacatgccagtttccaggggtataatgacctttcaccccaccgttgaagag
ttcaagaacttcagccgctacattgcgtacatggagtcacaaggtgcacacaaagcaggc
ctagccaagatcgtcccaccgaaaaactggaagcctcgaggttcttatgatgacattgat
gacctgatcatacctgcaccgattcagcaggttgtgactgggcagtcggggctgttcact
cagtacaacatccagaaaaaagccatgactgtgaaagagttccgcaaaaccgccaacagc
gacaagttttgcagtcctcgatatgatgattttgaagaactcgaaaggaaatattggaaa
aatgtaacctttaatcctcccatctatggagctgatgtgaatgggacactttatgacccg
gatatcaaagaatggaacgtagggcacttgaatactatcctagacacagtggagcatgaa
agtggaatcactatcgagggagtgaacacaccctacctctactttggcatgtggaaaacc
acttttgcctggcacacagaggacatggatctctacagcatcaattacttacacttcggg
gaaccaaagtcttggtacaccgtgcctcctgaacatggaaaaagactggagcggttagct
aaaggctttttccctggaagttcacaaaactgtgaagcctttctcagacacaagatgact
cttatttcaccttccattttaaagaagtatggcattccttttgaaaagatcactcaggaa
gctggagaatttatggtgacgtttccgtatggctatcatgcaggctttaaccatggtttc
aactgtgctgagtctacaaattttgccacgaggcgatggattgactatggaaaacaagcc
atactgtgttcttgcaggaaagacatggtgaaaatctccatggatgtgtttgtgaagaaa
tttcagcctgaacggtacgagctgtggttggaggggaaggacaacgcacccattgatcac
tctaaacccacgcctgaagcagctgagtttttaggtggagaggctggtgctcaagaactc
cgcattgagaaccaaagtaatgagggacaaaaaaagagcctggccaaacaaaggatagga
accaaaagacacagggtgtgtctggactttccagaggaagttcttccaaagactgaaaca
aatgatgaggctgaatatggcaagaagggccgattgactccatacacagaacagtgcaag
gagtatacagagttgaagcatgaagaccgcacacttccactgatgggttcaaccagttta
aagatgctgccaggatccagaagtgctgaattttcggaaaacgttcggggtgctggtttt
agtgacgcagacctggatgctaaagcaactagccatatttcagcctgtgcgcagcccttc
ccaaagcatcacctctctatcgcatctgtccctactgtcccacactgcttgtcagctgtg
ccacgggtatccaccaaaccaggggtggcaagccttctctttcatcgcaccctcagcccg
acagatgccctgcaggtccacagctacgcagccaaagctgcactctgtaaaccacaaaca
cccagtccagagaaacccagagaagacctacacataccagacatcagtctagacgtgagg
ccaaatacaccaactccacccccagacacaccagagcacgaaattgaaggtgagaaggag
aataacagcatgaagaggaaactgcagccgctcagcaagttgccgcgtttgcatcctctg
ctccgagagaactccagtgatgacgagatccaggagccaacagctgagccagaggagacc
gatccctgggctaaaatcctggctcccatgtggcagagcagacaacgcaactttcagatc
gagaaggagttcaacttccgcatgggcctgcatccaccgtactgtgcagtgtgttccctc
tttcacacctacaatgagagtgatgtaatcagcctgggcggttttgcagctgtaggagga
aacccacaaaggaccaaacctctgattccagagatgtgcttcaccagcagctctgaagga
catctgtccactcctaacctggaggcggacggcactagccaactcatcagctgctctgtg
tgcagtgtgcgcgtacatacaagttgttatggtgtgtctcaggatgctaagttagacagc
tggagatgttcccgctgtgaagctaacgccattactcaggactgctgtttatgctctctg
agaggaggagcactgcagagagccaacaatgacaagtgggttcatgtgttgtgtgctgta
gcagtgctggaggctcgcttcgtcaacattgcagagcgcagaccggttgatctcagcact
atcccgtttcagagatttaaactgaaatgtcaattctgccgaaagtgggttaagaagacc
acaggctgctgtgtgcaatgttcgcacggccgctgctccacttcctttcacgccacatgt
gcacaggcagctggagttcagatgcatcctgatgattggccgtttgttgtctacttcact
tgctggaggcacaagggcggcacccacatagagcgcaatatggcatccatgcgggagttg
gagaaaggacaaaaagtgatctgcaagcacaaaaatggccggtactatcactgtgaagtg
gttgagctgactaaggccaccttttatgaggttatatttgatgatggctcatttagtgac
aacctcttccctgaggatatagtgaatagagactgtacgcggcatggtccaccatcagag
ggcgaagtggttcaagtacaatggacagatggcctcatctatggagccaaatttgtatct
gaccacatcatccccatgtaccaggttgaatttgaagatgactctcagcttactgtgaag
agggaagatgtgttcagtttggacgaggagctgcccaaacgtgttaaatcccgactgtct
gtggcatcagacatgcgcttcaaaggagtgtttgtggagaaggaagtgaagcaggactca
aaaagacagcgagtgatcaactcccgttacagagaagactacattgaaccggccatctac
agagcaatcttggagtaa

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