KEGG   Danio rerio (zebrafish): 337077
Entry
337077            CDS       T01004                                 
Symbol
sdc3
Name
(RefSeq) syndecan-3 isoform X1
  KO
K16337  syndecan 3
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04514  Cell adhesion molecule (CAM) interaction
dre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    337077 (sdc3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    337077 (sdc3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:dre00535]
    337077 (sdc3)
Proteoglycans [BR:dre00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   337077 (sdc3)
SSDB
Motif
Pfam: Syndecan SDH8
Other DBs
NCBI-GeneID: 337077
NCBI-ProteinID: XP_073788033
ZFIN: ZDB-GENE-030131-9021
Ensembl: ENSDARG00000100562
UniProt: A0AC58I1B6
LinkDB
Position
19:46005508..46094151
AA seq 402 aa
MKLPCWITLLLLQTALAQRSKSQPSDDESSGDEPYDDEDFYSGSGSGYPDIKVRPSSVGV
VFTTEEPLPLSTTQATGPAPSASPAAEPSSPPPPEVERESGLGQDVDSKLEIEKKYEEYD
EEEEIRPTRKEQEPDTEKVQEREQDRSKATVAPRLTDVPIVFLGSSTVGGATETTTDLED
LGGREEETDEDLYITKETIVLDPSSETDMITDEITTTEFIPTTIPSTTAKPTRPRPILTT
PSPTAVRPRQPQTTPSRAAPTESSTRSVMTTTQTQVPDETVNNEVAGPGPSGDFEIRENE
VRQNNDLGRGRAVPGEPDLTGNTVDAAGSSAAQLPQKNILERKEVLIAVIVGGVVGALFA
AFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgaagctcccgtgctggataacgttgctgctgctgcagaccgcactggcccagcgcagc
aaatctcaaccaagtgatgatgagagctctggagatgagccttacgatgatgaagacttc
tactctggatccggctctggctatccagatataaaagttagaccgtcttcagtgggcgtg
gttttcactacagaggagcccctcccactctccaccacccaggccacaggccctgccccc
tcggcctctcctgcagcagagccaagcagtccgcctccacccgaggtagagcgggagagc
ggtttgggtcaagatgtcgacagcaaactagaaattgagaaaaagtatgaagagtatgac
gaggaggaagaaattcggccaacgaggaaggagcaggaacctgatactgagaaagtacaa
gagcgagagcaagatcggtcgaaggctacagttgcgccacgactgactgacgttcctata
gtgtttttgggctcctctactgttggtggagccacagagaccactactgacctcgaggat
ctcggcggcagagaagaagaaacagatgaagatctgtatattactaaagaaactatcgtt
ttagatccatccagcgagacagatatgataaccgatgagatcacaaccaccgagtttata
cccaccaccattccatccaccactgctaaaccgaccaggccacgtcctattctgaccact
ccaagccccaccgctgtgcgccccaggcaaccacagaccacgcccagcagagccgctccg
accgagagcagcactcgttcagtgatgaccacaacacagacgcaagtgccagatgaaact
gtaaataatgaagtcgcagggccgggtccaagtggagatttcgaaatccgcgagaatgag
gtccgccagaacaatgatctggggcgaggccgagcggtgccaggagagccggatctgacc
ggaaacacagttgatgctgctggaagttcagctgcacagcttccacagaagaacatcctc
gagaggaaggaggttttgatagcggtgatcgtcggaggtgtagtcggcgctctcttcgcc
gcgttcctggtaatgttactcgtctaccggatgaaaaagaaagacgaaggcagctacaca
ttggaggagcccaaacaagccaccgtcacctaccagaaaccagacaagcaggaggaattc
tacgcctaa

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