Danio rerio (zebrafish): 337386
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Entry
337386 CDS
T01004
Symbol
snx1a
Name
(RefSeq) sorting nexin-1a
KO
K17917
sorting nexin-1/2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
337386 (snx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
337386 (snx1a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dre04990
]
337386 (snx1a)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Macropinocytosis
Sorting nexins
337386 (snx1a)
Domain-containing proteins not elsewhere classified [BR:
dre04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
337386 (snx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
MVD-like_N
Motif
Other DBs
NCBI-GeneID:
337386
NCBI-ProteinID:
NP_001122143
ZFIN:
ZDB-GENE-060302-3
Ensembl:
ENSDARG00000071031
UniProt:
F1Q9I7
B3DKJ3
LinkDB
All DBs
Position
25:complement(6016359..6049339)
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AA seq
659 aa
AA seq
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MAASSERSPPPFPDSEEPELLEDSDEGADAFTGTSISEMDSPSPDTTGHSKDIFSDPAED
IFSDPLSDINSEPKKNSDVKIPSPASDEAVDLFSDPLDDDEPSEMSSPEVQNPVPDLSNE
PAEPPKSDNKKPIFEPAAKVKKAASSELFDDDEDLFQESFKPVIKKPQASVPPLDVYTEV
KVKPQVKDDPTDLFTEEALTPPASKPAANTRTNGVHSEEQDLFSEATVELSLDSPHNDRK
KKDSVNPSVSAPAAPVASSSSKPPSKTLEELEEEESEDKFDLNVSITNPEKVGDGMNAYM
VYKVSTQTSLSMFRSKTFTVRRRFSDFLGLYEKLSEKHSQNGYIVPPPPEKSIMGMTKVK
VGKEDPSSAEFVERRRAALERYLQRVVSHPSLLQDPDVREFLEKEELPRAVSTQTLSGAG
FLKMLNKATDAVSKMTIKMNEQDVWFDEKIQDVENEEQLLRKLHVMVESLVNHRKELSGN
TAAFAKSVAMLGSSEDNTALSRALSQLAEVEDRIEQLHRDQAANDFFTFAELLADYIRLL
GAVRGCFDQRMKAWQRWQDAESMLQKKREAEAKLLWANKPDKLQQAKDEIAEWEAKVTQY
ERDFERISATVQKDVIRFDKEKARDFKRQIIKYLESLLHSQQQLIKYWEAFLPEAKAIA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagctcggagcgcagtcctcctcctttcccggactcagaggagcccgaactg
ctggaggacagtgacgagggcgcggacgcgttcacgggcacgtcaatctctgagatggat
tctccatcaccggacacaaccggccattcaaaagacatcttcagcgatccggcggaagac
atcttcagcgatcctctcagcgacattaactccgaacccaagaagaactcggacgtcaag
atcccgtctcctgctagcgatgaagctgttgacctgttcagcgacccgctggatgatgat
gaaccctcagaaatgagttcacccgaagtccaaaatcctgtgccagatctctcaaacgag
cctgcagaaccgccaaagtccgataacaaaaagccgatattcgaacccgctgcaaaagtc
aagaaagcagcgagttcagagctgtttgatgatgatgaggatctgtttcaagagtcattc
aaaccagtgattaagaagcctcaggcctcagtgccgcctctggacgtttatacagaggtg
aaggtcaagccacaggttaaagacgacccaacagatctgttcaccgaagaagcattaacg
ccaccagccagcaaacctgccgcaaacaccaggaccaatggagtgcactctgaggagcag
gatctgttctcagaagctacagtggagttgtctctggacagtcctcataatgaccgcaag
aagaaggactctgtgaacccgtcagtatcggctcctgctgctcctgtagcctccagctcc
agcaaacctccgtccaaaacactcgaggagctggaggaagaggaaagtgaagacaagttt
gatctgaacgtgtccatcacaaatccagagaaagtcggtgatggtatgaacgcatatatg
gtctacaaagtttcaacacagacgtctttatccatgtttcgaagcaagacgttcaccgta
cgcagacgtttcagtgatttcctcggactgtacgaaaagctttcagagaaacactcacag
aacggatacattgtacctcccccgccagagaagagcattatgggaatgacaaaagtgaaa
gtggggaaggaggatccgtcatcggctgagtttgtggagcgaaggagagctgctctagag
aggtatcttcagagggttgtgagtcacccgtctctcctgcaggaccctgatgttcgagag
tttctggagaaagaggagttacccagagcggtcagcacacagactctgagtggagccggt
ttcctcaagatgctcaacaaggccactgatgctgtcagtaagatgaccataaagatgaac
gagcaggacgtgtggtttgacgagaagatccaggatgtagaaaatgaagaacagcttctg
cgcaaacttcacgtcatggtggagtcacttgtaaaccacagaaaagagttgtctgggaac
acggctgcgtttgcgaagagcgtggcgatgttgggcagttcggaggataacactgctctg
tcccgcgctctgtctcagctcgcagaggtggaggatcgaattgaacagctccaccgcgat
caggccgccaacgacttcttcaccttcgctgagcttctggccgattatatacggctactg
ggagccgtcaggggttgttttgatcagaggatgaaagcgtggcagcgctggcaggacgcc
gaaagcatgttgcagaaaaaacgagaggctgaggccaaactcctgtgggccaataaaccc
gacaaactccagcaggccaaggatgagatcgctgagtgggaagcaaaagtcacgcagtat
gagagagacttcgagagaatctcagccaccgtacagaaagatgtcatccgttttgataaa
gagaaagctcgagattttaaaagacaaatcatcaagtatctggagtcactgctgcactcg
caacaacagctgataaaatactgggaggcgtttctgcccgaggcgaaagcaatcgcgtga
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