Danio rerio (zebrafish): 334519
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Entry
334519 CDS
T01004
Symbol
rnf17
Name
(RefSeq) RING finger protein 17 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
334519 (rnf17)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Gene silencing
piRNA pathway
334519 (rnf17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_2
zf-C3HC4_4
DUF5402
Motif
Other DBs
NCBI-GeneID:
334519
NCBI-ProteinID:
XP_021334643
ZFIN:
ZDB-GENE-030131-6451
Ensembl:
ENSDARG00000056387
UniProt:
F1R3C5
LinkDB
All DBs
Position
9:31221969..31244553
Genome browser
AA seq
1521 aa
AA seq
DB search
MSETAVTCKICGSPYTLPEDEAVGNLPHVLLCGHIFCCTCLRALQSQGNVITCPECQMDT
RTSEEGVDGLEVDSRIIGLIYTARMNTKKGHSGDKWKSQKFKSPPSSAAVHTEENAEGKP
DVVKVLDEALTKATENLNQLDKLHQTLANGVHGQLRKERSRIIREIDEAVEKAKSILLKR
RSMLVSTLSSVDLLFSGGQMECKRIEERIKELRTAIQKARHVRQVPSLETYCDLEKILET
LHIPVDLESYDMSSLTLRSGLSCHLQVDGFTESVKVFLKITDTDDNCIVEEITVEPFQHV
VKSGVEMWDNSSQSVQGKADAIPRKSNNTRRFMEKMMEDTCPEIADTRVNAGLGRNLPVH
EPRRMERYNKGYRKQRRPQFEKPTNPQPKLVQYVVTTHIVNPGHFYVRYMAEHKLGQKLT
KKISEFCSGERSFFTFSDEITTGSLLFISWKDDMWCRVKVTELFQKECFQSVTKCLASEV
SRLCVYFLDYGFFKGFSIPSDGGLSGLNECLRRPDGITLIEMANWAPLAIKCSLKDIIPA
DLVKGWSSEASEEMRNVLRNETAEMQVFGEDGDALLVDLKKTSMADLKKNSMVSLREHLV
FMELARFYCPVITTGSAPLLFYPSVQPSLNVEVNAMVSHVNTPSDFYVQLVENTEYPLLH
SKLQDCYNQPKSNNECQVYCPSLSQACVAFHDQEWSRVQVTGFPGGRMVEVRFVDFGYKR
TLSVKDLRHIKDEFFVLPEMALWCNLNDVISSQETWANEACESFKELVEGKLMTVVAKKN
VPSSKPVPVCLFEISDDCTGASIGDELVKKGYAVYNKDTQVRDAQPLETTSWDPPFEEEA
LPVVMTPSSASEELKPSLSLPSCLKDIRVRVTHVTSPGNICVQLLQFDNQLKRIHDTLKN
LFSKSEPQEMQWEAEMYCAVNNTGVWERGQVCSVSTCGVAEVLRCDFGNTVKLHVDNLRP
LHPDLIGSFLLECNLSGVRPAGGRSTWTATACDFISHYLTGAMALMAIKEPSTRPVLVSL
FCSNRAGQNVSFADFLISEGLALKERKAEMVFSEESVLVTEPQPVISPTQTPPTPSRRIN
PPPERVKTHSYPPPELPPCGHILMSISAVSEQGVIYAMTHQAVCEFDRLRERLQQHIKTL
PRQKNYNWKGVLGCAVMGTDMFWYRGQVQEVIGGHVKVRYVDQGLVESIPVCHVYPMVLC
EDVPQLCVPCQINGVLPIGKGWQWDAVVLMKELLLGRSVNVQIMEHPKDPCGCVTVEIMV
DGMALSKIMVHHQYATFDPAISSQEDYVVKPPMPDLDDWDLNTEGLEEQPPVLGVYKELH
IPKERKHFPAKVKHIRTPNEVFLCVLDKSLCKLEQDESMEETLEQVNENIENLSLLTDFP
IECLCLAEYSDGKYYRAKILGFSEVTPSVKLLVRHVDFGSDDIIPLHKLRQLPASLHHFP
CAAVYVKLAGFKPTNVSSDLERIPYSLDWTMKAMMEMIDLLNGELTAVVTATKPQLTVLL
YNADGTLVHTPLVEKGLADYE
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagacagcggtaacgtgtaaaatctgtggctcaccgtacactttaccagaagat
