KEGG   Danio rerio (zebrafish): 373080
Entry
373080            CDS       T01004                                 
Symbol
tuba1b
Name
(RefSeq) tubulin alpha-1B chain
  KO
K07374  tubulin alpha
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04145  Phagosome
dre04210  Apoptosis
dre04530  Tight junction
dre04540  Gap junction
dre04814  Motor proteins
dre05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    373080 (tuba1b)
  09143 Cell growth and death
   04210 Apoptosis
    373080 (tuba1b)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    373080 (tuba1b)
   04540 Gap junction
    373080 (tuba1b)
  09142 Cell motility
   04814 Motor proteins
    373080 (tuba1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    373080 (tuba1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    373080 (tuba1b)
   03036 Chromosome and associated proteins [BR:dre03036]
    373080 (tuba1b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dre04812]
    373080 (tuba1b)
   04147 Exosome [BR:dre04147]
    373080 (tuba1b)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     373080 (tuba1b)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     373080 (tuba1b)
Cytoskeleton proteins [BR:dre04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    373080 (tuba1b)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   373080 (tuba1b)
  Exosomal proteins of other body fluids (saliva and urine)
   373080 (tuba1b)
  Exosomal proteins of colorectal cancer cells
   373080 (tuba1b)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 373080
NCBI-ProteinID: NP_919369
ZFIN: ZDB-GENE-030822-1
Ensembl: ENSDARG00000045367
UniProt: B8A516
LinkDB
Position
23:38814954..38817917
AA seq 449 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD
RVRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGAESVEGEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctctatccacgttggtcaggctggagtccagatcggcaatgcctgc
tgggaactgtattgtcttgagcatggcatccagccagatgggcagatgcccagcgacaaa
accatcggaggaggtgatgactccttcaacaccttcttcagtgagactggagctggaaaa
cacgtccccagggctgtctttgtagacctggagcccactgtcattgatgaggtgcgcact
gggacataccgtcagctgttccaccctgagcagctcatcacaggaaaggaagatgctgct
aataactatgctcgtggtcactacactattggcaaggagctcattgaccttgttttagat
agggttcgcaaactggctgaccagtgcacaggtctccagggtttcctggtcttccacagc
tttggtggtggcaccggttctggcttcacctctctgctgatggagcgtctgtctgtcgac
tacggcaagaagtccaagcttgagttctccatctaccccgctcctcaggtctccaccgct
gtggtagagccttacaactccatcctgaccacccacaccaccctagagcactctgactgt
gccttcatggtagacaatgaggccatttatgatatctgccgtaggaaccttgacattgag
cgtcctacttacaccaacctcaacaggctgatcagtcagattgtgtcctccatcacagcc
tcccttaggtttgatggtgccctcaatgtggatctcactgagttccagaccaacttggtg
ccctatcctcgtatccacttccctctggctacctatgccccagtgatctccgcagagaag
gcttaccatgagcagctctctgtgtctgaaatcaccaatgcttgcttcgagccggccaat
cagatggtcaaatgcgacccacgtcacggcaagtacatggcctgctgtctgctgtaccgt
ggtgacgtggtacccaaagatgtgaacgccgcaatcgccaccatcaagaccaagcgcacc
atccagtttgtggactggtgtcccactggtttcaaggttggcatcaactaccagcctccc
actgtggttccaggtggtgatctggctaaagtgcagagggccgtgtgcatgctgagcaac
accacagctattgctgaggcctgggctcgtctggatcataagtttgatctgatgtacgcc
aagcgcgcctttgtgcactggtacgtgggtgagggtatggaggagggcgagttctctgag
gccagagaggacatggctgccctggagaaagattatgaggaggttggagctgagagtgtg
gaaggagaagatgagggtgaggaatattag

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