Danio rerio (zebrafish): 334402
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Entry
334402 CDS
T01004
Symbol
brf1a
Name
(RefSeq) BRF1 general transcription factor IIIB subunit a
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
334402 (brf1a)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
334402 (brf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
334402
NCBI-ProteinID:
NP_956192
ZFIN:
ZDB-GENE-030131-6334
Ensembl:
ENSDARG00000017835
UniProt:
Q802Z8
LinkDB
All DBs
Position
13:33368495..33448647
Genome browser
AA seq
661 aa
AA seq
DB search
MGRCKTCGGTDIDVDQARGVAVCMGCGSVLEDNIIVSEVTFVESGGGGSSAVGQFVAGDA
SGNVPSLGGNFQTSVGRESRAATLQNAKRQINHLGHQLQMNQHCLDTAFNFYKMALSKHL
TKGRKSTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLVLARELCINAPAID
PCLYIPRFAQLLEFGEKSHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHEF
RRTIKEVISVVKVCEATLRKRLYEFEDTPTSELTIEEFMKTDLEQECDPPSFAAGLRKQK
LKQIEQELAKKVDDIEGEICGYQDEIEVELESCRPKARGIYASCSREDDVVSLASSSHLD
GEDDELRAAASHLYGENEEQEQDGERVSLTKRPSLSLLLGALPTSASLGLSESITKMGEE
KENDVEAEGGELDLSGIDEDEIDRYILNDKEVKVKTELWMIQNADYLKEQKEKEERIAKE
KEEGTYKERKPRKSTRRREPINANTADEAIEKMLEQKRISTKINYDVLKDLNKSSPKSPT
RQPEEASAGAKRTPAARQRKPQLTSPDIGKTVSSFGKRLQPLVRAQPSKKLALDQIGSSV
PVATPAVSAQTAVVVESGPVAYEEHADEEEEDEEDEHCVSAMQLMGGTSDYGYELDDDDG
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggggcggtgcaagacctgcggtgggacagacatcgatgtggaccaggctcggggtgtt
gcggtgtgcatgggctgcggctctgtgctggaggacaacatcatcgtctctgaggtcacc
tttgtggagagtggcggcggcggatcgtcagctgttggccagttcgttgctggcgatgca
tctggaaatgtgccttcactgggaggaaatttccaaactagtgtcgggagagagtccaga
gctgccactctgcagaatgcgaagcgacagataaatcaccttggtcatcagcttcagatg
aatcagcactgtctggacactgccttcaacttttataagatggctctctctaaacatctg
accaaaggacgcaaatcaactcatgtcatcgccgcctgcctctaccttgtctgccgaacc
gagggaacacctcatatgctgcttgatttgagtgacctcttgcaggtgaacgtgtacgtt
ttgggaaaaacattccttgttttagccagagagctgtgtatcaacgcaccagctatcgat
ccatgtctttatatcccacgctttgcacaactgctggaatttggagagaagagccatgag
gtttctatgacggcactgcgtctcctgcagaggatgaagagagactggatgcacacggga
cgaagaccttcaggcctctgcggagcagctctcctggttgcggcccgtatgcacgagttc
cgtcgcacaattaaagaagtgatcagtgtggtgaaagtctgcgaggccacgctaaggaaa
aggttgtatgaatttgaggacacgcccaccagtgagctgactattgaagagttcatgaag
actgatctggagcaggagtgcgacccgccttcattcgcagcaggactcaggaagcaaaag
ctaaaacagattgaacaggagcttgcgaagaaagttgatgatattgaaggtgaaatatgt
ggctatcaggatgagattgaagttgagttggaaagctgtaggcccaaagctagggggatt
tatgcatcctgttccagagaagatgatgtggtttccttggcatcctccagtcaccttgat
ggagaagatgatgaactgagggcagctgcatctcatctgtatggggagaatgaagagcag
gagcaagatggagagagagtttctctaaccaaacggccctcgttatcattgttgcttgga
gcgctgcccacttcggccagtttgggcctgtccgagtccatcaccaaaatgggagaggag
aaggagaacgatgtggaggcagaaggcggtgagctagacctgagcggtattgacgaagat
gagatcgatcggtatatcctgaatgacaaagaagttaaggtgaaaactgaactgtggatg
attcaaaacgcagactacctcaaagagcaaaaagaaaaggaagaaagaatagcaaaagaa
aaggaggaaggtacatataaagagcggaagcctagaaagtcaacacgaaggcgtgagccc
atcaatgccaacactgcagacgaagccattgaaaagatgttagaacagaaacgcatctcc
accaaaataaactatgatgttctgaaagacttgaacaaatccagcccaaaaagtcccact
cgccagcctgaagaagcttcagctggagccaaaagaacccccgcggcccgccaacggaaa
ccccaactgacttcacccgatattggcaaaactgtcagcagctttggcaagaggttacag
cccctggtgcgtgcgcagccctctaagaagctggcccttgatcagataggctcttctgtt
ccagtggcgactcctgctgtctcagctcagactgctgttgttgtagagagcggaccagtg
gcttatgaagagcatgcagatgaggaagaagaggatgaggaggatgagcactgtgtcagt
gccatgcaattaatgggcggcactagtgattatgggtatgaattagatgatgatgatggc
ttctga
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