gaagctgtggggaatctgccgcacgtgctgttgtgtgggcatatcttctgctgcacgtgc
ctgcgcgcgctccagtcccagggcaacgtcattacctgtccagaatgtcagatggacacc
agaactagcgaggaaggagttgatggtttagaggtggacagcagaatcattggcctcatc
tatacagcacgcatgaacacaaagaaagggcactcaggagacaagtggaagtcccaaaag
tttaagagcccaccctcatctgcagctgtccacactgaggagaatgcagaagggaagcca
gatgtagtgaaagttttggatgaagctcttacgaaggcaacagaaaatcttaaccaactt
gataaacttcaccagactcttgccaatggtgttcatggtcagctgaggaaagagagatct
cgaatcatcagagagattgatgaggccgttgaaaaagcaaagagcattctgctaaaaagg
cggtctatgttggtgtcaacattgagctctgtggatcttctcttctcgggcgggcagatg
gagtgtaagagaatagaagagagaataaaggagctgcgcacagccattcagaaagcacga
catgtgcgtcaggttccttctcttgagacctactgcgacctagaaaagattttggagacg
ttgcacattccagtagatcttgagtcatacgacatgagctctctgacgctgcgttcagga
ctcagctgccatcttcaggtggatggttttactgaaagtgtgaaagtctttttaaaaatc
acagataccgatgataactgtattgtagaggaaattacagtggagccttttcaacatgtt
gtgaagagcggtgttgagatgtgggacaattccagtcaatctgttcagggaaaggcagat
gccattcccagaaagtcaaataacacacgcaggttcatggaaaaaatgatggaagacact
tgtccagagatagcggacacacgtgtgaatgcagggcttggacgcaatttgccagttcat
gaaccaaggcgcatggaacggtacaacaaaggctatagaaaacaacgcagaccacagttt
gaaaaacccacaaatccacagcctaaattggtgcagtatgttgtgacaacccacattgta
aacccaggacatttctatgtgcgttatatggcagaacacaagttaggccaaaagttaacc
aaaaagattagtgagttctgctctggggaacgtagcttcttcactttcagtgatgaaatc
acgacaggctctctgctgtttatcagttggaaggatgatatgtggtgtagggtaaaagtg
accgagctcttccagaaagagtgtttccagagtgtgaccaaatgtctagcttcagaagtt
tctcgtctgtgcgtttacttcttggactatggcttctttaagggcttctctatcccaagt
gatggaggtttaagtgggcttaatgagtgtctacggaggcctgatggaattactctcatt
gaaatggctaactgggctcctctcgcaatcaaatgttcccttaaagatatcattcctgca
gacctggtgaaagggtggagttcagaagcaagcgaggagatgaggaatgtgctgcgcaat
gagactgcagagatgcaggtgttcggtgaggacggagatgcactgttagtggatctcaag
aaaacctcaatggcggatctaaaaaaaaactcaatggtgtctctgcgtgagcacctagtg
ttcatggagctggccagattctactgtccggtgataaccactggcagtgcacctctgctc
ttctacccttcagttcagccctcactcaatgtagaggtcaatgctatggtttctcatgtt
aacacaccatcagatttctatgtacaactagttgaaaatacagagtacccgctgttgcac
tcgaagcttcaggactgttacaaccagcccaagtcaaacaacgagtgccaggtctactgc
ccttctctctcacaggcctgcgtcgctttccatgaccaagaatggtccagggttcaggtc
acagggttccctggtggccgaatggtggaggttcggtttgtggactttggctacaaaaga
actctctctgtgaaagatctgagacatataaaggatgagttctttgttctgccagaaatg
gctttgtggtgcaacctgaacgatgtgatcagttctcaggaaacatgggctaatgaagcc
tgtgaaagctttaaagaactcgtggagggcaaacttatgactgttgtggctaaaaagaat
