KEGG   Danio rerio (zebrafish): 368883
Entry
368883            CDS       T01004                                 
Symbol
rab1ab
Name
(RefSeq) ras-related protein Rab-1A
  KO
K07874  Ras-related protein Rab-1A
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    368883 (rab1ab)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    368883 (rab1ab)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    368883 (rab1ab)
   04031 GTP-binding proteins [BR:dre04031]
    368883 (rab1ab)
Membrane trafficking [BR:dre04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    368883 (rab1ab)
 Autophagy
  Other autophagy associated proteins
    368883 (rab1ab)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   368883 (rab1ab)
  Exosomal proteins of other body fluids (saliva and urine)
   368883 (rab1ab)
  Exosomal proteins of colorectal cancer cells
   368883 (rab1ab)
GTP-binding proteins [BR:dre04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    368883 (rab1ab)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB FeoB_N AAA AAA_7 ABC_tran AAA_29 LANC_like AAA_22 AAA_16 Septin AAA_5 Dioxygenase_N CRAL_TRIO_2 TniB
Other DBs
NCBI-GeneID: 368883
NCBI-ProteinID: NP_001007162
ZFIN: ZDB-GENE-030616-564
Ensembl: ENSDARG00000029663
UniProt: Q7ZSZ0 A0A8M1N318
LinkDB
Position
13:27620001..27629544
AA seq 201 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAG
GSEKTMKIESTPVKPASGGCC
NT seq 606 nt   +upstreamnt  +downstreamnt
atgaatcccgaatatgactatttattcaagctgctcttgattggtgactctggtgttgga
aagtcttgccttcttctcagatttgcagatgacacatacacagaaagctacattagcact
atcggtgtggactttaaaataagaactatagaattagacggaaagaccatcaaacttcag
atctgggatacagcagggcaggagaggtttcgcacaatcacatccagctactacagagga
gcacatggaattattgtagtctatgatgttacagatcaggaatctttcaataatgtaaaa
cagtggctacaggagattgaccgctacgccagtgaaaatgtcaacaagttattggttggc
aacaagtgtgacttaacaacaaaaaaagtggtggactacacaacggcaaaggaatttgca
gattcccttggcattcctttcttggaaactagcgctaagaacgccacaaatgtggagcag
gccttcatgaccatggctgccgagatcaagaagaggatgggccctggagccacagccggc
ggctctgaaaaaaccatgaagatcgaaagcactccagtgaagcctgcgtctggaggctgc
tgctga

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