Danio rerio (zebrafish): 338183
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Entry
338183 CDS
T01004
Symbol
mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00450
Selenocompound metabolism
dre00970
Aminoacyl-tRNA biosynthesis
dre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
338183 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
338183 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dre01007
]
338183 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dre03016
]
338183 (mars1)
Enzymes [BR:
dre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
338183 (mars1)
Amino acid related enzymes [BR:
dre01007
]
Aminoacyl-tRNA synthetase
Class I (U)
338183 (mars1)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
338183 (mars1)
Prokaryotic type
Other AARSs
338183 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_2
GST_N_3
GST_C_3
GST_N_2
Motif
Other DBs
NCBI-GeneID:
338183
NCBI-ProteinID:
NP_956370
ZFIN:
ZDB-GENE-030219-83
Ensembl:
ENSDARG00000034396
UniProt:
A0A8M1PDZ5
Q6TEM5
LinkDB
All DBs
Position
6:complement(58921240..58975022)
Genome browser
AA seq
922 aa
AA seq
DB search
MKLFIGEGNPHCLKVLAALELSGVRCETQLVKHEEKVVPYLTHPVLPILQLPSGQHLFSP
NSICQYLFDISGQKATDATNQWLEWEATNLQPAVLQSLQLVALQGKRVEAAAVMKEPLSW
LEQSLSKRKASFLTDEVVSVADVVLWAALYPLLSDSAFEPGDLQAVRGWFERVCSVSACQ
SAALRVLQGKGAEALKSFLQKQPVTHTPRRDSPSNSTEAEDSERELSPEEIEEAAQVYSE
GLKDFTVVTERKHPVLPQEGKRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYGRLRG
WNLLYICGTDEYGTATENKAREEGLTPQQICDKYHCIHASIYQWFQIDFDFFGRTTTQHQ
TEIAQDIFWRLHERGFLLEDTVEQLRCEGCQRFLADRFVEGECPHCRYPEARGDQCDKCG
RLINAVELKNPQCKVCKETPVIRSSKHLFLNLPKLEQDLEQWLQTSTAAGDWTTNARHIT
RSWLRDGLKPRCITRDLKWGTPVPHPDYKEKVFYVWFDAPIGYLSITANYTDQWERWWKN
PQQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGV
FGDMAKDTGIPSDVWRFYLLYLRPEGQDSAFSWTDMALKNNSELLNNLGNFINRAGMFVS
KFFDGCVPEMLLNDDDKRLIAQVCWELKQYIQLLDKVRIRDALKCILNMSRHGNQYIQLN
EPWKKIKGGAEDRCRAGTVTGVSVNVACLLAAVLEPFMPTVSLSIRSQLQAPESSSRAML
SGPGAFICTLPAGHRIGTVSPLFQKLENEQIEALRKRFGGLQPEEESAGLKTPSNSSVAV
ESKPNAGAAQHTPASVTADPERAKQLTALVAEQGEKVRALKAQKAEKSAIGVEVAKLLDL
KNQLCLAEGKTPEPPAQKTKKK
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtttatcggtgagggaaacccgcactgcctgaaggtgttggcggcgctggag
ctcagcggagtccggtgtgaaactcagctggtgaaacacgaggagaaagtggtcccgtat
ctcacacaccccgtgttgcccatcctgcagttacccagcggtcagcatctcttcagcccc
aacagcatctgccaatatctgtttgacatcagtggtcagaaggcgacagacgcgacaaac
cagtggctggaatgggaggctacaaatttacagcctgcagtgctgcagtctctccagctg
gtggcgctgcaggggaagcgtgtagaagccgctgctgtgatgaaggagcctctgagctgg