gtaccgagctccaaaccagtgcctgtgtgtctgtttgagatcagcgacgattgtactgga
gctagtattggagatgaactggtcaaaaagggttatgcagtttacaataaagacacccag
gtcagagatgcccagcccttggagacgacctcgtgggaccctccatttgaggaggaagca
ctgcctgttgtgatgactccttcttctgcttctgaagagctaaagcccagcctgagtctg
ccaagctgtctcaaagacatcagagttcgtgtgacacacgtcacttcccctggaaacatc
tgtgtgcagctgctgcagttcgacaaccagctgaagagaatccacgacacactgaagaat
ctcttctccaagtctgagccacaggagatgcaatgggaagccgagatgtattgtgctgtc
aacaacactggggtttgggaaagaggacaagtgtgtagtgtgtctacttgtggtgttgca
gaggttttgcgctgtgactttggtaatacagtcaaactccatgtagacaacctcagaccc
ctccatcctgatctgattggatctttcttgctggaatgtaacctcagtggtgtgaggcct
gctggtggtcgctccacatggaccgccacagcatgtgacttcatctctcactacttgacc
ggagccatggctttaatggctataaaggagccttccaccagaccagtgttagtttctttg
ttttgctctaatcgtgctggtcaaaatgtcagttttgcagatttcctcatcagtgaagga
cttgctctgaaggaaagaaaggctgagatggtcttttcagaagaaagtgttttggttacg
gagccacagccagtcataagcccaacacagactccacccacacccagccgccgcatcaac
ccaccaccagagagggtgaagacccactcgtaccctcctccagagctgccgccctgtgga
cacattcttatgagtatctctgccgtctcagaacaaggtgtcatttatgcaatgacgcat
caagcagtttgtgaatttgatcggttacgagagcgtctgcaacagcacattaaaaccctc
ccgagacagaagaactacaactggaaaggagttttgggctgtgctgttatgggaacagac
atgttctggtacagaggtcaggtgcaggaggttattggaggacatgtgaaggttcgatat
gtggatcagggactggtagagagtattcccgtttgtcacgtgtacccgatggttctctgc
gaggatgtgccacagctctgtgtgccttgtcagataaatggagtcttaccgattggcaaa
ggatggcagtgggatgcagtggtgctcatgaaggagttgctacttggacgttcagtcaat
gtccaaattatggaacacccaaaggatccatgtggctgtgttacggtggagataatggtg
gatggcatggcacttagcaagataatggttcaccatcaatatgccacgtttgaccctgcc
atcagcagccaggaggattatgtggttaagcctcctatgccagatttggatgactgggat
ctaaacacagaggggttggaggagcaaccgcctgtcctaggggtatataaagagcttcat
attcctaaagaaagaaaacattttcctgccaaggtcaagcatatccgcacgccaaatgag
gtgttcctgtgtgtcctggacaagagtctgtgcaaactggagcaggatgagagtatggag
gaaactcttgaacaagtgaatgagaatattgaaaatctgagcctgctgacagacttcccc
attgagtgtctctgtctggccgagtacagtgatggtaaatattatcgtgcgaaaattctg
ggattttctgaagtcactccctctgtcaagctacttgtgagacatgttgattttggctcg
gatgacatcataccattgcacaaattgcgacaactccctgcatcccttcaccatttccca
tgtgcagctgtttacgtcaagttggcaggcttcaaaccaacaaacgtgtcctcggatttg
gagcggattccttattccctcgattggactatgaaagccatgatggagatgatcgacttg
ttgaacggagagctcactgcggtggtcactgcaaccaaaccacaactgactgtgctgctg
tacaatgcggatgggacacttgtccacacacctctggtggagaaaggtcttgctgattat
gagtaa
DBGET
integrated database retrieval system
