Danio rerio (zebrafish): 373100
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Entry
373100 CDS
T01004
Symbol
ssr1
Name
(RefSeq) translocon-associated protein subunit alpha precursor
KO
K13249
translocon-associated protein subunit alpha
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
373100 (ssr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
373100 (ssr1)
Membrane trafficking [BR:
dre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
TRAP complex
373100 (ssr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAP_alpha
Nop14
IFT57
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
373100
NCBI-ProteinID:
NP_958484
ZFIN:
ZDB-GENE-030826-28
Ensembl:
ENSDARG00000101627
UniProt:
Q8AWW3
LinkDB
All DBs
Position
24:complement(42080255..42090640)
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AA seq
290 aa
AA seq
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MKLLQKLLLLLLLAFPATLMLKGPVVSAQDATEEEEAVDEDAGDDVLAEDEDDEAEVEDD
ENTELTEEKEEEEEEALVGEVKASPNADTTILFVKGEDFPANNIVKFLLGFSNKGSENFV
VESLDASFRYPQDFQFYIQNFTALQLGTLVPPQRQATFEYSFIPAEPMGGRPFGLVINLN
YRDDSGNVFQDAVFNQTVTITEREDGLDGETIFMYVFLSGLGLLLVIGLHQLLESRKRRR
PAAKVEMGTSNHNDVDMSWIPQETLNQINKASPRRSPRKRTQKRSAGSDE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctgcagaaactgctgctgctgctcctgctggcgtttcccgccacgctgatg
ctgaagggtcctgtagtgtctgctcaggacgccactgaggaagaggaggctgtggatgaa
gatgctggtgatgatgtgctggcggaggatgaggatgatgaagccgaggtggaggacgat
gagaacactgagctgacggaagagaaagaggaagaggaagaagaagctctagtgggagag
gtgaaggcttcacccaacgcagacacaaccatcctgttcgtcaaaggagaagattttcca
gctaacaacatcgtgaagttcctgctgggcttcagcaataagggctcggagaactttgtg
gtggagtctctggacgcctcgttccgttacccgcaggacttccagttctacatccagaac
ttcacggcgctgcagctgggcacactggtccctccacagcgccaggccaccttcgagtac
tccttcatccccgctgagcccatgggcggacgacccttcggcctcgtcatcaacctcaac
tacagggacgacagtggaaacgttttccaggacgccgtcttcaaccagactgtcaccatc
acagagagagaggacggcctggacggagaaacgatcttcatgtacgtgttcctctcgggt
ctcggcctgctattggtcatcggtcttcatcagctgcttgaatcacgcaagaggagacgg
cctgcagctaaagtggagatgggcacatccaaccacaatgatgtggacatgagctggatc
ccacaggaaacactcaaccagatcaataaagcgtctcccagacggtctccgcgtaagagg
actcagaagcgctccgccggctcagacgagtga
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