Danio rerio (zebrafish): 378452
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Entry
378452 CDS
T01004
Symbol
cdh17
Name
(RefSeq) cadherin-17 precursor
KO
K06811
cadherin 17, LI cadherin
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
378452 (cdh17)
Cell adhesion molecules [BR:
dre04515
]
Cadherins
Major cadherins
378452 (cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RibLong
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
378452
NCBI-ProteinID:
NP_001410625
ZFIN:
ZDB-GENE-030910-3
Ensembl:
ENSDARG00000005112
UniProt:
A0AB13A8W0
LinkDB
All DBs
Position
16:26774177..26802798
Genome browser
AA seq
868 aa
AA seq
DB search
MRGALLLHLTLLVSIGHGIDLEDKKGPLIDMVLDVPEATPVPYAFFKFTSAVEDVSSYHV
SGETEDKVRISSDGWLYLEQPLEWSPEKKHHLLIEALSEDGKTLDGPARVVLQVIDVNNN
PPVFSESQYSGSVREHSPAGVPFVQVFASDADDPNTENTQLRFSIVNQIPIVGQTFFFGI
NPNNGQIFTTEEGAEFLKARPSVTYSRGEVRGSPDVLKKKFEDYCIPKNNIALENNPFYK
CVERAERRTVNVLQDPDYALIVRAEDLGGNAVNSLSSTTRVNIAILQNLWVSPGPITIIE
NTDEEYPMYLATMRANNPTALYRLEQKERLSFPFTINQDGDIYVTGPLDREEKEMYILVV
IAEDEQGVELEKPMEIPVLVQDVNDNPPICDEALFEVQEKEPVGNSIGHLPAHDNDKEGT
LSSALTYTLRSQTPTKPSDKMFSIDPNTGEIKVANQNFQRKQVPQYELTFEVTDQVYLTK
CKAIIKVIDINDEIPIFEKNDYGTYSVPELAEVGTTLLNIKATDADDTGTGSSRVEYHIT
AGDPQNLFAIEVDEETGEGRVYIAQPLDYELQSVYNLKIDARNPEPLIAGVEYNDSSTTS
VVIELVDVDEPPKFEVEGLNVNVPENITVGTLLMKAEAKDPEGKTIKFKMEGDEHKWLEL
NVDTGELKTKAALDRETVDHLTLTITAYETEGNKMEAEMKVDIHLQDVNDNYPKLQKTQG
FICLQDMTPLTLTAMDKDADPYGEPFTFAISRKSQNFEIKPVDGTSAKLILKKKPSTEQN
VTVPINILDNAGLGITQKFDVRICNCTKLGYCYIEPASHSWKLSMGSTIGILAGVFGVIG
LFLGICLYQIKKKDKQRATAEGETKAML
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtgcacttttgctacacttgacccttctcgtcagcattggtcatgggattgat
ctagaggacaaaaaggggccattaatagatatggttttagatgtgccagaggctacacct
gtgccttatgccttcttcaagtttacatctgcagttgaagacgtttcttcataccatgta
agcggagagaccgaagataaggtcaggatctcctcggacggctggctgtacttggagcaa
cctctggaatggagccctgagaaaaaacaccatctacttattgaagcactttcagaagat
ggtaaaactcttgatgggcctgcccgggttgtactgcaagtgattgatgtcaataacaat
cctcctgtctttagtgagagtcagtacagtggcagtgttagagagcactctcctgcagga
gttccattcgtgcaggtgtttgcttcagatgcggatgatcccaacacagaaaacactcag
ctgaggttcagcattgtaaatcaaatccccattgtcgggcaaacatttttctttggcata
aatccaaacaatggacagatatttacaacagaagaaggagcagagtttctgaaggccaga
cctagcgtaacgtacagccgtggggaggttcgaggcagtcctgacgtcctgaagaaaaag
tttgaggactattgtattccaaagaacaacattgcactggagaacaaccccttttacaaa
tgtgttgaacgtgcagaaagaagaacagtgaatgttctccaggatcctgactatgcactg
attgttcgggctgaggatttgggaggcaacgctgtgaactcattgagcagtacgacacgg
gtcaatatagccatccttcaaaacctctgggtcagtcctggaccaatcaccattatagaa
aatacagatgaggaataccctatgtatcttgccacaatgagagcaaataatcccactgca
ctgtacagactggaacagaaagaaagactttccttccccttcaccatcaatcaggatgga
gacatttatgttaccggtccactggacagagaagagaaagaaatgtacatactggtagtc
atagcagaagatgaacagggtgtggagctggaaaaacccatggagattcctgtgctggtg
caggatgtcaatgacaaccctcctatatgtgatgaagctttgtttgaggtgcaggaaaag
gagcccgtaggtaattcgattggtcatctgcctgctcatgacaatgataaagagggtaca
ctaagctcagctttaacctacactctccggagccagacacccaccaagccaagtgacaaa
atgttctccatcgacccaaacactggtgaaatcaaagtggccaatcaaaacttccagaga
aaacaagtgcctcagtatgagctcacctttgaagtgactgatcaagtttacctcacgaaa
tgtaaagcaatcatcaaggtgatcgatatcaatgatgagatccctatcttcgagaaaaac
gattatggaacttacagtgttcccgaactggctgaagtgggcacaactttgctcaacatt
aaagccacagatgcggatgatacaggaacaggaagctctagagtggagtatcacatcaca
gctggagaccctcagaacctcttcgccattgaggttgatgaagagactggagagggcaga
gtctacatcgctcagccactggattatgagctccagagcgtctacaatcttaagattgat
gcccgtaatcccgagcccctgatcgcaggagtggaatataatgacagttccactacatct
gttgtcattgagctggtggacgtggatgagcctccaaagtttgaagtggaggggcttaat
gtcaatgtgccagaaaacatcacggttggaaccctactaatgaaagctgaagccaaggat
cccgagggaaagactatcaagtttaagatggaaggagatgaacacaagtggttggagctg
aatgttgacactggagagctgaagactaaagcagcgttggacagagagacagtggatcat
ctcactctcacaatcaccgcttatgagaccgagggaaacaagatggaggctgagatgaag
gtggacattcatctgcaggatgtaaacgacaactaccctaaactccagaagacacagggc
ttcatctgccttcaggacatgacccccttgaccctcactgctatggataaggacgcagac
ccctacggagagcccttcacgttcgccatcagccgaaaatcacaaaactttgagatcaaa
cctgtggatggaacctcagcgaaactgatcctgaagaagaaaccctcgactgaacagaac
gtcactgttcctatcaacatcttagacaacgctgggcttggcatcacacaaaagtttgat
gtgcgtatttgtaactgcactaaattgggctactgttacatcgagccagcttctcacagc
tggaaactaagcatgggcagcaccatcggcatcctggcaggagtattcggcgtcattggt
ttgttcttgggcatttgtttgtatcaaatcaaaaagaaagataagcagagagccacagct
gaaggagagaccaaagctatgctctaa
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