Danio rerio (zebrafish): 334973
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Entry
334973 CDS
T01004
Symbol
ttf1.1
Name
(RefSeq) transcription termination factor 1.1
KO
K15225
transcription termination factor 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
334973 (ttf1.1)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
334973 (ttf1.1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SLIDE
Motif
Other DBs
NCBI-GeneID:
334973
NCBI-ProteinID:
NP_001353682
ZFIN:
ZDB-GENE-030131-6913
Ensembl:
ENSDARG00000091967
UniProt:
A0AB13A7V5
LinkDB
All DBs
Position
5:63359574..63373834
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AA seq
577 aa
AA seq
DB search
MDEMLSDSPNNVDGEKVKKKRSKTTEQHELTESPQEQTEKRRKKKKKRRNSTTESKDNLQ
TDTGKKKRRKLDNEGETSVMDDGVSDQHEAQTQELPGSSEEKTSRRLRTRKTATQTSYAE
MTEEEQTDTDTETEHEHEEAPNTSDEESDPLDAVTGDVTRTRKTRKIPVDLKLLAELKEF
CPNTAIESRCDNDINKMIRYDLARFREFKKQGIALRQGRFSEAENERLRQNVSDLLALTK
VKDAAMLFHPKQFPQAQMKLAKLKRKFGFYQKIAEGIPRPCQFVYIRGKKMFDHRHYKGN
YTEEEDKRLLKYYKKYGPKWEKISEKTGRSSTSVCKRLPQISSVKRKGPWTPEEVQRLLK
AVREHVLSVLKSANPNKKKPKRVRREILYENLPWTAIAAKVETRCYKTCREKWMSILSLR
MSSGTTFRGKAGLLARIRLIKAMYELQVEDAADIDWGSLTVAFGNVPPAHVQKMWHKMKN
YYVPDWNSRSFKDNVSHLHNDILPCLVRSCKGFDVNAVQVEQKELFRLSKIFKDIKEESQ
DIEEDGQDIEEDGQDIEEDGHDGDEETGEQENNSFNQ
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggatgagatgctgtcagattcacctaataacgttgatggggaaaaggtgaagaaaaag
agaagtaaaactacagagcagcatgagctcactgagagtccacaggaacagactgagaaa
cgccgcaaaaagaagaagaagaggagaaacagtacaactgaatctaaggataatctgcaa
acagacacaggcaaaaagaaaaggagaaagctggataatgaaggcgagacttcagtgatg
gatgatggagtctcagatcagcatgaagcacaaacacaagagctcccgggttcaagtgaa
gagaagacttctaggagattgagaacgagaaaaactgcgacacagacaagctatgcagag
atgacagaagaagaacagactgacactgacaccgagacagagcatgagcatgaggaagcg
ccaaacacgagtgacgaggaaagcgacccgcttgatgcggtaaccggtgacgttactaga
acgcgcaaaactcgtaagattccagtagatttgaagctcctggctgaactgaaagagttt
tgcccaaatacggcgatagaatccagatgcgataatgatataaataaaatgatcaggtat
gacctggcaagattcagggaattcaaaaaacaaggcatcgcactgagacaaggaagattt
tctgaagcagaaaatgagaggttaagacagaacgtgagcgaccttctggccctcacaaaa
gtgaaagatgcggccatgctcttccatcccaaacagttcccacaagcgcaaatgaaactg
gccaagttgaaaagaaagttcgggttttatcaaaagattgcggaaggaattcccagacca
tgtcaatttgtttacatccgtggaaagaagatgtttgatcacagacattataagggaaat
tatacagaagaagaagacaaaagattgctaaaatactacaaaaagtatggcccgaaatgg
gagaaaatttctgaaaagacagggcgaagttctacatccgtttgtaaacgacttccacaa
attagttctgttaaaagaaagggaccgtggactcctgaggaggtgcagaggcttttaaag
gctgtgcgtgagcatgttttgtctgtcctgaaatctgcaaaccctaataagaagaaacca
aaaagagtcagaagagaaatactgtacgaaaatttgccctggaccgcaattgctgcgaaa
gttgaaactcgatgttataagacatgcagagaaaaatggatgtccatactctctttgcga
atgtcctcagggactacatttagaggaaaagcaggtctgctggccagaatcagactcatt
aaagcgatgtatgaactgcaagtggaggatgcggcggatattgactggggaagtctcaca
gttgctttcggaaatgttcctccagcacatgttcaaaaaatgtggcacaaaatgaaaaac
tactatgtgccagattggaacagcaggagttttaaagacaatgtctcacatctccacaac
gacattttgccgtgcctcgtgagaagctgcaaaggctttgatgtcaatgcggtccaggta
gagcagaaggaactattccggctatcaaaaatttttaaggacattaaggaagaaagccag
gacattgaggaagatggccaggacattgaggaagatggccaggacattgaggaagatggc
catgatggagatgaagagactggcgagcaggagaacaacagctttaatcaatag
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