Danio rerio (zebrafish): 335474
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Entry
335474 CDS
T01004
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04144
Endocytosis
dre04517
IgSF CAM signaling
dre04530
Tight junction
dre04810
Regulation of actin cytoskeleton
dre05100
Bacterial invasion of epithelial cells
dre05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
335474 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
335474 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
335474 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
335474 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
335474 (arpc1b)
05100 Bacterial invasion of epithelial cells
335474 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
335474 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
335474 (arpc1b)
Membrane trafficking [BR:
dre04131
]
Others
Actin-binding proteins
Arp2/3 complex
335474 (arpc1b)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
335474 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_Aladin
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
eIF2A
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_IFT122_1st
RMC1_N
PEP5_VPS11_N
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Tricorn_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
335474
NCBI-ProteinID:
NP_998321
ZFIN:
ZDB-GENE-030131-7414
Ensembl:
ENSDARG00000027063
UniProt:
Q7T372
LinkDB
All DBs
Position
3:39763779..39775210
Genome browser
AA seq
369 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYNKAGNNWNKIHVLKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGDAWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SVCYFEQDNDWWVCKHIKKPIRSTILCLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEEKP
APTAWGSKMPFGEVMFESTGTSGWVHGVCFSDSGNRVAWASHDSTVAVAEGGKTAVCTSL
TSETLPLLCVTFITENSLVAAGHDCYPVLFVYDSNNAALSFGGKLDVPKQSAQKGMTARE
RFQNLDKKATTESKEAVLESLHKNSISQISLLDGGKAKCSKFCTTGMDGGMTIWDVKTLE
SAMKDLKIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcacagttttcttcttgaacccatcagctgccatgcctggaacaaggaccga
actcaaattgcactgtgtcctaataaccatgaagtgcacatctacaataaggcaggaaac
aactggaacaaaatccacgtgctgaaggaacacaatggccaggttactggcattgattgg
gccccagagagcaatcgcatcgtcacctgcggcactgatcgtaacgcatacgtctggacc
ctgaagggagacgcatggaagcctacactggtcattctcaggatcaaccgtgctgcccgc
tgtgtgaaatggtctccgaaggaaaacaagtttgctgtgggcagcggctcacgtctgatc
tctgtgtgctattttgagcaggataatgactggtgggtgtgcaagcatattaagaagccc
atccgctccaccatcctttgtttggactggcaccccaataatgtcttgttggcagctgga
tcgtgcgactttaaatgcaggatcttttcggcttacataaaggaagtggaggagaagcct
gctccaacagcatggggctctaaaatgcccttcggagaggtcatgtttgaatcaacaggt
acttcaggatgggtgcacggggtctgtttctctgacagtgggaatcgtgtggcgtgggcc
agtcatgacagcaccgtggccgtggcagaaggaggaaaaactgcagtctgtaccagtctg
acttcagaaaccttgcctctgctgtgcgtgactttcatcactgagaacagcctggtggcg
gctggccatgactgctaccctgtgttgtttgtctacgattccaacaatgcagccttgtct
ttcggaggcaaacttgacgtgcccaaacaaagtgctcagaagggaatgacagccagagag
cgcttccagaacctggataagaaagccaccaccgaaagcaaagaagcagtgctggagtct
ctgcacaagaacagcatcagccaaatctcacttcttgatgggggaaaagccaagtgctcc
aaattctgcaccactggaatggatggaggcatgactatttgggatgtaaagacccttgaa
tctgcaatgaaagacctcaagattgtctag
DBGET
integrated database retrieval system