ctggagcagagtctgagcaagagaaaggcatcattccttactgacgaggtggtgtcagtg
gcagatgtggtcctctgggcggcgctgtatcctctgctgtcagacagtgcatttgaaccc
ggtgatctgcaggcggtgcgcggctggtttgagcgagtgtgttctgtctctgcgtgtcag
tctgcagctctcagagtcctgcagggtaaaggagccgaagccttgaagagttttctgcag
aaacagcctgtcacacacacaccacgcagagacagtcccagcaacagcactgaggctgag
gacagtgaacgtgagctctcaccggaggagattgaagaagctgcacaggtttattctgaa
ggactcaaagattttacagtcgtcacagagaggaaacacccagttctccctcaggaagga
aagagaaacgtgttgatcaccagcgctctcccgtatgtcaacaatgtgccgcatctggga
aacatcatcggctgcgtcctcagtgctgacgtgttcgccaggtatgggcgtctgcggggc
tggaatctgctgtacatctgcgggacggatgaatacggcacggccaccgagaataaagcc
cgagaggagggtctgacgccgcagcagatctgcgataaatatcactgcatccacgcctcc
atctaccagtggttccagatcgacttcgacttcttcggccgcaccaccacacagcaccag
acagaaatcgctcaggatattttctggcgtctgcacgagcgtggtttcctcctggaggat
acggtggagcagctgcggtgcgaaggctgccagcgctttctggccgaccgcttcgtggag
ggcgagtgtccacactgccgttacccagaagcccgcggggaccagtgcgataaatgcgga
cgcctgatcaacgctgtggagctgaagaatcctcagtgtaaggtgtgtaaggagacgccg
gtgattcgctcctccaaacacctgttcctgaacctgccgaagctggagcaggatctagag
cagtggctgcagacgtcgacggctgctggagactggaccactaatgctcgtcacatcact
cgctcctggctgcgggacggtctgaagccgcgctgcatcacacgtgacttgaagtggggg
acgccggtgccgcaccccgactacaaggagaaggtgttctatgtgtggttcgatgctcct
attggctacctgtccatcactgccaactacaccgaccaatgggagagatggtggaagaac
ccgcagcaggtggagctctataacttcatggcgaaggacaacgttcccttccacagtgtg
gttttcccttgttcacttctcggggctcaagacaactacacactggtcaataacctcatc
gccactgaatacctgaattacgaggacaccaagttctccaagagtcgtggtgttggtgtg
tttggtgacatggcgaaagacaccggtatcccgtcagacgtgtggcgcttttacctgctc
tacctccgtcccgaaggccaggattcagctttctcctggaccgacatggccctcaaaaac
aactctgagctcctcaacaacctggggaacttcatcaacagggctgggatgtttgtgagc
aagtttttcgacggttgtgttcctgagatgctgctgaatgacgacgataagcgactcatc
gctcaggtctgctgggagctcaagcagtacatccagctgctggacaaagtcaggatccga
gacgcgctgaagtgcatcctcaacatgtctcgtcacggcaatcagtacatccagctaaac
gagccctggaagaagattaaaggaggagccgaggacagatgtcgtgcggggactgtgacg
ggtgtgtcagtgaatgtggcgtgtctgctggctgctgtgctggagcccttcatgcccaca
gtgagtctcagcatccgctctcagctccaggctccagagtccagcagcagagccatgctg
agcggccccggggccttcatctgcaccctgcccgccggacaccgcatcggcacggtcagt
cctctgttccaaaagctggagaacgagcagatcgaggctctgaggaagagattcggagga
ctgcagccagaagaggagagcgcaggactgaagactccgagtaacagcagcgttgcagtc
gagagcaaacccaacgctggagctgcacaacacacaccagccagtgtgactgcagatcca
gagagagccaaacaactcacagctttagtggcagaacaaggtgaaaaagttcgagctctg
aaagcacaaaaagccgaaaaatctgccatcggagtagaagtggccaaattattggacctg
aaaaaccaactttgtcttgcggagggcaagaccccggagccgcccgcgcaaaaaaccaag
aagaaataa
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