Danio rerio (zebrafish): 337077
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Entry
337077 CDS
T01004
Symbol
sdc3
Name
(RefSeq) syndecan-3 isoform X1
KO
K16337
syndecan 3
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04514
Cell adhesion molecule (CAM) interaction
dre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
337077 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
337077 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dre00535
]
337077 (sdc3)
Proteoglycans [BR:
dre00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
337077 (sdc3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
SDH8
Motif
Other DBs
NCBI-GeneID:
337077
NCBI-ProteinID:
XP_073788033
ZFIN:
ZDB-GENE-030131-9021
Ensembl:
ENSDARG00000100562
UniProt:
A0AC58I1B6
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All DBs
Position
19:46005508..46094151
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AA seq
402 aa
AA seq
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MKLPCWITLLLLQTALAQRSKSQPSDDESSGDEPYDDEDFYSGSGSGYPDIKVRPSSVGV
VFTTEEPLPLSTTQATGPAPSASPAAEPSSPPPPEVERESGLGQDVDSKLEIEKKYEEYD
EEEEIRPTRKEQEPDTEKVQEREQDRSKATVAPRLTDVPIVFLGSSTVGGATETTTDLED
LGGREEETDEDLYITKETIVLDPSSETDMITDEITTTEFIPTTIPSTTAKPTRPRPILTT
PSPTAVRPRQPQTTPSRAAPTESSTRSVMTTTQTQVPDETVNNEVAGPGPSGDFEIRENE
VRQNNDLGRGRAVPGEPDLTGNTVDAAGSSAAQLPQKNILERKEVLIAVIVGGVVGALFA
AFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcccgtgctggataacgttgctgctgctgcagaccgcactggcccagcgcagc
aaatctcaaccaagtgatgatgagagctctggagatgagccttacgatgatgaagacttc
tactctggatccggctctggctatccagatataaaagttagaccgtcttcagtgggcgtg
gttttcactacagaggagcccctcccactctccaccacccaggccacaggccctgccccc
tcggcctctcctgcagcagagccaagcagtccgcctccacccgaggtagagcgggagagc
ggtttgggtcaagatgtcgacagcaaactagaaattgagaaaaagtatgaagagtatgac
gaggaggaagaaattcggccaacgaggaaggagcaggaacctgatactgagaaagtacaa
gagcgagagcaagatcggtcgaaggctacagttgcgccacgactgactgacgttcctata
gtgtttttgggctcctctactgttggtggagccacagagaccactactgacctcgaggat
ctcggcggcagagaagaagaaacagatgaagatctgtatattactaaagaaactatcgtt
ttagatccatccagcgagacagatatgataaccgatgagatcacaaccaccgagtttata
cccaccaccattccatccaccactgctaaaccgaccaggccacgtcctattctgaccact
ccaagccccaccgctgtgcgccccaggcaaccacagaccacgcccagcagagccgctccg
accgagagcagcactcgttcagtgatgaccacaacacagacgcaagtgccagatgaaact
gtaaataatgaagtcgcagggccgggtccaagtggagatttcgaaatccgcgagaatgag
gtccgccagaacaatgatctggggcgaggccgagcggtgccaggagagccggatctgacc
ggaaacacagttgatgctgctggaagttcagctgcacagcttccacagaagaacatcctc
gagaggaaggaggttttgatagcggtgatcgtcggaggtgtagtcggcgctctcttcgcc
gcgttcctggtaatgttactcgtctaccggatgaaaaagaaagacgaaggcagctacaca
ttggaggagcccaaacaagccaccgtcacctaccagaaaccagacaagcaggaggaattc
tacgcctaa
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